RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 RHOT1Q8IXI2 618 aa19.72■□□□□ 0.75
SHANK3-203ENST00000445220 ISCUQ9H1K1 167 aa19.72■□□□□ 0.75
SHANK3-203ENST00000445220 PPCSQ9HAB8 311 aa19.72■□□□□ 0.75
SHANK3-203ENST00000445220 MTO1Q9Y2Z2 717 aaKnown RBP19.72■□□□□ 0.75
SHANK3-203ENST00000445220 LRRC7Q96NW7 1537 aa19.72■□□□□ 0.75
SHANK3-203ENST00000445220 NQO1P15559 274 aaKnown RBP19.71■□□□□ 0.75
SHANK3-203ENST00000445220 RFX1P22670 979 aa19.71■□□□□ 0.75
SHANK3-203ENST00000445220 PAPOLAP51003 745 aaKnown RBP19.71■□□□□ 0.75
SHANK3-203ENST00000445220 ATL2Q8NHH9 583 aa19.71■□□□□ 0.75
SHANK3-203ENST00000445220 CCT7Q99832 543 aa19.71■□□□□ 0.75
SHANK3-203ENST00000445220 LBHD1Q9BQE6 289 aaPredicted RBP19.71■□□□□ 0.75
SHANK3-203ENST00000445220 DBR1Q9UK59 544 aaKnown RBP19.71■□□□□ 0.75
SHANK3-203ENST00000445220 TMEM120BA0PK00 339 aa19.71■□□□□ 0.75
SHANK3-203ENST00000445220 HNRNPCL2B2RXH8 293 aa19.71■□□□□ 0.75
SHANK3-203ENST00000445220 CALB1P05937 261 aa19.71■□□□□ 0.75
SHANK3-203ENST00000445220 SLC18A3Q16572 532 aa19.71■□□□□ 0.75
SHANK3-203ENST00000445220 LONRF1Q17RB8 773 aa19.71■□□□□ 0.75
SHANK3-203ENST00000445220 TRIM60Q495X7 471 aa19.71■□□□□ 0.75
SHANK3-203ENST00000445220 CEP170P1Q96L14 293 aa19.71■□□□□ 0.75
SHANK3-203ENST00000445220 TRIM51Q9BSJ1 452 aa19.71■□□□□ 0.75
SHANK3-203ENST00000445220 THTPAQ9BU02 230 aa19.71■□□□□ 0.75
SHANK3-203ENST00000445220 ZNF233A6NK53 670 aa19.71■□□□□ 0.75
SHANK3-203ENST00000445220 ADRA2BP18089 450 aa19.71■□□□□ 0.75
SHANK3-203ENST00000445220 TSGA10IPQ3SY00 556 aa19.71■□□□□ 0.75
SHANK3-203ENST00000445220 PPP1R18Q6NYC8 613 aa19.71■□□□□ 0.75
SHANK3-203ENST00000445220 OXER1Q8TDS5 423 aa19.71■□□□□ 0.75
SHANK3-203ENST00000445220 ALG13Q9NP73 1137 aaKnown RBP19.71■□□□□ 0.75
SHANK3-203ENST00000445220 INPP5FQ9Y2H2 1132 aa19.71■□□□□ 0.75
SHANK3-203ENST00000445220 TNS3Q68CZ2 1445 aa19.71■□□□□ 0.75
SHANK3-203ENST00000445220 NRKQ7Z2Y5 1582 aa19.71■□□□□ 0.75
SHANK3-203ENST00000445220 PHF2O75151 1096 aa19.71■□□□□ 0.75
SHANK3-203ENST00000445220 GNAT1P11488 350 aa19.71■□□□□ 0.75
SHANK3-203ENST00000445220 ANXA13P27216 316 aa19.71■□□□□ 0.75
SHANK3-203ENST00000445220 INPP5AQ14642 412 aa19.71■□□□□ 0.75
SHANK3-203ENST00000445220 SURF1Q15526 300 aa19.71■□□□□ 0.75
SHANK3-203ENST00000445220 EXT2Q93063 718 aa19.71■□□□□ 0.75
SHANK3-203ENST00000445220 MASTLQ96GX5 879 aa19.71■□□□□ 0.75
SHANK3-203ENST00000445220 PAPOLBQ9NRJ5 636 aaKnown RBP19.71■□□□□ 0.75
SHANK3-203ENST00000445220 TUBE1Q9UJT0 475 aa19.71■□□□□ 0.75
SHANK3-203ENST00000445220 GOLGA8IPA6NC78 632 aa19.7■□□□□ 0.74
SHANK3-203ENST00000445220 GOLGA8JA6NMD2 632 aa19.7■□□□□ 0.74
SHANK3-203ENST00000445220 ASAP2O43150 1006 aa19.7■□□□□ 0.74
SHANK3-203ENST00000445220 SRGNP10124 158 aa19.7■□□□□ 0.74
SHANK3-203ENST00000445220 ITIH2P19823 946 aa19.7■□□□□ 0.74
SHANK3-203ENST00000445220 SCTRP47872 440 aa19.7■□□□□ 0.74
SHANK3-203ENST00000445220 GLYCTKQ8IVS8 523 aa19.7■□□□□ 0.74
SHANK3-203ENST00000445220 RTKN2Q8IZC4 609 aa19.7■□□□□ 0.74
SHANK3-203ENST00000445220 PNKPQ96T60 521 aa19.7■□□□□ 0.74
SHANK3-203ENST00000445220 ATP6V0A4Q9HBG4 840 aa19.7■□□□□ 0.74
SHANK3-203ENST00000445220 IL1RAPL1Q9NZN1 696 aa19.7■□□□□ 0.74
SHANK3-203ENST00000445220 L1RE1Q9UN81 338 aa19.7■□□□□ 0.74
SHANK3-203ENST00000445220 RAD51CO43502 376 aa19.7■□□□□ 0.74
SHANK3-203ENST00000445220 FMR1Q06787 632 aaKnown RBP eCLIP19.7■□□□□ 0.74
SHANK3-203ENST00000445220 CCDC15Q0P6D6 951 aa19.7■□□□□ 0.74
SHANK3-203ENST00000445220 ITIH4Q14624 930 aa19.7■□□□□ 0.74
SHANK3-203ENST00000445220 PODNQ7Z5L7 613 aa19.7■□□□□ 0.74
SHANK3-203ENST00000445220 SFR1Q86XK3 245 aa19.7■□□□□ 0.74
SHANK3-203ENST00000445220 MINPP1Q9UNW1 487 aa19.7■□□□□ 0.74
SHANK3-203ENST00000445220 B2RBV5 119 aa19.7■□□□□ 0.74
SHANK3-203ENST00000445220 UBXN2AP68543 259 aa19.7■□□□□ 0.74
SHANK3-203ENST00000445220 PRAMEP78395 509 aa19.7■□□□□ 0.74
SHANK3-203ENST00000445220 ZCWPW2Q504Y3 356 aa19.7■□□□□ 0.74
SHANK3-203ENST00000445220 CDR2LQ86X02 465 aaPredicted RBP19.7■□□□□ 0.74
SHANK3-203ENST00000445220 OLFML3Q9NRN5 406 aa19.7■□□□□ 0.74
SHANK3-203ENST00000445220 SPDYE2BA6NHP3 402 aa19.7■□□□□ 0.74
SHANK3-203ENST00000445220 SPDYE6P0CI01 402 aa19.7■□□□□ 0.74
SHANK3-203ENST00000445220 NGRNQ9NPE2 291 aaKnown RBP19.7■□□□□ 0.74
SHANK3-203ENST00000445220 AXIN2Q9Y2T1 843 aa19.7■□□□□ 0.74
SHANK3-203ENST00000445220 OSBPP22059 807 aa19.69■□□□□ 0.74
SHANK3-203ENST00000445220 PMLP29590 882 aa19.69■□□□□ 0.74
SHANK3-203ENST00000445220 SERPINB1P30740 379 aa19.69■□□□□ 0.74
SHANK3-203ENST00000445220 HIF1AQ16665 826 aa19.69■□□□□ 0.74
SHANK3-203ENST00000445220 TMEM51Q9NW97 253 aa19.69■□□□□ 0.74
SHANK3-203ENST00000445220 TRIM10Q9UDY6 481 aa19.69■□□□□ 0.74
SHANK3-203ENST00000445220 QRICH2Q9H0J4 1663 aa19.69■□□□□ 0.74
SHANK3-203ENST00000445220 MYBL1P10243 752 aa19.69■□□□□ 0.74
SHANK3-203ENST00000445220 IGBP1P78318 339 aa19.69■□□□□ 0.74
SHANK3-203ENST00000445220 TSTA3Q13630 321 aaPredicted RBP19.69■□□□□ 0.74
SHANK3-203ENST00000445220 VPS72Q15906 364 aa19.69■□□□□ 0.74
SHANK3-203ENST00000445220 KYNUQ16719 465 aa19.69■□□□□ 0.74
SHANK3-203ENST00000445220 KNOP1Q1ED39 458 aaKnown RBP19.69■□□□□ 0.74
SHANK3-203ENST00000445220 SUGP1Q8IWZ8 645 aaKnown RBP19.69■□□□□ 0.74
SHANK3-203ENST00000445220 REXO1L1PQ8IX06 675 aa19.69■□□□□ 0.74
SHANK3-203ENST00000445220 BLOC1S6Q9UL45 172 aa19.69■□□□□ 0.74
SHANK3-203ENST00000445220 DIP2BQ9P265 1576 aa19.69■□□□□ 0.74
SHANK3-203ENST00000445220 CAMSAP1Q5T5Y3 1602 aa19.69■□□□□ 0.74
SHANK3-203ENST00000445220 COL15A1P39059 1388 aa19.69■□□□□ 0.74
SHANK3-203ENST00000445220 MRPL28Q13084 256 aaKnown RBP19.69■□□□□ 0.74
SHANK3-203ENST00000445220 UBE2SQ16763 222 aa19.69■□□□□ 0.74
SHANK3-203ENST00000445220 FAM47CQ5HY64 1035 aa19.69■□□□□ 0.74
SHANK3-203ENST00000445220 BTNL9Q6UXG8 535 aa19.69■□□□□ 0.74
SHANK3-203ENST00000445220 C11orf70Q9BRQ4 267 aa19.69■□□□□ 0.74
SHANK3-203ENST00000445220 ADNPQ9H2P0 1102 aa19.69■□□□□ 0.74
SHANK3-203ENST00000445220 KIF28PB7ZC32 967 aa19.69■□□□□ 0.74
SHANK3-203ENST00000445220 MAP3K10Q02779 954 aa19.69■□□□□ 0.74
SHANK3-203ENST00000445220 NSL1Q96IY1 281 aa19.69■□□□□ 0.74
SHANK3-203ENST00000445220 SH3GL2Q99962 352 aa19.69■□□□□ 0.74
SHANK3-203ENST00000445220 AURKCQ9UQB9 309 aa19.69■□□□□ 0.74
SHANK3-203ENST00000445220 NEDD4P46934 1319 aa19.68■□□□□ 0.74
SHANK3-203ENST00000445220 MDH1BQ5I0G3 518 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms