RNA–Protein interactions for RNA: ENST00000450277.2

CCDC144B-203, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 2

Gene CCDC144B, Length 689 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-203ENST00000450277 LONP2Q86WA8 852 aa12.87□□□□□ -0.35
CCDC144B-203ENST00000450277 LRRC71Q8N4P6 559 aa12.87□□□□□ -0.35
CCDC144B-203ENST00000450277 FAM160A2Q8N612 972 aaPredicted RBP12.87□□□□□ -0.35
CCDC144B-203ENST00000450277 NLRP7Q8WX94 980 aa12.87□□□□□ -0.35
CCDC144B-203ENST00000450277 DNASE1L2Q92874 299 aa12.87□□□□□ -0.35
CCDC144B-203ENST00000450277 ZNF668Q96K58 619 aaPredicted RBP12.87□□□□□ -0.35
CCDC144B-203ENST00000450277 MBOAT7Q96N66 472 aa12.87□□□□□ -0.35
CCDC144B-203ENST00000450277 MAP3K14Q99558 947 aa12.87□□□□□ -0.35
CCDC144B-203ENST00000450277 KXD1Q9BQD3 176 aa12.87□□□□□ -0.35
CCDC144B-203ENST00000450277 GCOM2Q9BZD3 368 aaPredicted RBP12.87□□□□□ -0.35
CCDC144B-203ENST00000450277 HEBP1Q9NRV9 189 aa12.87□□□□□ -0.35
CCDC144B-203ENST00000450277 CHST7Q9NS84 486 aa12.87□□□□□ -0.35
CCDC144B-203ENST00000450277 MARCH5Q9NX47 278 aa12.87□□□□□ -0.35
CCDC144B-203ENST00000450277 FNIP2Q9P278 1114 aa12.87□□□□□ -0.35
CCDC144B-203ENST00000450277 WASF3Q9UPY6 502 aa12.87□□□□□ -0.35
CCDC144B-203ENST00000450277 RBM8AQ9Y5S9 174 aaKnown RBP12.87□□□□□ -0.35
CCDC144B-203ENST00000450277 TDRD15B5MCY1 1934 aaKnown RBP12.87□□□□□ -0.35
CCDC144B-203ENST00000450277 AKAP13Q12802 2813 aa12.87□□□□□ -0.35
CCDC144B-203ENST00000450277 NOTCH4Q99466 2003 aa12.86□□□□□ -0.35
CCDC144B-203ENST00000450277 ADAMTS20P59510 1910 aa12.86□□□□□ -0.35
CCDC144B-203ENST00000450277 LAMA1P25391 3075 aa12.86□□□□□ -0.35
CCDC144B-203ENST00000450277 ITPR1Q14643 2758 aa12.86□□□□□ -0.35
CCDC144B-203ENST00000450277 E7EWF7 191 aa12.86□□□□□ -0.35
CCDC144B-203ENST00000450277 DDX39AO00148 427 aaKnown RBP12.86□□□□□ -0.35
CCDC144B-203ENST00000450277 MEIS1O00470 390 aa12.86□□□□□ -0.35
CCDC144B-203ENST00000450277 CDC45O75419 566 aa12.86□□□□□ -0.35
CCDC144B-203ENST00000450277 HNRNPA1P09651 372 aaKnown RBP eCLIP12.86□□□□□ -0.35
CCDC144B-203ENST00000450277 SFPQP23246 707 aaKnown RBP eCLIP12.86□□□□□ -0.35
CCDC144B-203ENST00000450277 NECTIN1Q15223 517 aa12.86□□□□□ -0.35
CCDC144B-203ENST00000450277 SF3A2Q15428 464 aaKnown RBP12.86□□□□□ -0.35
CCDC144B-203ENST00000450277 PSAPL1Q6NUJ1 521 aa12.86□□□□□ -0.35
CCDC144B-203ENST00000450277 CATIPQ7Z7H3 387 aa12.86□□□□□ -0.35
CCDC144B-203ENST00000450277 GATA6Q92908 595 aa12.86□□□□□ -0.35
CCDC144B-203ENST00000450277 LOXL4Q96JB6 756 aa12.86□□□□□ -0.35
CCDC144B-203ENST00000450277 FAM167AQ96KS9 214 aa12.86□□□□□ -0.35
CCDC144B-203ENST00000450277 INO80BQ9C086 356 aaPredicted RBP12.86□□□□□ -0.35
CCDC144B-203ENST00000450277 HELZ2Q9BYK8 2649 aaKnown RBP12.86□□□□□ -0.35
CCDC144B-203ENST00000450277 CNTNAP2Q9UHC6 1331 aa12.86□□□□□ -0.35
CCDC144B-203ENST00000450277 MAST4O15021 2626 aa12.85□□□□□ -0.35
CCDC144B-203ENST00000450277 CHURC1-FNTBB4DL54 471 aa12.85□□□□□ -0.35
CCDC144B-203ENST00000450277 IFIT3O14879 490 aaKnown RBP12.85□□□□□ -0.35
CCDC144B-203ENST00000450277 ECI2O75521 394 aa12.85□□□□□ -0.35
CCDC144B-203ENST00000450277 FNTBP49356 437 aa12.85□□□□□ -0.35
CCDC144B-203ENST00000450277 CREMQ03060 361 aa12.85□□□□□ -0.35
CCDC144B-203ENST00000450277 FOXC1Q12948 553 aa12.85□□□□□ -0.35
CCDC144B-203ENST00000450277 CASC1Q6TDU7 716 aa12.85□□□□□ -0.35
CCDC144B-203ENST00000450277 AGMOQ6ZNB7 445 aa12.85□□□□□ -0.35
CCDC144B-203ENST00000450277 TEX2Q8IWB9 1127 aa12.85□□□□□ -0.35
CCDC144B-203ENST00000450277 NCOA7Q8NI08 942 aa12.85□□□□□ -0.35
CCDC144B-203ENST00000450277 ZCCHC14Q8WYQ9 949 aaKnown RBP12.85□□□□□ -0.35
CCDC144B-203ENST00000450277 LZTS2Q9BRK4 669 aa12.85□□□□□ -0.35
CCDC144B-203ENST00000450277 MTA3Q9BTC8 594 aa12.85□□□□□ -0.35
CCDC144B-203ENST00000450277 RSAD1Q9HA92 442 aa12.85□□□□□ -0.35
CCDC144B-203ENST00000450277 LMAN1LQ9HAT1 526 aa12.85□□□□□ -0.35
CCDC144B-203ENST00000450277 NDRG2Q9UN36 371 aaKnown RBP12.85□□□□□ -0.35
CCDC144B-203ENST00000450277 PIN4Q9Y237 131 aaKnown RBP12.85□□□□□ -0.35
CCDC144B-203ENST00000450277 DHX15O43143 795 aaKnown RBP12.84□□□□□ -0.35
CCDC144B-203ENST00000450277 CSDE1O75534 798 aaKnown RBP12.84□□□□□ -0.35
CCDC144B-203ENST00000450277 PAPSS2O95340 614 aaPredicted RBP12.84□□□□□ -0.35
CCDC144B-203ENST00000450277 HOXA9P31269 272 aa12.84□□□□□ -0.35
CCDC144B-203ENST00000450277 NTHL1P78549 312 aa12.84□□□□□ -0.35
CCDC144B-203ENST00000450277 SATB1Q01826 763 aa12.84□□□□□ -0.35
CCDC144B-203ENST00000450277 SRSF5Q13243 272 aaKnown RBP12.84□□□□□ -0.35
CCDC144B-203ENST00000450277 CEP68Q76N32 757 aa12.84□□□□□ -0.35
CCDC144B-203ENST00000450277 NIPA1Q7RTP0 329 aa12.84□□□□□ -0.35
CCDC144B-203ENST00000450277 TRMT1LQ7Z2T5 733 aaKnown RBP12.84□□□□□ -0.35
CCDC144B-203ENST00000450277 MRPL10Q7Z7H8 261 aaKnown RBP12.84□□□□□ -0.35
CCDC144B-203ENST00000450277 SMAP1Q8IYB5 467 aaPredicted RBP12.84□□□□□ -0.35
CCDC144B-203ENST00000450277 CTCFLQ8NI51 663 aaPredicted RBP12.84□□□□□ -0.35
CCDC144B-203ENST00000450277 ARRDC1-AS1Q9H2J1 176 aa12.84□□□□□ -0.35
CCDC144B-203ENST00000450277 SENP2Q9HC62 589 aa12.84□□□□□ -0.35
CCDC144B-203ENST00000450277 KCNH3Q9ULD8 1083 aa12.84□□□□□ -0.35
CCDC144B-203ENST00000450277 PRG3Q9Y2Y8 225 aaPredicted RBP12.84□□□□□ -0.35
CCDC144B-203ENST00000450277 TAF6LQ9Y6J9 622 aa12.84□□□□□ -0.35
CCDC144B-203ENST00000450277 LOC400499M0QZD8 3231 aa12.84□□□□□ -0.35
CCDC144B-203ENST00000450277 LAMA5O15230 3695 aa12.83□□□□□ -0.36
CCDC144B-203ENST00000450277 COL4A2P08572 1712 aa12.83□□□□□ -0.36
CCDC144B-203ENST00000450277 SLC27A2O14975 620 aa12.83□□□□□ -0.36
CCDC144B-203ENST00000450277 FOSP01100 380 aaPredicted RBP12.83□□□□□ -0.36
CCDC144B-203ENST00000450277 POMCP01189 267 aa12.83□□□□□ -0.36
CCDC144B-203ENST00000450277 OR1G1P47890 313 aa12.83□□□□□ -0.36
CCDC144B-203ENST00000450277 GNAQP50148 359 aa12.83□□□□□ -0.36
CCDC144B-203ENST00000450277 NOVA1P51513 510 aaKnown RBP12.83□□□□□ -0.36
CCDC144B-203ENST00000450277 AFF1P51825 1210 aaKnown RBP12.83□□□□□ -0.36
CCDC144B-203ENST00000450277 ZNF252P-AS1Q0IIN9 211 aa12.83□□□□□ -0.36
CCDC144B-203ENST00000450277 SART3Q15020 963 aaKnown RBP12.83□□□□□ -0.36
CCDC144B-203ENST00000450277 USP41Q3LFD5 358 aa12.83□□□□□ -0.36
CCDC144B-203ENST00000450277 TSGA10IPQ3SY00 556 aa12.83□□□□□ -0.36
CCDC144B-203ENST00000450277 LIN9Q5TKA1 542 aa12.83□□□□□ -0.36
CCDC144B-203ENST00000450277 CREB3L3Q68CJ9 461 aa12.83□□□□□ -0.36
CCDC144B-203ENST00000450277 ZNF746Q6NUN9 644 aaPredicted RBP12.83□□□□□ -0.36
CCDC144B-203ENST00000450277 RALYLQ86SE5 291 aaKnown RBP12.83□□□□□ -0.36
CCDC144B-203ENST00000450277 NPAS3Q8IXF0 933 aa12.83□□□□□ -0.36
CCDC144B-203ENST00000450277 MB21D2Q8IYB1 491 aaPredicted RBP12.83□□□□□ -0.36
CCDC144B-203ENST00000450277 COLGALT2Q8IYK4 626 aa12.83□□□□□ -0.36
CCDC144B-203ENST00000450277 SPEM1Q8N4L4 309 aa12.83□□□□□ -0.36
CCDC144B-203ENST00000450277 ITFG1Q8TB96 612 aa12.83□□□□□ -0.36
CCDC144B-203ENST00000450277 ANO2Q9NQ90 1003 aa12.83□□□□□ -0.36
CCDC144B-203ENST00000450277 NRBP2Q9NSY0 501 aa12.83□□□□□ -0.36
CCDC144B-203ENST00000450277 FBXW11Q9UKB1 542 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms