RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 CHST7Q9NS84 486 aa14.75□□□□□ -0.05
HMGB3-204ENST00000448905 GJB4Q9NTQ9 266 aa14.75□□□□□ -0.05
HMGB3-204ENST00000448905 ZDHHC7Q9NXF8 308 aa14.75□□□□□ -0.05
HMGB3-204ENST00000448905 FNIP2Q9P278 1114 aa14.75□□□□□ -0.05
HMGB3-204ENST00000448905 DUSP12Q9UNI6 340 aa14.75□□□□□ -0.05
HMGB3-204ENST00000448905 MYO10Q9HD67 2058 aa14.75□□□□□ -0.05
HMGB3-204ENST00000448905 A0A1B0GUA9 196 aa14.74□□□□□ -0.05
HMGB3-204ENST00000448905 NEMFO60524 1076 aa14.74□□□□□ -0.05
HMGB3-204ENST00000448905 ARF4P18085 180 aaPredicted RBP14.74□□□□□ -0.05
HMGB3-204ENST00000448905 AKAP5P24588 427 aa14.74□□□□□ -0.05
HMGB3-204ENST00000448905 FOXK2Q01167 660 aa14.74□□□□□ -0.05
HMGB3-204ENST00000448905 MBTD1Q05BQ5 628 aa14.74□□□□□ -0.05
HMGB3-204ENST00000448905 NR5A1Q13285 461 aa14.74□□□□□ -0.05
HMGB3-204ENST00000448905 TMEM132AQ24JP5 1023 aa14.74□□□□□ -0.05
HMGB3-204ENST00000448905 ZBTB8OSQ8IWT0 167 aa14.74□□□□□ -0.05
HMGB3-204ENST00000448905 SLC44A3Q8N4M1 653 aa14.74□□□□□ -0.05
HMGB3-204ENST00000448905 FEZF2Q8TBJ5 459 aa14.74□□□□□ -0.05
HMGB3-204ENST00000448905 ZFP42Q96MM3 310 aa14.74□□□□□ -0.05
HMGB3-204ENST00000448905 NT5C3AQ9H0P0 336 aa14.74□□□□□ -0.05
HMGB3-204ENST00000448905 XPNPEP1Q9NQW7 623 aa14.74□□□□□ -0.05
HMGB3-204ENST00000448905 PRMT7Q9NVM4 692 aaPredicted RBP14.74□□□□□ -0.05
HMGB3-204ENST00000448905 MARCH5Q9NX47 278 aa14.74□□□□□ -0.05
HMGB3-204ENST00000448905 MIOSQ9NXC5 875 aa14.74□□□□□ -0.05
HMGB3-204ENST00000448905 EPS15L1Q9UBC2 864 aa14.74□□□□□ -0.05
HMGB3-204ENST00000448905 ADAM28Q9UKQ2 775 aa14.74□□□□□ -0.05
HMGB3-204ENST00000448905 MYH9P35579 1960 aaKnown RBP14.74□□□□□ -0.05
HMGB3-204ENST00000448905 USP34Q70CQ2 3546 aa14.74□□□□□ -0.05
HMGB3-204ENST00000448905 SPATA31D3P0C874 917 aa14.73□□□□□ -0.05
HMGB3-204ENST00000448905 RARRES1P49788 294 aa14.73□□□□□ -0.05
HMGB3-204ENST00000448905 GRIK3Q13003 919 aa14.73□□□□□ -0.05
HMGB3-204ENST00000448905 CAPSQ13938 189 aa14.73□□□□□ -0.05
HMGB3-204ENST00000448905 SAFBQ15424 915 aaKnown RBP eCLIP14.73□□□□□ -0.05
HMGB3-204ENST00000448905 SPATA31D4Q6ZUB0 917 aa14.73□□□□□ -0.05
HMGB3-204ENST00000448905 MCPH1Q8NEM0 835 aa14.73□□□□□ -0.05
HMGB3-204ENST00000448905 PIGOQ8TEQ8 1089 aa14.73□□□□□ -0.05
HMGB3-204ENST00000448905 RIN2Q8WYP3 895 aaPredicted RBP14.73□□□□□ -0.05
HMGB3-204ENST00000448905 PRIMPOLQ96LW4 560 aa14.73□□□□□ -0.05
HMGB3-204ENST00000448905 NACC1Q96RE7 527 aa14.73□□□□□ -0.05
HMGB3-204ENST00000448905 PRKD2Q9BZL6 878 aa14.73□□□□□ -0.05
HMGB3-204ENST00000448905 ZFP37Q9Y6Q3 630 aaPredicted RBP14.73□□□□□ -0.05
HMGB3-204ENST00000448905 CLUHO75153 1309 aa14.72□□□□□ -0.05
HMGB3-204ENST00000448905 LRRIQ4A6NIV6 560 aa14.72□□□□□ -0.05
HMGB3-204ENST00000448905 TGM5O43548 720 aa14.72□□□□□ -0.05
HMGB3-204ENST00000448905 NPTXRO95502 500 aa14.72□□□□□ -0.05
HMGB3-204ENST00000448905 EFEMP2O95967 443 aa14.72□□□□□ -0.05
HMGB3-204ENST00000448905 MYBP10242 640 aa14.72□□□□□ -0.05
HMGB3-204ENST00000448905 NPR3P17342 541 aa14.72□□□□□ -0.05
HMGB3-204ENST00000448905 ATP2B1P20020 1258 aa14.72□□□□□ -0.05
HMGB3-204ENST00000448905 GLRA2P23416 452 aa14.72□□□□□ -0.05
HMGB3-204ENST00000448905 AMHR2Q16671 573 aa14.72□□□□□ -0.05
HMGB3-204ENST00000448905 EARS2Q5JPH6 523 aaKnown RBP14.72□□□□□ -0.05
HMGB3-204ENST00000448905 FUT10Q6P4F1 479 aa14.72□□□□□ -0.05
HMGB3-204ENST00000448905 PDXDC1Q6P996 788 aa14.72□□□□□ -0.05
HMGB3-204ENST00000448905 ASCL5Q7RTU5 278 aa14.72□□□□□ -0.05
HMGB3-204ENST00000448905 RNF168Q8IYW5 571 aaPredicted RBP14.72□□□□□ -0.05
HMGB3-204ENST00000448905 DTWD2Q8NBA8 298 aa14.72□□□□□ -0.05
HMGB3-204ENST00000448905 ERMNQ8TAM6 284 aa14.72□□□□□ -0.05
HMGB3-204ENST00000448905 ASAP3Q8TDY4 903 aa14.72□□□□□ -0.05
HMGB3-204ENST00000448905 GPR62Q9BZJ7 368 aa14.72□□□□□ -0.05
HMGB3-204ENST00000448905 POLR3FQ9H1D9 316 aaPredicted RBP14.72□□□□□ -0.05
HMGB3-204ENST00000448905 C2orf40Q9H1Z8 148 aa14.72□□□□□ -0.05
HMGB3-204ENST00000448905 SEMA4AQ9H3S1 761 aa14.72□□□□□ -0.05
HMGB3-204ENST00000448905 NXF3Q9H4D5 531 aaKnown RBP14.72□□□□□ -0.05
HMGB3-204ENST00000448905 WDR81Q562E7 1941 aa14.72□□□□□ -0.05
HMGB3-204ENST00000448905 SF3B1O75533 1304 aaKnown RBP eCLIP14.71□□□□□ -0.05
HMGB3-204ENST00000448905 BTBD18B2RXH4 712 aa14.71□□□□□ -0.05
HMGB3-204ENST00000448905 PI15O43692 258 aa14.71□□□□□ -0.05
HMGB3-204ENST00000448905 RFPL2O75678 378 aa14.71□□□□□ -0.05
HMGB3-204ENST00000448905 CTDNEP1O95476 244 aa14.71□□□□□ -0.05
HMGB3-204ENST00000448905 THP07101 528 aa14.71□□□□□ -0.05
HMGB3-204ENST00000448905 CFHP08603 1231 aa14.71□□□□□ -0.05
HMGB3-204ENST00000448905 SRFP11831 508 aa14.71□□□□□ -0.05
HMGB3-204ENST00000448905 LAMP2P13473 410 aa14.71□□□□□ -0.05
HMGB3-204ENST00000448905 ELAVL2Q12926 359 aaKnown RBP14.71□□□□□ -0.05
HMGB3-204ENST00000448905 HSP90AA2PQ14568 343 aaPredicted RBP14.71□□□□□ -0.05
HMGB3-204ENST00000448905 ANGPT1Q15389 498 aa14.71□□□□□ -0.05
HMGB3-204ENST00000448905 LILRA6Q6PI73 481 aa14.71□□□□□ -0.05
HMGB3-204ENST00000448905 MAEAQ7L5Y9 396 aa14.71□□□□□ -0.05
HMGB3-204ENST00000448905 FRMD5Q7Z6J6 570 aa14.71□□□□□ -0.05
HMGB3-204ENST00000448905 DIS3L2Q8IYB7 885 aaKnown RBP14.71□□□□□ -0.05
HMGB3-204ENST00000448905 CCDC105Q8IYK2 499 aa14.71□□□□□ -0.05
HMGB3-204ENST00000448905 NECAB1Q8N987 351 aa14.71□□□□□ -0.05
HMGB3-204ENST00000448905 SNX27Q96L92 541 aa14.71□□□□□ -0.05
HMGB3-204ENST00000448905 MTMR9Q96QG7 549 aa14.71□□□□□ -0.05
HMGB3-204ENST00000448905 ADPGKQ9BRR6 497 aa14.71□□□□□ -0.05
HMGB3-204ENST00000448905 TUFT1Q9NNX1 390 aa14.71□□□□□ -0.05
HMGB3-204ENST00000448905 KLK14Q9P0G3 267 aa14.71□□□□□ -0.05
HMGB3-204ENST00000448905 PLXNA3P51805 1871 aa14.7□□□□□ -0.06
HMGB3-204ENST00000448905 PRR23AA6NEV1 266 aa14.7□□□□□ -0.06
HMGB3-204ENST00000448905 N4BP3O15049 544 aa14.7□□□□□ -0.06
HMGB3-204ENST00000448905 B4GALT5O43286 388 aa14.7□□□□□ -0.06
HMGB3-204ENST00000448905 USO1O60763 962 aaKnown RBP14.7□□□□□ -0.06
HMGB3-204ENST00000448905 ZMYND10O75800 440 aa14.7□□□□□ -0.06
HMGB3-204ENST00000448905 FDPSP14324 419 aaKnown RBP14.7□□□□□ -0.06
HMGB3-204ENST00000448905 TUSC3Q13454 348 aa14.7□□□□□ -0.06
HMGB3-204ENST00000448905 PRPF4BQ13523 1007 aaKnown RBP14.7□□□□□ -0.06
HMGB3-204ENST00000448905 MAPK6Q16659 721 aa14.7□□□□□ -0.06
HMGB3-204ENST00000448905 LIN9Q5TKA1 542 aa14.7□□□□□ -0.06
HMGB3-204ENST00000448905 PPP4R3CPQ6ZMV5 832 aa14.7□□□□□ -0.06
HMGB3-204ENST00000448905 APBB1IPQ7Z5R6 666 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms