RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 PTPRHQ9HD43 1115 aa11.67□□□□□ -0.54
SMPD4-211ENST00000449159 TMEM161AQ9NX61 479 aa11.67□□□□□ -0.54
SMPD4-211ENST00000449159 ANKFY1Q9P2R3 1169 aa11.67□□□□□ -0.54
SMPD4-211ENST00000449159 MSRAQ9UJ68 235 aa11.67□□□□□ -0.54
SMPD4-211ENST00000449159 LRFN2Q9ULH4 789 aa11.67□□□□□ -0.54
SMPD4-211ENST00000449159 IPPQ9Y573 584 aa11.67□□□□□ -0.54
SMPD4-211ENST00000449159 PCDHB7Q9Y5E2 793 aa11.67□□□□□ -0.54
SMPD4-211ENST00000449159 PDCD11Q14690 1871 aaKnown RBP11.67□□□□□ -0.54
SMPD4-211ENST00000449159 PVALEFA0A1B0GWK0 134 aa11.66□□□□□ -0.54
SMPD4-211ENST00000449159 ANKRD63C9JTQ0 380 aa11.66□□□□□ -0.54
SMPD4-211ENST00000449159 HNRNPDLO14979 420 aaKnown RBP11.66□□□□□ -0.54
SMPD4-211ENST00000449159 N4BP3O15049 544 aa11.66□□□□□ -0.54
SMPD4-211ENST00000449159 ZNF623O75123 536 aa11.66□□□□□ -0.54
SMPD4-211ENST00000449159 DGKIO75912 1065 aa11.66□□□□□ -0.54
SMPD4-211ENST00000449159 PRPF6O94906 941 aaKnown RBP11.66□□□□□ -0.54
SMPD4-211ENST00000449159 MYL1P05976 194 aa11.66□□□□□ -0.54
SMPD4-211ENST00000449159 CA3P07451 260 aa11.66□□□□□ -0.54
SMPD4-211ENST00000449159 HARSP12081 509 aaKnown RBP11.66□□□□□ -0.54
SMPD4-211ENST00000449159 PROZP22891 400 aa11.66□□□□□ -0.54
SMPD4-211ENST00000449159 HOXD13P35453 343 aa11.66□□□□□ -0.54
SMPD4-211ENST00000449159 RAB27AP51159 221 aa11.66□□□□□ -0.54
SMPD4-211ENST00000449159 AFF1P51825 1210 aaKnown RBP11.66□□□□□ -0.54
SMPD4-211ENST00000449159 ZNF568Q3ZCX4 644 aa11.66□□□□□ -0.54
SMPD4-211ENST00000449159 KANK3Q6NY19 840 aa11.66□□□□□ -0.54
SMPD4-211ENST00000449159 FAM43BQ6ZT52 329 aaPredicted RBP11.66□□□□□ -0.54
SMPD4-211ENST00000449159 EPM2AIP1Q7L775 607 aaPredicted RBP11.66□□□□□ -0.54
SMPD4-211ENST00000449159 MRPL10Q7Z7H8 261 aaKnown RBP11.66□□□□□ -0.54
SMPD4-211ENST00000449159 ZBTB33Q86T24 672 aa11.66□□□□□ -0.54
SMPD4-211ENST00000449159 MAP4K3Q8IVH8 894 aa11.66□□□□□ -0.54
SMPD4-211ENST00000449159 CEP120Q8N960 986 aa11.66□□□□□ -0.54
SMPD4-211ENST00000449159 HELQQ8TDG4 1101 aa11.66□□□□□ -0.54
SMPD4-211ENST00000449159 PPM1EQ8WY54 764 aa11.66□□□□□ -0.54
SMPD4-211ENST00000449159 BICD1Q96G01 975 aa11.66□□□□□ -0.54
SMPD4-211ENST00000449159 TIGD1Q96MW7 591 aa11.66□□□□□ -0.54
SMPD4-211ENST00000449159 ASB2Q96Q27 587 aa11.66□□□□□ -0.54
SMPD4-211ENST00000449159 YME1L1Q96TA2 773 aa11.66□□□□□ -0.54
SMPD4-211ENST00000449159 RAD9AQ99638 391 aa11.66□□□□□ -0.54
SMPD4-211ENST00000449159 TRIM6Q9C030 488 aaPredicted RBP11.66□□□□□ -0.54
SMPD4-211ENST00000449159 HAPLN2Q9GZV7 340 aa11.66□□□□□ -0.54
SMPD4-211ENST00000449159 CDT1Q9H211 546 aa11.66□□□□□ -0.54
SMPD4-211ENST00000449159 NKX2-4Q9H2Z4 354 aa11.66□□□□□ -0.54
SMPD4-211ENST00000449159 ELAC1Q9H777 363 aaKnown RBP11.66□□□□□ -0.54
SMPD4-211ENST00000449159 SLC28A3Q9HAS3 691 aa11.66□□□□□ -0.54
SMPD4-211ENST00000449159 SLC39A2Q9NP94 309 aa11.66□□□□□ -0.54
SMPD4-211ENST00000449159 EXOC1Q9NV70 894 aa11.66□□□□□ -0.54
SMPD4-211ENST00000449159 HCSTQ9UBK5 93 aa11.66□□□□□ -0.54
SMPD4-211ENST00000449159 TNFSF13BQ9Y275 285 aa11.66□□□□□ -0.54
SMPD4-211ENST00000449159 PCDHA11Q9Y5I1 949 aa11.66□□□□□ -0.54
SMPD4-211ENST00000449159 TCF20Q9UGU0 1960 aaKnown RBP11.66□□□□□ -0.54
SMPD4-211ENST00000449159 ZMYM2Q9UBW7 1377 aa11.66□□□□□ -0.54
SMPD4-211ENST00000449159 PIGRP01833 764 aa11.65□□□□□ -0.54
SMPD4-211ENST00000449159 STAG3L1P0CL83 205 aa11.65□□□□□ -0.54
SMPD4-211ENST00000449159 COL9A1P20849 921 aa11.65□□□□□ -0.54
SMPD4-211ENST00000449159 SCP2P22307 547 aa11.65□□□□□ -0.54
SMPD4-211ENST00000449159 AKAP5P24588 427 aa11.65□□□□□ -0.54
SMPD4-211ENST00000449159 LIG4P49917 911 aa11.65□□□□□ -0.54
SMPD4-211ENST00000449159 STK4Q13043 487 aa11.65□□□□□ -0.54
SMPD4-211ENST00000449159 L1TD1Q5T7N2 865 aaKnown RBP11.65□□□□□ -0.54
SMPD4-211ENST00000449159 MPZL3Q6UWV2 235 aa11.65□□□□□ -0.54
SMPD4-211ENST00000449159 ZPBP2Q6X784 338 aa11.65□□□□□ -0.54
SMPD4-211ENST00000449159 AGMOQ6ZNB7 445 aa11.65□□□□□ -0.54
SMPD4-211ENST00000449159 TMEM192Q8IY95 271 aa11.65□□□□□ -0.54
SMPD4-211ENST00000449159 KIAA0895Q8NCT3 520 aa11.65□□□□□ -0.54
SMPD4-211ENST00000449159 GPT2Q8TD30 523 aa11.65□□□□□ -0.54
SMPD4-211ENST00000449159 SP7Q8TDD2 431 aaPredicted RBP11.65□□□□□ -0.54
SMPD4-211ENST00000449159 SCFD1Q8WVM8 642 aa11.65□□□□□ -0.54
SMPD4-211ENST00000449159 ZNF689Q96CS4 500 aaPredicted RBP11.65□□□□□ -0.54
SMPD4-211ENST00000449159 HVCN1Q96D96 273 aa11.65□□□□□ -0.54
SMPD4-211ENST00000449159 CXCL16Q9H2A7 254 aa11.65□□□□□ -0.54
SMPD4-211ENST00000449159 INSL6Q9Y581 213 aa11.65□□□□□ -0.54
SMPD4-211ENST00000449159 ATG2AQ2TAZ0 1938 aa11.64□□□□□ -0.55
SMPD4-211ENST00000449159 PLXNA4Q9HCM2 1894 aa11.64□□□□□ -0.55
SMPD4-211ENST00000449159 TBKBP1A7MCY6 615 aa11.64□□□□□ -0.55
SMPD4-211ENST00000449159 TOM1L1O75674 476 aa11.64□□□□□ -0.55
SMPD4-211ENST00000449159 EOMESO95936 686 aa11.64□□□□□ -0.55
SMPD4-211ENST00000449159 SKIP12755 728 aa11.64□□□□□ -0.55
SMPD4-211ENST00000449159 ITGA4P13612 1032 aa11.64□□□□□ -0.55
SMPD4-211ENST00000449159 IGFBP4P22692 258 aa11.64□□□□□ -0.55
SMPD4-211ENST00000449159 MRPS5P82675 430 aaKnown RBP11.64□□□□□ -0.55
SMPD4-211ENST00000449159 ADGRE1Q14246 886 aa11.64□□□□□ -0.55
SMPD4-211ENST00000449159 NOLC1Q14978 699 aaKnown RBP eCLIP11.64□□□□□ -0.55
SMPD4-211ENST00000449159 CAMK4Q16566 473 aa11.64□□□□□ -0.55
SMPD4-211ENST00000449159 DCAF4L1Q3SXM0 396 aa11.64□□□□□ -0.55
SMPD4-211ENST00000449159 SEZ6Q53EL9 994 aa11.64□□□□□ -0.55
SMPD4-211ENST00000449159 PPP2R2DQ66LE6 453 aa11.64□□□□□ -0.55
SMPD4-211ENST00000449159 NELFCDQ8IXH7 590 aa11.64□□□□□ -0.55
SMPD4-211ENST00000449159 CCDC34Q96HJ3 373 aa11.64□□□□□ -0.55
SMPD4-211ENST00000449159 ZFP42Q96MM3 310 aa11.64□□□□□ -0.55
SMPD4-211ENST00000449159 CASD1Q96PB1 797 aa11.64□□□□□ -0.55
SMPD4-211ENST00000449159 ACCSQ96QU6 501 aa11.64□□□□□ -0.55
SMPD4-211ENST00000449159 UHRF1Q96T88 793 aaPredicted RBP11.64□□□□□ -0.55
SMPD4-211ENST00000449159 ADPGKQ9BRR6 497 aa11.64□□□□□ -0.55
SMPD4-211ENST00000449159 TCHPQ9BT92 498 aa11.64□□□□□ -0.55
SMPD4-211ENST00000449159 SNTG2Q9NY99 539 aa11.64□□□□□ -0.55
SMPD4-211ENST00000449159 KLK14Q9P0G3 267 aa11.64□□□□□ -0.55
SMPD4-211ENST00000449159 INPP5FQ9Y2H2 1132 aa11.64□□□□□ -0.55
SMPD4-211ENST00000449159 GDAQ9Y2T3 454 aa11.64□□□□□ -0.55
SMPD4-211ENST00000449159 PCDHB13Q9Y5F0 798 aa11.64□□□□□ -0.55
SMPD4-211ENST00000449159 PCDHA5Q9Y5H7 936 aa11.64□□□□□ -0.55
SMPD4-211ENST00000449159 LINC01553A4QN01 128 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms