RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 GH1P01241 217 aa16.95■□□□□ 0.3
SNX13-204ENST00000444712 TFDP1Q14186 410 aa16.95■□□□□ 0.3
SNX13-204ENST00000444712 BRD3Q15059 726 aa16.95■□□□□ 0.3
SNX13-204ENST00000444712 SPRYD7Q5W111 196 aa16.95■□□□□ 0.3
SNX13-204ENST00000444712 CDCA2Q69YH5 1023 aaPredicted RBP16.95■□□□□ 0.3
SNX13-204ENST00000444712 ZNF572Q7Z3I7 529 aaPredicted RBP16.95■□□□□ 0.3
SNX13-204ENST00000444712 ARHGEF19Q8IW93 802 aa16.95■□□□□ 0.3
SNX13-204ENST00000444712 OSBPL9Q96SU4 736 aa16.95■□□□□ 0.3
SNX13-204ENST00000444712 ERAP1Q9NZ08 941 aa16.95■□□□□ 0.3
SNX13-204ENST00000444712 ASAP2O43150 1006 aa16.94■□□□□ 0.3
SNX13-204ENST00000444712 PALMO75781 387 aa16.94■□□□□ 0.3
SNX13-204ENST00000444712 PNMA6AP0CW24 399 aaPredicted RBP16.94■□□□□ 0.3
SNX13-204ENST00000444712 MCM3P25205 808 aa16.94■□□□□ 0.3
SNX13-204ENST00000444712 MATR3P43243 847 aaKnown RBP eCLIP16.94■□□□□ 0.35e-6■■■■□ 24.5
SNX13-204ENST00000444712 CLCN6P51797 869 aa16.94■□□□□ 0.3
SNX13-204ENST00000444712 CCDC70Q6NSX1 233 aa16.94■□□□□ 0.3
SNX13-204ENST00000444712 SYCE1Q8N0S2 351 aa16.94■□□□□ 0.3
SNX13-204ENST00000444712 PPM1KQ8N3J5 372 aa16.94■□□□□ 0.3
SNX13-204ENST00000444712 LNX1Q8TBB1 728 aaPredicted RBP16.94■□□□□ 0.3
SNX13-204ENST00000444712 EMID1Q96A84 441 aaPredicted RBP16.94■□□□□ 0.3
SNX13-204ENST00000444712 PACSIN1Q9BY11 444 aa16.94■□□□□ 0.3
SNX13-204ENST00000444712 MRPL4Q9BYD3 311 aaKnown RBP16.94■□□□□ 0.3
SNX13-204ENST00000444712 TRPC6Q9Y210 931 aa16.94■□□□□ 0.3
SNX13-204ENST00000444712 CCDC151A5D8V7 595 aa16.94■□□□□ 0.3
SNX13-204ENST00000444712 LRRN2O75325 713 aa16.94■□□□□ 0.3
SNX13-204ENST00000444712 CELF2O95319 508 aaKnown RBP16.94■□□□□ 0.3
SNX13-204ENST00000444712 TMEM253P0C7T8 217 aa16.94■□□□□ 0.3
SNX13-204ENST00000444712 DLATP10515 647 aaKnown RBP16.94■□□□□ 0.3
SNX13-204ENST00000444712 MARK3P27448 753 aa16.94■□□□□ 0.3
SNX13-204ENST00000444712 MAPK4P31152 587 aa16.94■□□□□ 0.3
SNX13-204ENST00000444712 PAFAH1B1P43034 410 aa16.94■□□□□ 0.3
SNX13-204ENST00000444712 FAM110CQ1W6H9 321 aa16.94■□□□□ 0.3
SNX13-204ENST00000444712 CCDC181Q5TID7 509 aa16.94■□□□□ 0.3
SNX13-204ENST00000444712 MAMDC4Q6UXC1 1216 aa16.94■□□□□ 0.3
SNX13-204ENST00000444712 SV2AQ7L0J3 742 aa16.94■□□□□ 0.3
SNX13-204ENST00000444712 PRPF31Q8WWY3 499 aaKnown RBP16.94■□□□□ 0.3
SNX13-204ENST00000444712 CTNNBL1Q8WYA6 563 aaPredicted RBP16.94■□□□□ 0.3
SNX13-204ENST00000444712 AGPAT1Q99943 283 aa16.94■□□□□ 0.3
SNX13-204ENST00000444712 MSTO1Q9BUK6 570 aa16.94■□□□□ 0.3
SNX13-204ENST00000444712 PARD6BQ9BYG5 372 aa16.94■□□□□ 0.3
SNX13-204ENST00000444712 NCANO14594 1321 aa16.93■□□□□ 0.3
SNX13-204ENST00000444712 A0A0B4J269 797 aa16.93■□□□□ 0.3
SNX13-204ENST00000444712 CES2O00748 559 aa16.93■□□□□ 0.3
SNX13-204ENST00000444712 ATP8B1O43520 1251 aa16.93■□□□□ 0.3
SNX13-204ENST00000444712 SRGAP2O75044 1071 aa16.93■□□□□ 0.3
SNX13-204ENST00000444712 ERLIN1O75477 346 aa16.93■□□□□ 0.3
SNX13-204ENST00000444712 NOP2P46087 812 aaKnown RBP16.93■□□□□ 0.3
SNX13-204ENST00000444712 AP3M2P53677 418 aa16.93■□□□□ 0.3
SNX13-204ENST00000444712 GCNT1Q02742 428 aa16.93■□□□□ 0.3
SNX13-204ENST00000444712 ZNF484Q5JVG2 852 aa16.93■□□□□ 0.3
SNX13-204ENST00000444712 GLYCTKQ8IVS8 523 aa16.93■□□□□ 0.3
SNX13-204ENST00000444712 FAM71AQ8IYT1 594 aa16.93■□□□□ 0.3
SNX13-204ENST00000444712 SHC3Q92529 594 aa16.93■□□□□ 0.3
SNX13-204ENST00000444712 CAPZA3Q96KX2 299 aa16.93■□□□□ 0.3
SNX13-204ENST00000444712 C1orf112Q9NSG2 853 aa16.93■□□□□ 0.3
SNX13-204ENST00000444712 SLC5A4Q9NY91 659 aa16.93■□□□□ 0.3
SNX13-204ENST00000444712 COL1A2P08123 1366 aa16.93■□□□□ 0.3
SNX13-204ENST00000444712 ZSCAN20P17040 1043 aaPredicted RBP16.92■□□□□ 0.3
SNX13-204ENST00000444712 ARHGAP1Q07960 439 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 LAMTOR4Q0VGL1 99 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 MAPK6Q16659 721 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 MEI1Q5TIA1 1274 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 TAPT1Q6NXT6 567 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 C15orf39Q6ZRI6 1047 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 DPP9Q86TI2 863 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 PPTC7Q8NI37 304 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 MMS19Q96T76 1030 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 TARS2Q9BW92 718 aaKnown RBP16.92■□□□□ 0.3
SNX13-204ENST00000444712 TLR10Q9BXR5 811 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 SUGCTQ9HAC7 445 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.92■□□□□ 0.3
SNX13-204ENST00000444712 RBAKQ9NYW8 714 aaPredicted RBP16.92■□□□□ 0.3
SNX13-204ENST00000444712 RAB21Q9UL25 225 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 ANKRD62A6NC57 917 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 CLDN3O15551 220 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 TOM1L1O75674 476 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 TNNI1P19237 187 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 GALCP54803 685 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 GRM1Q13255 1194 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 GRB14Q14449 540 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 SURF1Q15526 300 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 WDR44Q5JSH3 913 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 GPR142Q7Z601 462 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 TRIM50Q86XT4 487 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 MSL3Q8N5Y2 521 aaKnown RBP16.92■□□□□ 0.3
SNX13-204ENST00000444712 TAS1R2Q8TE23 839 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 UBE2Q2Q8WVN8 375 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 RFFLQ8WZ73 363 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 TAF4BQ92750 862 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 SEMA4DQ92854 862 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 COPS5Q92905 334 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 CCDC113Q9H0I3 377 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 ARFGAP3Q9NP61 516 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 PDGFCQ9NRA1 345 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 ANKFY1Q9P2R3 1169 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 ADGRA2Q96PE1 1338 aa16.92■□□□□ 0.3
SNX13-204ENST00000444712 TARSL2A2RTX5 802 aaKnown RBP16.91■□□□□ 0.3
SNX13-204ENST00000444712 GRID2IPA4D2P6 1211 aa16.91■□□□□ 0.3
SNX13-204ENST00000444712 ZBTB42B2RXF5 422 aa16.91■□□□□ 0.3
SNX13-204ENST00000444712 MAGEB2O15479 319 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms