RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 NCAM2O15394 837 aa11.18□□□□□ -0.62
SYN3-204ENST00000441821 HNRNPA1P09651 372 aaKnown RBP eCLIP11.18□□□□□ -0.62
SYN3-204ENST00000441821 ADD1P35611 737 aaKnown RBP11.18□□□□□ -0.62
SYN3-204ENST00000441821 RPS9P46781 194 aaKnown RBP11.18□□□□□ -0.62
SYN3-204ENST00000441821 DHX32Q7L7V1 743 aaKnown RBP11.18□□□□□ -0.62
SYN3-204ENST00000441821 GRASPQ7Z6J2 395 aaPredicted RBP11.18□□□□□ -0.62
SYN3-204ENST00000441821 EXOC8Q8IYI6 725 aa11.18□□□□□ -0.62
SYN3-204ENST00000441821 SLC7A3Q8WY07 619 aa11.18□□□□□ -0.62
SYN3-204ENST00000441821 FGF13Q92913 245 aa11.18□□□□□ -0.62
SYN3-204ENST00000441821 GJA10Q969M2 543 aa11.18□□□□□ -0.62
SYN3-204ENST00000441821 B3GALT6Q96L58 329 aa11.18□□□□□ -0.62
SYN3-204ENST00000441821 GAD1Q99259 594 aa11.18□□□□□ -0.62
SYN3-204ENST00000441821 GPR62Q9BZJ7 368 aa11.18□□□□□ -0.62
SYN3-204ENST00000441821 MINDY3Q9H8M7 445 aa11.18□□□□□ -0.62
SYN3-204ENST00000441821 PARD6AQ9NPB6 346 aa11.18□□□□□ -0.62
SYN3-204ENST00000441821 PRMT8Q9NR22 394 aaPredicted RBP11.18□□□□□ -0.62
SYN3-204ENST00000441821 MIOSQ9NXC5 875 aa11.18□□□□□ -0.62
SYN3-204ENST00000441821 GMEB2Q9UKD1 530 aa11.18□□□□□ -0.62
SYN3-204ENST00000441821 IPPQ9Y573 584 aa11.18□□□□□ -0.62
SYN3-204ENST00000441821 COL4A3Q01955 1670 aa11.17□□□□□ -0.62
SYN3-204ENST00000441821 PRPF3O43395 683 aaKnown RBP11.17□□□□□ -0.62
SYN3-204ENST00000441821 SRGAP2CP0DJJ0 459 aa11.17□□□□□ -0.62
SYN3-204ENST00000441821 CD72P21854 359 aa11.17□□□□□ -0.62
SYN3-204ENST00000441821 AXLP30530 894 aa11.17□□□□□ -0.62
SYN3-204ENST00000441821 MLH1P40692 756 aa11.17□□□□□ -0.62
SYN3-204ENST00000441821 SCNN1GP51170 649 aa11.17□□□□□ -0.62
SYN3-204ENST00000441821 PSMC5P62195 406 aa11.17□□□□□ -0.62
SYN3-204ENST00000441821 IRX6P78412 446 aaPredicted RBP11.17□□□□□ -0.62
SYN3-204ENST00000441821 PCBP1Q15365 356 aaKnown RBP eCLIP11.17□□□□□ -0.62
SYN3-204ENST00000441821 Q4G0T1 1027 aa11.17□□□□□ -0.62
SYN3-204ENST00000441821 RNF20Q5VTR2 975 aa11.17□□□□□ -0.62
SYN3-204ENST00000441821 FUT10Q6P4F1 479 aa11.17□□□□□ -0.62
SYN3-204ENST00000441821 GLYCTKQ8IVS8 523 aa11.17□□□□□ -0.62
SYN3-204ENST00000441821 PRPF31Q8WWY3 499 aaKnown RBP11.17□□□□□ -0.62
SYN3-204ENST00000441821 PSPC1Q8WXF1 523 aaKnown RBP11.17□□□□□ -0.62
SYN3-204ENST00000441821 CHAMP1Q96JM3 812 aa11.17□□□□□ -0.62
SYN3-204ENST00000441821 TCEANC2Q96MN5 208 aa11.17□□□□□ -0.62
SYN3-204ENST00000441821 RNF39Q9H2S5 420 aa11.17□□□□□ -0.62
SYN3-204ENST00000441821 FBXW11Q9UKB1 542 aa11.17□□□□□ -0.62
SYN3-204ENST00000441821 ADAM28Q9UKQ2 775 aa11.17□□□□□ -0.62
SYN3-204ENST00000441821 USP24Q9UPU5 2620 aa11.17□□□□□ -0.62
SYN3-204ENST00000441821 CHD8Q9HCK8 2581 aa11.17□□□□□ -0.62
SYN3-204ENST00000441821 FRYQ5TBA9 3013 aa11.17□□□□□ -0.62
SYN3-204ENST00000441821 CYP3A7-CYP3A51PA0A087WV96 503 aa11.16□□□□□ -0.62
SYN3-204ENST00000441821 SLC30A4O14863 429 aa11.16□□□□□ -0.62
SYN3-204ENST00000441821 ASAP2O43150 1006 aa11.16□□□□□ -0.62
SYN3-204ENST00000441821 RPL17P18621 184 aaKnown RBP11.16□□□□□ -0.62
SYN3-204ENST00000441821 CYP3A7P24462 503 aa11.16□□□□□ -0.62
SYN3-204ENST00000441821 TARSP26639 723 aaKnown RBP11.16□□□□□ -0.62
SYN3-204ENST00000441821 HOXA9P31269 272 aa11.16□□□□□ -0.62
SYN3-204ENST00000441821 NRLP54845 237 aa11.16□□□□□ -0.62
SYN3-204ENST00000441821 NTHL1P78549 312 aa11.16□□□□□ -0.62
SYN3-204ENST00000441821 LAMTOR4Q0VGL1 99 aa11.16□□□□□ -0.62
SYN3-204ENST00000441821 FZD5Q13467 585 aa11.16□□□□□ -0.62
SYN3-204ENST00000441821 PPM1JQ5JR12 505 aa11.16□□□□□ -0.62
SYN3-204ENST00000441821 PLA2G4FQ68DD2 849 aa11.16□□□□□ -0.62
SYN3-204ENST00000441821 NOTUMQ6P988 496 aa11.16□□□□□ -0.62
SYN3-204ENST00000441821 TSSK4Q6SA08 328 aa11.16□□□□□ -0.62
SYN3-204ENST00000441821 ZNF852Q6ZMS4 543 aa11.16□□□□□ -0.62
SYN3-204ENST00000441821 NETO1Q8TDF5 533 aa11.16□□□□□ -0.62
SYN3-204ENST00000441821 CCDC51Q96ER9 411 aa11.16□□□□□ -0.62
SYN3-204ENST00000441821 ZFP42Q96MM3 310 aa11.16□□□□□ -0.62
SYN3-204ENST00000441821 ESYT1Q9BSJ8 1104 aa11.16□□□□□ -0.62
SYN3-204ENST00000441821 PHF20Q9BVI0 1012 aa11.16□□□□□ -0.62
SYN3-204ENST00000441821 EIF2AQ9BY44 585 aaKnown RBP11.16□□□□□ -0.62
SYN3-204ENST00000441821 DHX33Q9H6R0 707 aaKnown RBP11.16□□□□□ -0.62
SYN3-204ENST00000441821 MRPS17Q9Y2R5 130 aaKnown RBP11.16□□□□□ -0.62
SYN3-204ENST00000441821 GIT1Q9Y2X7 761 aa11.16□□□□□ -0.62
SYN3-204ENST00000441821 PPME1Q9Y570 386 aa11.16□□□□□ -0.62
SYN3-204ENST00000441821 SPTBN2O15020 2390 aa11.15□□□□□ -0.62
SYN3-204ENST00000441821 DKC1O60832 514 aaKnown RBP eCLIP11.15□□□□□ -0.62
SYN3-204ENST00000441821 LRP3O75074 770 aa11.15□□□□□ -0.62
SYN3-204ENST00000441821 XYLBO75191 536 aa11.15□□□□□ -0.62
SYN3-204ENST00000441821 TADA2AO75478 443 aa11.15□□□□□ -0.62
SYN3-204ENST00000441821 ERLIN2O94905 339 aa11.15□□□□□ -0.62
SYN3-204ENST00000441821 POU2F2P09086 479 aa11.15□□□□□ -0.62
SYN3-204ENST00000441821 TDGF1P13385 188 aa11.15□□□□□ -0.62
SYN3-204ENST00000441821 RFC5P40937 340 aa11.15□□□□□ -0.62
SYN3-204ENST00000441821 QARSP47897 775 aaKnown RBP11.15□□□□□ -0.62
SYN3-204ENST00000441821 NPEPPSP55786 919 aa11.15□□□□□ -0.62
SYN3-204ENST00000441821 ADCY1Q08828 1119 aa11.15□□□□□ -0.62
SYN3-204ENST00000441821 NCBP1Q09161 790 aaKnown RBP11.15□□□□□ -0.62
SYN3-204ENST00000441821 SPEM2Q0P670 501 aa11.15□□□□□ -0.62
SYN3-204ENST00000441821 PPM1LQ5SGD2 360 aa11.15□□□□□ -0.62
SYN3-204ENST00000441821 LIN9Q5TKA1 542 aa11.15□□□□□ -0.62
SYN3-204ENST00000441821 LAIR1Q6GTX8 287 aa11.15□□□□□ -0.62
SYN3-204ENST00000441821 MAMSTRQ6ZN01 415 aa11.15□□□□□ -0.62
SYN3-204ENST00000441821 TPRG1Q6ZUI0 275 aa11.15□□□□□ -0.62
SYN3-204ENST00000441821 CELF5Q8N6W0 485 aaKnown RBP11.15□□□□□ -0.62
SYN3-204ENST00000441821 RNF149Q8NC42 400 aa11.15□□□□□ -0.62
SYN3-204ENST00000441821 GSTCDQ8NEC7 633 aa11.15□□□□□ -0.62
SYN3-204ENST00000441821 CCDC148Q8NFR7 591 aa11.15□□□□□ -0.62
SYN3-204ENST00000441821 ITFG1Q8TB96 612 aa11.15□□□□□ -0.62
SYN3-204ENST00000441821 ETNPPLQ8TBG4 499 aa11.15□□□□□ -0.62
SYN3-204ENST00000441821 TBCKQ8TEA7 893 aa11.15□□□□□ -0.62
SYN3-204ENST00000441821 TMEM143Q96AN5 459 aa11.15□□□□□ -0.62
SYN3-204ENST00000441821 CEP170P1Q96L14 293 aa11.15□□□□□ -0.62
SYN3-204ENST00000441821 KXD1Q9BQD3 176 aa11.15□□□□□ -0.62
SYN3-204ENST00000441821 CLSTN3Q9BQT9 956 aa11.15□□□□□ -0.62
SYN3-204ENST00000441821 CSRNP2Q9H175 543 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms