RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 RAD51CO43502 376 aa18.14■□□□□ 0.49
LAPTM4B-201ENST00000445593 OATP04181 439 aa18.14■□□□□ 0.49
LAPTM4B-201ENST00000445593 GJB1P08034 283 aa18.14■□□□□ 0.49
LAPTM4B-201ENST00000445593 SRGAP2CP0DJJ0 459 aa18.14■□□□□ 0.49
LAPTM4B-201ENST00000445593 HLTFQ14527 1009 aaKnown RBP eCLIP18.14■□□□□ 0.49
LAPTM4B-201ENST00000445593 IFI16Q16666 785 aaKnown RBP18.14■□□□□ 0.49
LAPTM4B-201ENST00000445593 C10orf76Q5T2E6 689 aa18.14■□□□□ 0.49
LAPTM4B-201ENST00000445593 FBXO16Q8IX29 292 aaPredicted RBP18.14■□□□□ 0.49
LAPTM4B-201ENST00000445593 TRAPPC12Q8WVT3 735 aa18.14■□□□□ 0.49
LAPTM4B-201ENST00000445593 SLC7A3Q8WY07 619 aa18.14■□□□□ 0.49
LAPTM4B-201ENST00000445593 SYNGAP1Q96PV0 1343 aa18.14■□□□□ 0.49
LAPTM4B-201ENST00000445593 TARSL2A2RTX5 802 aaKnown RBP18.14■□□□□ 0.49
LAPTM4B-201ENST00000445593 FAM153BP0C7A2 387 aa18.14■□□□□ 0.49
LAPTM4B-201ENST00000445593 GGCXP38435 758 aa18.14■□□□□ 0.49
LAPTM4B-201ENST00000445593 STRN3Q13033 797 aa18.14■□□□□ 0.49
LAPTM4B-201ENST00000445593 MESDQ14696 234 aa18.14■□□□□ 0.49
LAPTM4B-201ENST00000445593 FAM153CQ494X1 144 aa18.14■□□□□ 0.49
LAPTM4B-201ENST00000445593 GJC2Q5T442 439 aaPredicted RBP18.14■□□□□ 0.49
LAPTM4B-201ENST00000445593 TCHPQ9BT92 498 aa18.14■□□□□ 0.49
LAPTM4B-201ENST00000445593 FAM153AQ9UHL3 310 aa18.14■□□□□ 0.49
LAPTM4B-201ENST00000445593 HPCAL4Q9UM19 191 aa18.14■□□□□ 0.49
LAPTM4B-201ENST00000445593 MYH9P35579 1960 aaKnown RBP18.13■□□□□ 0.49
LAPTM4B-201ENST00000445593 ARIH2O95376 493 aa18.13■□□□□ 0.49
LAPTM4B-201ENST00000445593 TCF7P36402 384 aaPredicted RBP18.13■□□□□ 0.49
LAPTM4B-201ENST00000445593 CYP24A1Q07973 514 aa18.13■□□□□ 0.49
LAPTM4B-201ENST00000445593 GPD1LQ8N335 351 aa18.13■□□□□ 0.49
LAPTM4B-201ENST00000445593 USP38Q8NB14 1042 aa18.13■□□□□ 0.49
LAPTM4B-201ENST00000445593 RFFLQ8WZ73 363 aa18.13■□□□□ 0.49
LAPTM4B-201ENST00000445593 FNBP1Q96RU3 617 aa18.13■□□□□ 0.49
LAPTM4B-201ENST00000445593 AMFRQ9UKV5 643 aa18.13■□□□□ 0.49
LAPTM4B-201ENST00000445593 DNAH12Q6ZR08 3092 aa18.13■□□□□ 0.49
LAPTM4B-201ENST00000445593 K7ERI5 159 aa18.13■□□□□ 0.49
LAPTM4B-201ENST00000445593 KRIT1O00522 736 aa18.13■□□□□ 0.49
LAPTM4B-201ENST00000445593 EDN1P05305 212 aa18.13■□□□□ 0.49
LAPTM4B-201ENST00000445593 CCDC172P0C7W6 258 aa18.13■□□□□ 0.49
LAPTM4B-201ENST00000445593 GLRA2P23416 452 aa18.13■□□□□ 0.49
LAPTM4B-201ENST00000445593 IREB2P48200 963 aaKnown RBP18.13■□□□□ 0.49
LAPTM4B-201ENST00000445593 MARCKSL1P49006 195 aa18.13■□□□□ 0.49
LAPTM4B-201ENST00000445593 DNAJC21Q5F1R6 531 aaKnown RBP18.13■□□□□ 0.49
LAPTM4B-201ENST00000445593 LLGL2Q6P1M3 1020 aa18.13■□□□□ 0.49
LAPTM4B-201ENST00000445593 SAMD3Q8N6K7 520 aa18.13■□□□□ 0.49
LAPTM4B-201ENST00000445593 CELF4Q9BZC1 486 aaKnown RBP18.13■□□□□ 0.49
LAPTM4B-201ENST00000445593 RAB20Q9NX57 234 aa18.13■□□□□ 0.49
LAPTM4B-201ENST00000445593 FBXO40Q9UH90 709 aa18.13■□□□□ 0.49
LAPTM4B-201ENST00000445593 NR2E1Q9Y466 385 aa18.13■□□□□ 0.49
LAPTM4B-201ENST00000445593 CYP2C8P10632 490 aa18.12■□□□□ 0.49
LAPTM4B-201ENST00000445593 YBX3P16989 372 aaKnown RBP eCLIP18.12■□□□□ 0.491e-9■■□□□ 14.3
LAPTM4B-201ENST00000445593 OSTNP61366 133 aa18.12■□□□□ 0.49
LAPTM4B-201ENST00000445593 HSDL1Q3SXM5 330 aa18.12■□□□□ 0.49
LAPTM4B-201ENST00000445593 NOL9Q5SY16 702 aaKnown RBP18.12■□□□□ 0.49
LAPTM4B-201ENST00000445593 NT5DC3Q86UY8 548 aa18.12■□□□□ 0.49
LAPTM4B-201ENST00000445593 FBXL13Q8NEE6 735 aa18.12■□□□□ 0.49
LAPTM4B-201ENST00000445593 EPS8L1Q8TE68 723 aa18.12■□□□□ 0.49
LAPTM4B-201ENST00000445593 NT5C1BQ96P26 610 aa18.12■□□□□ 0.49
LAPTM4B-201ENST00000445593 ADAM21Q9UKJ8 722 aa18.12■□□□□ 0.49
LAPTM4B-201ENST00000445593 FGGP02679 453 aa18.12■□□□□ 0.49
LAPTM4B-201ENST00000445593 MCM3P25205 808 aa18.12■□□□□ 0.49
LAPTM4B-201ENST00000445593 TSEN2Q8NCE0 465 aaKnown RBP18.12■□□□□ 0.49
LAPTM4B-201ENST00000445593 CHST13Q8NET6 341 aa18.12■□□□□ 0.49
LAPTM4B-201ENST00000445593 RDM1Q8NG50 284 aa18.12■□□□□ 0.49
LAPTM4B-201ENST00000445593 UBXN6Q9BZV1 441 aa18.12■□□□□ 0.49
LAPTM4B-201ENST00000445593 AMACRQ9UHK6 382 aa18.12■□□□□ 0.49
LAPTM4B-201ENST00000445593 PTPRJQ12913 1337 aa18.12■□□□□ 0.49
LAPTM4B-201ENST00000445593 ATP2A1O14983 1001 aa18.12■□□□□ 0.49
LAPTM4B-201ENST00000445593 CSDE1O75534 798 aaKnown RBP18.12■□□□□ 0.49
LAPTM4B-201ENST00000445593 STAT5BP51692 787 aa18.12■□□□□ 0.49
LAPTM4B-201ENST00000445593 PASD1Q8IV76 773 aa18.12■□□□□ 0.49
LAPTM4B-201ENST00000445593 PCYT2Q99447 389 aa18.12■□□□□ 0.49
LAPTM4B-201ENST00000445593 HAPLN2Q9GZV7 340 aa18.12■□□□□ 0.49
LAPTM4B-201ENST00000445593 SPON1Q9HCB6 807 aa18.12■□□□□ 0.49
LAPTM4B-201ENST00000445593 NENFQ9UMX5 172 aa18.12■□□□□ 0.49
LAPTM4B-201ENST00000445593 PPP2R3BQ9Y5P8 575 aa18.12■□□□□ 0.49
LAPTM4B-201ENST00000445593 CEP350Q5VT06 3117 aa18.11■□□□□ 0.49
LAPTM4B-201ENST00000445593 GSTTP1A0A1W2PQM5 241 aa18.11■□□□□ 0.49
LAPTM4B-201ENST00000445593 NOP56O00567 594 aaKnown RBP18.11■□□□□ 0.49
LAPTM4B-201ENST00000445593 DKC1O60832 514 aaKnown RBP eCLIP18.11■□□□□ 0.49
LAPTM4B-201ENST00000445593 FARP2O94887 1054 aaPredicted RBP18.11■□□□□ 0.49
LAPTM4B-201ENST00000445593 IGBP1P78318 339 aa18.11■□□□□ 0.49
LAPTM4B-201ENST00000445593 KIF22Q14807 665 aa18.11■□□□□ 0.49
LAPTM4B-201ENST00000445593 C12orf56Q8IXR9 622 aa18.11■□□□□ 0.49
LAPTM4B-201ENST00000445593 ZNF516Q92618 1163 aa18.11■□□□□ 0.49
LAPTM4B-201ENST00000445593 CDCA5Q96FF9 252 aa18.11■□□□□ 0.49
LAPTM4B-201ENST00000445593 SENP7Q9BQF6 1050 aa18.11■□□□□ 0.49
LAPTM4B-201ENST00000445593 TIPINQ9BVW5 301 aa18.11■□□□□ 0.49
LAPTM4B-201ENST00000445593 ST6GALNAC4Q9H4F1 302 aa18.11■□□□□ 0.49
LAPTM4B-201ENST00000445593 PARP14Q460N5 1801 aa18.11■□□□□ 0.49
LAPTM4B-201ENST00000445593 CCDC66A2RUB6 948 aa18.11■□□□□ 0.49
LAPTM4B-201ENST00000445593 ZNF233A6NK53 670 aa18.11■□□□□ 0.49
LAPTM4B-201ENST00000445593 RNF40O75150 1001 aa18.11■□□□□ 0.49
LAPTM4B-201ENST00000445593 NF2P35240 595 aa18.11■□□□□ 0.49
LAPTM4B-201ENST00000445593 MYBPC2Q14324 1141 aa18.11■□□□□ 0.49
LAPTM4B-201ENST00000445593 OPTNQ96CV9 577 aa18.11■□□□□ 0.49
LAPTM4B-201ENST00000445593 SYT11Q9BT88 431 aa18.11■□□□□ 0.49
LAPTM4B-201ENST00000445593 TMEM8AQ9HCN3 771 aa18.11■□□□□ 0.49
LAPTM4B-201ENST00000445593 AGO2Q9UKV8 859 aaKnown RBP18.11■□□□□ 0.49
LAPTM4B-201ENST00000445593 TUBBP07437 444 aa18.1■□□□□ 0.49
LAPTM4B-201ENST00000445593 TMEM253P0C7T8 217 aa18.1■□□□□ 0.49
LAPTM4B-201ENST00000445593 CHRNB2P17787 502 aa18.1■□□□□ 0.49
LAPTM4B-201ENST00000445593 MFAP3P55082 362 aa18.1■□□□□ 0.49
LAPTM4B-201ENST00000445593 CASKIN2Q8WXE0 1202 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms