RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 TAF2Q6P1X5 1199 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 MTHFD1LQ6UB35 978 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 CCDC81Q6ZN84 652 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 DNAJC9Q8WXX5 260 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 OTUD5Q96G74 571 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 USP28Q96RU2 1077 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 MAGED2Q9UNF1 606 aaPredicted RBP9.41□□□□□ -0.9
NIPBL-202ENST00000448238 INPP5FQ9Y2H2 1132 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 MRPL11Q9Y3B7 192 aaKnown RBP9.41□□□□□ -0.9
NIPBL-202ENST00000448238 TPP2P29144 1249 aaPredicted RBP9.41□□□□□ -0.9
NIPBL-202ENST00000448238 FKBP3Q00688 224 aaKnown RBP9.41□□□□□ -0.9
NIPBL-202ENST00000448238 TNFAIP1Q13829 316 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 UGP2Q16851 508 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 RWDD4Q6NW29 188 aaKnown RBP9.41□□□□□ -0.9
NIPBL-202ENST00000448238 M0R2C6 588 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 SERPING1P05155 500 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 DARSP14868 501 aaKnown RBP9.41□□□□□ -0.9
NIPBL-202ENST00000448238 AKIRIN2Q53H80 203 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 CCDC185Q8N715 623 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 PJA1Q8NG27 643 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 XPO7Q9UIA9 1087 aaKnown RBP9.41□□□□□ -0.9
NIPBL-202ENST00000448238 PCDHGA3Q9Y5H0 932 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 CFAP69A5D8W1 941 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 GTPBP6O43824 516 aaPredicted RBP9.41□□□□□ -0.9
NIPBL-202ENST00000448238 SKAP2O75563 359 aaPredicted RBP9.41□□□□□ -0.9
NIPBL-202ENST00000448238 CALB1P05937 261 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 DPYDQ12882 1025 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 OSCP1Q8WVF1 389 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 MTA3Q9BTC8 594 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 COQ6Q9Y2Z9 468 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 SMAPO00193 183 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 GTF2H3Q13889 308 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 CYP4Z1Q86W10 505 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 AK8Q96MA6 479 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 DDX50Q9BQ39 737 aaKnown RBP9.41□□□□□ -0.9
NIPBL-202ENST00000448238 SAYSD1Q9NPB0 183 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 NDFIP2Q9NV92 336 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 BTBD3Q9Y2F9 522 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 NAIPQ13075 1403 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 CHRNA3P32297 505 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 DSG1Q02413 1049 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 TSNQ15631 228 aaKnown RBP9.41□□□□□ -0.9
NIPBL-202ENST00000448238 NUP93Q8N1F7 819 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 SLC7A3Q8WY07 619 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 RMI1Q9H9A7 625 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 EHD3Q9NZN3 535 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 BFARQ9NZS9 450 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 HERC5Q9UII4 1024 aaKnown RBP9.41□□□□□ -0.9
NIPBL-202ENST00000448238 RABGEF1Q9UJ41 708 aa9.41□□□□□ -0.9
NIPBL-202ENST00000448238 STK25O00506 426 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 CNTN1Q12860 1018 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 COLGALT2Q8IYK4 626 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 CYP39A1Q9NYL5 469 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 SMG5Q9UPR3 1016 aaKnown RBP9.4□□□□□ -0.9
NIPBL-202ENST00000448238 ASXL3Q9C0F0 2248 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 S100A2P29034 98 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 TYK2P29597 1187 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 FAM47EQ6ZV65 393 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 ZNF467Q7Z7K2 595 aaPredicted RBP9.4□□□□□ -0.9
NIPBL-202ENST00000448238 SAMD3Q8N6K7 520 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 THTPAQ9BU02 230 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 SLITRK6Q9H5Y7 841 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 SARS2Q9NP81 518 aaKnown RBP9.4□□□□□ -0.9
NIPBL-202ENST00000448238 GTF2A1LQ9UNN4 478 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 ARHGAP5Q13017 1502 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 NSD2O96028 1365 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 MAGEA13PA6NCF6 341 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 POTEMA6NI47 508 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 TUBA4AP68366 448 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 USF2Q15853 346 aaPredicted RBP9.4□□□□□ -0.9
NIPBL-202ENST00000448238 TIMM50Q3ZCQ8 353 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 TRIM65Q6PJ69 517 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 POTEHQ6S545 545 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 POTEGQ6S5H5 508 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 SLC35F6Q8N357 371 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 CDHR1Q96JP9 859 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 VTA1Q9NP79 307 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 VPS54Q9P1Q0 977 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 NCAPD3P42695 1498 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 E9PBE3 544 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 MEFVO15553 781 aaPredicted RBP9.4□□□□□ -0.9
NIPBL-202ENST00000448238 MFAP3LO75121 409 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 BCL10O95999 233 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 NT5DC4Q86YG4 428 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 THUMPD2Q9BTF0 503 aaKnown RBP9.4□□□□□ -0.9
NIPBL-202ENST00000448238 GCNT4Q9P109 453 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 ING4Q9UNL4 249 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 PLAAQ9Y263 795 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 MSH6P52701 1360 aa9.4□□□□□ -0.9
NIPBL-202ENST00000448238 CBX5P45973 191 aa9.4□□□□□ -0.91
NIPBL-202ENST00000448238 RXRGP48443 463 aa9.4□□□□□ -0.91
NIPBL-202ENST00000448238 IST1P53990 364 aa9.4□□□□□ -0.91
NIPBL-202ENST00000448238 HNRNPH2P55795 449 aaKnown RBP9.4□□□□□ -0.91
NIPBL-202ENST00000448238 RESTQ13127 1097 aa9.4□□□□□ -0.91
NIPBL-202ENST00000448238 GALNT3Q14435 633 aa9.4□□□□□ -0.91
NIPBL-202ENST00000448238 ANKS6Q68DC2 871 aa9.4□□□□□ -0.91
NIPBL-202ENST00000448238 THEM5Q8N1Q8 247 aa9.4□□□□□ -0.91
NIPBL-202ENST00000448238 UBASH3BQ8TF42 649 aa9.4□□□□□ -0.91
NIPBL-202ENST00000448238 CRELD1Q96HD1 420 aa9.4□□□□□ -0.91
NIPBL-202ENST00000448238 CNOT7Q9UIV1 285 aaKnown RBP9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms