RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 ERVFC1P60507 584 aa16.3■□□□□ 0.2
HDAC4-204ENST00000446876 TFF2Q03403 129 aa16.3■□□□□ 0.2
HDAC4-204ENST00000446876 CSPP1Q1MSJ5 1256 aa16.3■□□□□ 0.2
HDAC4-204ENST00000446876 ZNF568Q3ZCX4 644 aa16.3■□□□□ 0.2
HDAC4-204ENST00000446876 ATL3Q6DD88 541 aa16.3■□□□□ 0.2
HDAC4-204ENST00000446876 SV2BQ7L1I2 683 aa16.3■□□□□ 0.2
HDAC4-204ENST00000446876 ADGRD2Q7Z7M1 963 aa16.3■□□□□ 0.2
HDAC4-204ENST00000446876 ZBTB33Q86T24 672 aa16.3■□□□□ 0.2
HDAC4-204ENST00000446876 HACE1Q8IYU2 909 aa16.3■□□□□ 0.2
HDAC4-204ENST00000446876 CEP120Q8N960 986 aa16.3■□□□□ 0.2
HDAC4-204ENST00000446876 STAMQ92783 540 aa16.3■□□□□ 0.2
HDAC4-204ENST00000446876 ZBTB45Q96K62 511 aaPredicted RBP16.3■□□□□ 0.2
HDAC4-204ENST00000446876 CDT1Q9H211 546 aa16.3■□□□□ 0.2
HDAC4-204ENST00000446876 PARVGQ9HBI0 331 aa16.3■□□□□ 0.2
HDAC4-204ENST00000446876 UBN1Q9NPG3 1134 aa16.3■□□□□ 0.2
HDAC4-204ENST00000446876 SPG21Q9NZD8 308 aa16.3■□□□□ 0.2
HDAC4-204ENST00000446876 LARSQ9P2J5 1176 aaKnown RBP16.3■□□□□ 0.2
HDAC4-204ENST00000446876 CFAP45Q9UL16 551 aa16.3■□□□□ 0.2
HDAC4-204ENST00000446876 TNFSF13BQ9Y275 285 aa16.3■□□□□ 0.2
HDAC4-204ENST00000446876 GDAQ9Y2T3 454 aa16.3■□□□□ 0.2
HDAC4-204ENST00000446876 GIT1Q9Y2X7 761 aa16.3■□□□□ 0.2
HDAC4-204ENST00000446876 UNC80Q8N2C7 3258 aa16.3■□□□□ 0.2
HDAC4-204ENST00000446876 SPTBN5Q9NRC6 3674 aaKnown RBP16.29■□□□□ 0.2
HDAC4-204ENST00000446876 INPPL1O15357 1258 aa16.29■□□□□ 0.2
HDAC4-204ENST00000446876 RECQL4O94761 1208 aa16.29■□□□□ 0.2
HDAC4-204ENST00000446876 GALTP07902 379 aa16.29■□□□□ 0.2
HDAC4-204ENST00000446876 HARSP12081 509 aaKnown RBP16.29■□□□□ 0.2
HDAC4-204ENST00000446876 NMT1P30419 496 aaKnown RBP16.29■□□□□ 0.2
HDAC4-204ENST00000446876 PPM1AP35813 382 aa16.29■□□□□ 0.2
HDAC4-204ENST00000446876 ALDH7A1P49419 539 aaKnown RBP16.29■□□□□ 0.2
HDAC4-204ENST00000446876 STRN3Q13033 797 aa16.29■□□□□ 0.2
HDAC4-204ENST00000446876 E2F4Q16254 413 aa16.29■□□□□ 0.2
HDAC4-204ENST00000446876 DCAF4L1Q3SXM0 396 aa16.29■□□□□ 0.2
HDAC4-204ENST00000446876 HAUS6Q7Z4H7 955 aa16.29■□□□□ 0.2
HDAC4-204ENST00000446876 SFR1Q86XK3 245 aa16.29■□□□□ 0.2
HDAC4-204ENST00000446876 GSTCDQ8NEC7 633 aa16.29■□□□□ 0.2
HDAC4-204ENST00000446876 MRPS27Q92552 414 aaKnown RBP16.29■□□□□ 0.2
HDAC4-204ENST00000446876 DDX12PQ92771 950 aa16.29■□□□□ 0.2
HDAC4-204ENST00000446876 DHX58Q96C10 678 aa16.29■□□□□ 0.2
HDAC4-204ENST00000446876 FAM193BQ96PV7 902 aaPredicted RBP16.29■□□□□ 0.2
HDAC4-204ENST00000446876 FIZ1Q96SL8 496 aa16.29■□□□□ 0.2
HDAC4-204ENST00000446876 TLR9Q9NR96 1032 aa16.29■□□□□ 0.2
HDAC4-204ENST00000446876 CACNG4Q9UBN1 327 aa16.29■□□□□ 0.2
HDAC4-204ENST00000446876 RCOR1Q9UKL0 485 aa16.29■□□□□ 0.2
HDAC4-204ENST00000446876 CITO14578 2027 aa16.28■□□□□ 0.2
HDAC4-204ENST00000446876 ABLIM1O14639 778 aa16.28■□□□□ 0.2
HDAC4-204ENST00000446876 TRAK2O60296 914 aa16.28■□□□□ 0.2
HDAC4-204ENST00000446876 OSTNP61366 133 aa16.28■□□□□ 0.2
HDAC4-204ENST00000446876 PLCB3Q01970 1234 aa16.28■□□□□ 0.2
HDAC4-204ENST00000446876 UBE3AQ05086 875 aa16.28■□□□□ 0.2
HDAC4-204ENST00000446876 HYAL1Q12794 435 aa16.28■□□□□ 0.2
HDAC4-204ENST00000446876 PLPP4Q5VZY2 271 aa16.28■□□□□ 0.2
HDAC4-204ENST00000446876 MICAL1Q8TDZ2 1067 aa16.28■□□□□ 0.2
HDAC4-204ENST00000446876 LEO1Q8WVC0 666 aaPredicted RBP16.28■□□□□ 0.2
HDAC4-204ENST00000446876 RSPH1Q8WYR4 309 aa16.28■□□□□ 0.2
HDAC4-204ENST00000446876 DNAJC19Q96DA6 116 aa16.28■□□□□ 0.2
HDAC4-204ENST00000446876 RPS6KC1Q96S38 1066 aa16.28■□□□□ 0.2
HDAC4-204ENST00000446876 IGFLR1Q9H665 355 aa16.28■□□□□ 0.2
HDAC4-204ENST00000446876 PTPRHQ9HD43 1115 aa16.28■□□□□ 0.2
HDAC4-204ENST00000446876 KANSL3Q9P2N6 904 aa16.28■□□□□ 0.2
HDAC4-204ENST00000446876 ANKFY1Q9P2R3 1169 aa16.28■□□□□ 0.2
HDAC4-204ENST00000446876 PRG3Q9Y2Y8 225 aaPredicted RBP16.28■□□□□ 0.2
HDAC4-204ENST00000446876 TCF20Q9UGU0 1960 aaKnown RBP16.27■□□□□ 0.2
HDAC4-204ENST00000446876 F8W810 466 aa16.27■□□□□ 0.2
HDAC4-204ENST00000446876 PTGESO14684 152 aa16.27■□□□□ 0.2
HDAC4-204ENST00000446876 FSCN2O14926 492 aa16.27■□□□□ 0.2
HDAC4-204ENST00000446876 PROZP22891 400 aa16.27■□□□□ 0.2
HDAC4-204ENST00000446876 KRT85P78386 507 aa16.27■□□□□ 0.2
HDAC4-204ENST00000446876 TPRNQ4KMQ1 711 aa16.27■□□□□ 0.2
HDAC4-204ENST00000446876 ZC2HC1CQ53FD0 456 aaPredicted RBP16.27■□□□□ 0.2
HDAC4-204ENST00000446876 RESP18Q5W5W9 173 aa16.27■□□□□ 0.2
HDAC4-204ENST00000446876 MPZL3Q6UWV2 235 aa16.27■□□□□ 0.2
HDAC4-204ENST00000446876 EP400NLQ6ZTU2 488 aa16.27■□□□□ 0.2
HDAC4-204ENST00000446876 RBM23Q86U06 439 aaKnown RBP16.27■□□□□ 0.2
HDAC4-204ENST00000446876 FAM178BQ8IXR5 827 aa16.27■□□□□ 0.2
HDAC4-204ENST00000446876 COLGALT2Q8IYK4 626 aa16.27■□□□□ 0.2
HDAC4-204ENST00000446876 RABGGTAQ92696 567 aa16.27■□□□□ 0.2
HDAC4-204ENST00000446876 HLA-CQ95604 372 aa16.27■□□□□ 0.2
HDAC4-204ENST00000446876 BICD1Q96G01 975 aa16.27■□□□□ 0.2
HDAC4-204ENST00000446876 TMEM169Q96HH4 297 aa16.27■□□□□ 0.2
HDAC4-204ENST00000446876 IGSF21Q96ID5 467 aa16.27■□□□□ 0.2
HDAC4-204ENST00000446876 SPATA32Q96LK8 384 aa16.27■□□□□ 0.2
HDAC4-204ENST00000446876 TCF25Q9BQ70 676 aa16.27■□□□□ 0.2
HDAC4-204ENST00000446876 TCHPQ9BT92 498 aa16.27■□□□□ 0.2
HDAC4-204ENST00000446876 VN1R3Q9BXE9 311 aa16.27■□□□□ 0.2
HDAC4-204ENST00000446876 ENTPD7Q9NQZ7 604 aa16.27■□□□□ 0.2
HDAC4-204ENST00000446876 TBC1D7Q9P0N9 293 aa16.27■□□□□ 0.2
HDAC4-204ENST00000446876 PDCD11Q14690 1871 aaKnown RBP16.27■□□□□ 0.19
HDAC4-204ENST00000446876 NRP1O14786 923 aa16.26■□□□□ 0.19
HDAC4-204ENST00000446876 POLR2DO15514 142 aaKnown RBP16.26■□□□□ 0.19
HDAC4-204ENST00000446876 LINC01565O15544 149 aa16.26■□□□□ 0.19
HDAC4-204ENST00000446876 IDEP14735 1019 aa16.26■□□□□ 0.19
HDAC4-204ENST00000446876 OR1G1P47890 313 aa16.26■□□□□ 0.19
HDAC4-204ENST00000446876 NRIP1P48552 1158 aa16.26■□□□□ 0.19
HDAC4-204ENST00000446876 KRT17Q04695 432 aa16.26■□□□□ 0.19
HDAC4-204ENST00000446876 DSC1Q08554 894 aa16.26■□□□□ 0.19
HDAC4-204ENST00000446876 GRIK3Q13003 919 aa16.26■□□□□ 0.19
HDAC4-204ENST00000446876 SEZ6Q53EL9 994 aa16.26■□□□□ 0.19
HDAC4-204ENST00000446876 GLRA4Q5JXX5 417 aa16.26■□□□□ 0.19
HDAC4-204ENST00000446876 AUTS2Q8WXX7 1259 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms