RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 MYL1P05976 194 aa15.76■□□□□ 0.11
COL3A1-203ENST00000450867 MCF2P10911 925 aa15.76■□□□□ 0.11
COL3A1-203ENST00000450867 LAG3P18627 525 aa15.76■□□□□ 0.11
COL3A1-203ENST00000450867 CTNNB1P35222 781 aa15.76■□□□□ 0.11
COL3A1-203ENST00000450867 NDUFA8P51970 172 aa15.76■□□□□ 0.11
COL3A1-203ENST00000450867 ALCAMQ13740 583 aa15.76■□□□□ 0.11
COL3A1-203ENST00000450867 CSPP1Q1MSJ5 1256 aa15.76■□□□□ 0.11
COL3A1-203ENST00000450867 MPZL3Q6UWV2 235 aa15.76■□□□□ 0.11
COL3A1-203ENST00000450867 CCDC65Q8IXS2 484 aa15.76■□□□□ 0.11
COL3A1-203ENST00000450867 GAS2L1Q99501 681 aaPredicted RBP15.76■□□□□ 0.11
COL3A1-203ENST00000450867 C11orf84Q9BUA3 381 aaPredicted RBP15.76■□□□□ 0.11
COL3A1-203ENST00000450867 TARS2Q9BW92 718 aaKnown RBP15.76■□□□□ 0.11
COL3A1-203ENST00000450867 CDT1Q9H211 546 aa15.76■□□□□ 0.11
COL3A1-203ENST00000450867 RNF39Q9H2S5 420 aa15.76■□□□□ 0.11
COL3A1-203ENST00000450867 GOLPH3LQ9H4A5 285 aa15.76■□□□□ 0.11
COL3A1-203ENST00000450867 CERS4Q9HA82 394 aa15.76■□□□□ 0.11
COL3A1-203ENST00000450867 TSHZ2Q9NRE2 1034 aa15.76■□□□□ 0.11
COL3A1-203ENST00000450867 TBC1D13Q9NVG8 400 aa15.76■□□□□ 0.11
COL3A1-203ENST00000450867 SERTAD1Q9UHV2 236 aa15.76■□□□□ 0.11
COL3A1-203ENST00000450867 HES2Q9Y543 173 aa15.76■□□□□ 0.11
COL3A1-203ENST00000450867 ARL5CA6NH57 179 aa15.75■□□□□ 0.11
COL3A1-203ENST00000450867 LIG1P18858 919 aa15.75■□□□□ 0.11
COL3A1-203ENST00000450867 IBSPP21815 317 aaPredicted RBP15.75■□□□□ 0.11
COL3A1-203ENST00000450867 NMT1P30419 496 aaKnown RBP15.75■□□□□ 0.11
COL3A1-203ENST00000450867 SYKP43405 635 aa15.75■□□□□ 0.11
COL3A1-203ENST00000450867 LONRF3Q496Y0 759 aa15.75■□□□□ 0.11
COL3A1-203ENST00000450867 CEP57L1Q8IYX8 460 aa15.75■□□□□ 0.11
COL3A1-203ENST00000450867 FSIP1Q8NA03 581 aa15.75■□□□□ 0.11
COL3A1-203ENST00000450867 COLGALT1Q8NBJ5 622 aa15.75■□□□□ 0.11
COL3A1-203ENST00000450867 TMEM87AQ8NBN3 555 aa15.75■□□□□ 0.11
COL3A1-203ENST00000450867 GSTCDQ8NEC7 633 aa15.75■□□□□ 0.11
COL3A1-203ENST00000450867 STAMQ92783 540 aa15.75■□□□□ 0.11
COL3A1-203ENST00000450867 ZHX3Q9H4I2 956 aa15.75■□□□□ 0.11
COL3A1-203ENST00000450867 AAASQ9NRG9 546 aa15.75■□□□□ 0.11
COL3A1-203ENST00000450867 PANK4Q9NVE7 773 aa15.75■□□□□ 0.11
COL3A1-203ENST00000450867 KANSL3Q9P2N6 904 aa15.75■□□□□ 0.11
COL3A1-203ENST00000450867 HCSTQ9UBK5 93 aa15.75■□□□□ 0.11
COL3A1-203ENST00000450867 PVALEFA0A1B0GWK0 134 aa15.74■□□□□ 0.11
COL3A1-203ENST00000450867 IDEP14735 1019 aa15.74■□□□□ 0.11
COL3A1-203ENST00000450867 FOSL2P15408 326 aa15.74■□□□□ 0.11
COL3A1-203ENST00000450867 GRM5P41594 1212 aa15.74■□□□□ 0.11
COL3A1-203ENST00000450867 AFF1P51825 1210 aaKnown RBP15.74■□□□□ 0.11
COL3A1-203ENST00000450867 MCL1Q07820 350 aa15.74■□□□□ 0.11
COL3A1-203ENST00000450867 DSC1Q08554 894 aa15.74■□□□□ 0.11
COL3A1-203ENST00000450867 COASYQ13057 564 aa15.74■□□□□ 0.11
COL3A1-203ENST00000450867 TMEM132AQ24JP5 1023 aa15.74■□□□□ 0.11
COL3A1-203ENST00000450867 ZNF568Q3ZCX4 644 aa15.74■□□□□ 0.11
COL3A1-203ENST00000450867 HERC4Q5GLZ8 1057 aaPredicted RBP15.74■□□□□ 0.11
COL3A1-203ENST00000450867 UNC13DQ70J99 1090 aa15.74■□□□□ 0.11
COL3A1-203ENST00000450867 URGCPQ8TCY9 931 aa15.74■□□□□ 0.11
COL3A1-203ENST00000450867 GDPD5Q8WTR4 605 aa15.74■□□□□ 0.11
COL3A1-203ENST00000450867 LMAN2LQ9H0V9 348 aa15.74■□□□□ 0.11
COL3A1-203ENST00000450867 MTUS1Q9ULD2 1270 aa15.74■□□□□ 0.11
COL3A1-203ENST00000450867 PCDHB12Q9Y5F1 795 aa15.74■□□□□ 0.11
COL3A1-203ENST00000450867 STYXL1Q9Y6J8 313 aa15.74■□□□□ 0.11
COL3A1-203ENST00000450867 EYSQ5T1H1 3165 aa15.73■□□□□ 0.11
COL3A1-203ENST00000450867 RFXAPO00287 272 aa15.73■□□□□ 0.11
COL3A1-203ENST00000450867 HNRNPDLO14979 420 aaKnown RBP15.73■□□□□ 0.11
COL3A1-203ENST00000450867 FAM189A1O60320 539 aa15.73■□□□□ 0.11
COL3A1-203ENST00000450867 PPM1AP35813 382 aa15.73■□□□□ 0.11
COL3A1-203ENST00000450867 MLH1P40692 756 aa15.73■□□□□ 0.11
COL3A1-203ENST00000450867 ASIC1P78348 528 aa15.73■□□□□ 0.11
COL3A1-203ENST00000450867 UBE3AQ05086 875 aa15.73■□□□□ 0.11
COL3A1-203ENST00000450867 GPM6BQ13491 265 aa15.73■□□□□ 0.11
COL3A1-203ENST00000450867 NOLC1Q14978 699 aaKnown RBP eCLIP15.73■□□□□ 0.11
COL3A1-203ENST00000450867 ZC2HC1CQ53FD0 456 aaPredicted RBP15.73■□□□□ 0.11
COL3A1-203ENST00000450867 XKR4Q5GH76 650 aa15.73■□□□□ 0.11
COL3A1-203ENST00000450867 L1TD1Q5T7N2 865 aaKnown RBP15.73■□□□□ 0.11
COL3A1-203ENST00000450867 SLC39A4Q6P5W5 647 aa15.73■□□□□ 0.11
COL3A1-203ENST00000450867 KCNT2Q6UVM3 1135 aa15.73■□□□□ 0.11
COL3A1-203ENST00000450867 CLEC17AQ6ZS10 378 aa15.73■□□□□ 0.11
COL3A1-203ENST00000450867 FMR1NBQ8N0W7 255 aaPredicted RBP15.73■□□□□ 0.11
COL3A1-203ENST00000450867 ENGASEQ8NFI3 743 aa15.73■□□□□ 0.11
COL3A1-203ENST00000450867 PAGE5Q96GU1 130 aa15.73■□□□□ 0.11
COL3A1-203ENST00000450867 ZNF558Q96NG5 402 aa15.73■□□□□ 0.11
COL3A1-203ENST00000450867 IPO9Q96P70 1041 aaKnown RBP15.73■□□□□ 0.11
COL3A1-203ENST00000450867 GAD1Q99259 594 aa15.73■□□□□ 0.11
COL3A1-203ENST00000450867 HAPLN2Q9GZV7 340 aa15.73■□□□□ 0.11
COL3A1-203ENST00000450867 MRPL44Q9H9J2 332 aaKnown RBP15.73■□□□□ 0.11
COL3A1-203ENST00000450867 SNTG2Q9NY99 539 aa15.73■□□□□ 0.11
COL3A1-203ENST00000450867 PLAGL2Q9UPG8 496 aa15.73■□□□□ 0.11
COL3A1-203ENST00000450867 LZTS1Q9Y250 596 aa15.73■□□□□ 0.11
COL3A1-203ENST00000450867 PCDHB13Q9Y5F0 798 aa15.73■□□□□ 0.11
COL3A1-203ENST00000450867 MTCH2Q9Y6C9 303 aa15.73■□□□□ 0.11
COL3A1-203ENST00000450867 CLDN3O15551 220 aa15.72■□□□□ 0.11
COL3A1-203ENST00000450867 GTPBP6O43824 516 aaPredicted RBP15.72■□□□□ 0.11
COL3A1-203ENST00000450867 KLRC4O43908 158 aa15.72■□□□□ 0.11
COL3A1-203ENST00000450867 B4GALT3O60512 393 aa15.72■□□□□ 0.11
COL3A1-203ENST00000450867 RECQL4O94761 1208 aa15.72■□□□□ 0.11
COL3A1-203ENST00000450867 ZNF202O95125 648 aa15.72■□□□□ 0.11
COL3A1-203ENST00000450867 ITGB1P05556 798 aa15.72■□□□□ 0.11
COL3A1-203ENST00000450867 AKAP5P24588 427 aa15.72■□□□□ 0.11
COL3A1-203ENST00000450867 CASP5P51878 434 aa15.72■□□□□ 0.11
COL3A1-203ENST00000450867 PLCB3Q01970 1234 aa15.72■□□□□ 0.11
COL3A1-203ENST00000450867 CUL4BQ13620 913 aa15.72■□□□□ 0.11
COL3A1-203ENST00000450867 NAB2Q15742 525 aa15.72■□□□□ 0.11
COL3A1-203ENST00000450867 ALKAL1Q6UXT8 129 aa15.72■□□□□ 0.11
COL3A1-203ENST00000450867 KRBA2Q6ZNG9 492 aa15.72■□□□□ 0.11
COL3A1-203ENST00000450867 EPM2AIP1Q7L775 607 aaPredicted RBP15.72■□□□□ 0.11
COL3A1-203ENST00000450867 SLC39A11Q8N1S5 342 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms