RNA–Protein interactions for RNA: ENST00000442892.2

SLC48A1-202, Transcript of solute carrier family 48 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC48A1, Length 1,024 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-202ENST00000442892 CIZ1Q9ULV3 898 aaPredicted RBP13.4□□□□□ -0.26
SLC48A1-202ENST00000442892 NT5C1B-RDH14C9J2C7 533 aa13.39□□□□□ -0.27
SLC48A1-202ENST00000442892 HNRNPDLO14979 420 aaKnown RBP13.39□□□□□ -0.27
SLC48A1-202ENST00000442892 ZNF623O75123 536 aa13.39□□□□□ -0.27
SLC48A1-202ENST00000442892 OFD1O75665 1012 aa13.39□□□□□ -0.27
SLC48A1-202ENST00000442892 GCNT3O95395 438 aa13.39□□□□□ -0.27
SLC48A1-202ENST00000442892 GAP43P17677 238 aa13.39□□□□□ -0.27
SLC48A1-202ENST00000442892 LAG3P18627 525 aa13.39□□□□□ -0.27
SLC48A1-202ENST00000442892 CMA1P23946 247 aa13.39□□□□□ -0.27
SLC48A1-202ENST00000442892 CASP1P29466 404 aa13.39□□□□□ -0.27
SLC48A1-202ENST00000442892 CA8P35219 290 aa13.39□□□□□ -0.27
SLC48A1-202ENST00000442892 SYKP43405 635 aa13.39□□□□□ -0.27
SLC48A1-202ENST00000442892 LIG4P49917 911 aa13.39□□□□□ -0.27
SLC48A1-202ENST00000442892 SCNN1GP51170 649 aa13.39□□□□□ -0.27
SLC48A1-202ENST00000442892 SKIV2LQ15477 1246 aaKnown RBP13.39□□□□□ -0.27
SLC48A1-202ENST00000442892 ZC2HC1CQ53FD0 456 aaPredicted RBP13.39□□□□□ -0.27
SLC48A1-202ENST00000442892 LRRC55Q6ZSA7 311 aa13.39□□□□□ -0.27
SLC48A1-202ENST00000442892 MRPL10Q7Z7H8 261 aaKnown RBP13.39□□□□□ -0.27
SLC48A1-202ENST00000442892 KLHL23Q8NBE8 558 aa13.39□□□□□ -0.27
SLC48A1-202ENST00000442892 MRPS27Q92552 414 aaKnown RBP13.39□□□□□ -0.27
SLC48A1-202ENST00000442892 CLP1Q92989 425 aaKnown RBP13.39□□□□□ -0.27
SLC48A1-202ENST00000442892 DNAJC19Q96DA6 116 aa13.39□□□□□ -0.27
SLC48A1-202ENST00000442892 ZFP42Q96MM3 310 aa13.39□□□□□ -0.27
SLC48A1-202ENST00000442892 ZNF558Q96NG5 402 aa13.39□□□□□ -0.27
SLC48A1-202ENST00000442892 ACO2Q99798 780 aaKnown RBP13.39□□□□□ -0.27
SLC48A1-202ENST00000442892 PYM1Q9BRP8 204 aaKnown RBP13.39□□□□□ -0.27
SLC48A1-202ENST00000442892 CWH43Q9H720 699 aa13.39□□□□□ -0.27
SLC48A1-202ENST00000442892 UBN1Q9NPG3 1134 aa13.39□□□□□ -0.27
SLC48A1-202ENST00000442892 TBC1D13Q9NVG8 400 aa13.39□□□□□ -0.27
SLC48A1-202ENST00000442892 CHMP5Q9NZZ3 219 aa13.39□□□□□ -0.27
SLC48A1-202ENST00000442892 STXBP5LQ9Y2K9 1186 aa13.39□□□□□ -0.27
SLC48A1-202ENST00000442892 ARL5CA6NH57 179 aa13.38□□□□□ -0.27
SLC48A1-202ENST00000442892 GRM6O15303 877 aa13.38□□□□□ -0.27
SLC48A1-202ENST00000442892 AFF1P51825 1210 aaKnown RBP13.38□□□□□ -0.27
SLC48A1-202ENST00000442892 NDUFA8P51970 172 aa13.38□□□□□ -0.27
SLC48A1-202ENST00000442892 ZNF131P52739 623 aa13.38□□□□□ -0.27
SLC48A1-202ENST00000442892 PTPROQ16827 1216 aa13.38□□□□□ -0.27
SLC48A1-202ENST00000442892 MPZL3Q6UWV2 235 aa13.38□□□□□ -0.27
SLC48A1-202ENST00000442892 ZBTB45Q96K62 511 aaPredicted RBP13.38□□□□□ -0.27
SLC48A1-202ENST00000442892 CDT1Q9H211 546 aa13.38□□□□□ -0.27
SLC48A1-202ENST00000442892 GOLPH3LQ9H4A5 285 aa13.38□□□□□ -0.27
SLC48A1-202ENST00000442892 MAGEF1Q9HAY2 307 aa13.38□□□□□ -0.27
SLC48A1-202ENST00000442892 TBX20Q9UMR3 447 aa13.38□□□□□ -0.27
SLC48A1-202ENST00000442892 TNFSF13BQ9Y275 285 aa13.38□□□□□ -0.27
SLC48A1-202ENST00000442892 H3BNC9 293 aa13.37□□□□□ -0.27
SLC48A1-202ENST00000442892 RECQL4O94761 1208 aa13.37□□□□□ -0.27
SLC48A1-202ENST00000442892 RB1P06400 928 aa13.37□□□□□ -0.27
SLC48A1-202ENST00000442892 MYBP10242 640 aa13.37□□□□□ -0.27
SLC48A1-202ENST00000442892 ALDH7A1P49419 539 aaKnown RBP13.37□□□□□ -0.27
SLC48A1-202ENST00000442892 YARSP54577 528 aaKnown RBP13.37□□□□□ -0.27
SLC48A1-202ENST00000442892 BCAR1P56945 870 aa13.37□□□□□ -0.27
SLC48A1-202ENST00000442892 COASYQ13057 564 aa13.37□□□□□ -0.27
SLC48A1-202ENST00000442892 NOLC1Q14978 699 aaKnown RBP eCLIP13.37□□□□□ -0.27
SLC48A1-202ENST00000442892 SEZ6Q53EL9 994 aa13.37□□□□□ -0.27
SLC48A1-202ENST00000442892 KCNT2Q6UVM3 1135 aa13.37□□□□□ -0.27
SLC48A1-202ENST00000442892 CEP120Q8N960 986 aa13.37□□□□□ -0.27
SLC48A1-202ENST00000442892 NOC3LQ8WTT2 800 aaKnown RBP13.37□□□□□ -0.27
SLC48A1-202ENST00000442892 HPS3Q969F9 1004 aa13.37□□□□□ -0.27
SLC48A1-202ENST00000442892 NTPCRQ9BSD7 190 aaKnown RBP13.37□□□□□ -0.27
SLC48A1-202ENST00000442892 CCDC94Q9BW85 323 aaPredicted RBP13.37□□□□□ -0.27
SLC48A1-202ENST00000442892 PLVAPQ9BX97 442 aa13.37□□□□□ -0.27
SLC48A1-202ENST00000442892 TRIM9Q9C026 710 aa13.37□□□□□ -0.27
SLC48A1-202ENST00000442892 KBTBD4Q9NVX7 518 aa13.37□□□□□ -0.27
SLC48A1-202ENST00000442892 SEL1LQ9UBV2 794 aa13.37□□□□□ -0.27
SLC48A1-202ENST00000442892 DNAJB4Q9UDY4 337 aa13.37□□□□□ -0.27
SLC48A1-202ENST00000442892 GIT1Q9Y2X7 761 aa13.37□□□□□ -0.27
SLC48A1-202ENST00000442892 MTCH2Q9Y6C9 303 aa13.37□□□□□ -0.27
SLC48A1-202ENST00000442892 CLDN3O15551 220 aa13.36□□□□□ -0.27
SLC48A1-202ENST00000442892 ACTN4O43707 911 aaKnown RBP13.36□□□□□ -0.27
SLC48A1-202ENST00000442892 LPXNO60711 386 aa13.36□□□□□ -0.27
SLC48A1-202ENST00000442892 FGF18O76093 207 aa13.36□□□□□ -0.27
SLC48A1-202ENST00000442892 ITGB1P05556 798 aa13.36□□□□□ -0.27
SLC48A1-202ENST00000442892 SLFN14P0C7P3 912 aa13.36□□□□□ -0.27
SLC48A1-202ENST00000442892 LINC00271P0C7V0 271 aa13.36□□□□□ -0.27
SLC48A1-202ENST00000442892 OR1G1P47890 313 aa13.36□□□□□ -0.27
SLC48A1-202ENST00000442892 CUL4BQ13620 913 aa13.36□□□□□ -0.27
SLC48A1-202ENST00000442892 CSPP1Q1MSJ5 1256 aa13.36□□□□□ -0.27
SLC48A1-202ENST00000442892 GLRA4Q5JXX5 417 aa13.36□□□□□ -0.27
SLC48A1-202ENST00000442892 EP400NLQ6ZTU2 488 aa13.36□□□□□ -0.27
SLC48A1-202ENST00000442892 ZNF280BQ86YH2 543 aa13.36□□□□□ -0.27
SLC48A1-202ENST00000442892 SYCP3Q8IZU3 236 aa13.36□□□□□ -0.27
SLC48A1-202ENST00000442892 SLC17A8Q8NDX2 589 aa13.36□□□□□ -0.27
SLC48A1-202ENST00000442892 MICAL1Q8TDZ2 1067 aa13.36□□□□□ -0.27
SLC48A1-202ENST00000442892 POF1BQ8WVV4 589 aa13.36□□□□□ -0.27
SLC48A1-202ENST00000442892 NRDE2Q9H7Z3 1164 aa13.36□□□□□ -0.27
SLC48A1-202ENST00000442892 MIOSQ9NXC5 875 aa13.36□□□□□ -0.27
SLC48A1-202ENST00000442892 KANSL3Q9P2N6 904 aa13.36□□□□□ -0.27
SLC48A1-202ENST00000442892 PRG3Q9Y2Y8 225 aaPredicted RBP13.36□□□□□ -0.27
SLC48A1-202ENST00000442892 PDCD11Q14690 1871 aaKnown RBP13.36□□□□□ -0.27
SLC48A1-202ENST00000442892 A0A1W2PQ27 194 aa13.35□□□□□ -0.27
SLC48A1-202ENST00000442892 A0A1W2PQ64 194 aa13.35□□□□□ -0.27
SLC48A1-202ENST00000442892 A0A1W2PQD8 194 aa13.35□□□□□ -0.27
SLC48A1-202ENST00000442892 C5orf67F2Z3F1 127 aa13.35□□□□□ -0.27
SLC48A1-202ENST00000442892 TOM1L1O75674 476 aa13.35□□□□□ -0.27
SLC48A1-202ENST00000442892 DDHD2O94830 711 aa13.35□□□□□ -0.27
SLC48A1-202ENST00000442892 PRPF6O94906 941 aaKnown RBP13.35□□□□□ -0.27
SLC48A1-202ENST00000442892 SLC34A2O95436 690 aa13.35□□□□□ -0.27
SLC48A1-202ENST00000442892 MCF2P10911 925 aa13.35□□□□□ -0.27
SLC48A1-202ENST00000442892 ABCD1P33897 745 aa13.35□□□□□ -0.27
SLC48A1-202ENST00000442892 PPM1AP35813 382 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms