RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 CCDC113Q9H0I3 377 aa14.25□□□□□ -0.13
CPSF4-206ENST00000441580 PDCL3Q9H2J4 239 aa14.25□□□□□ -0.13
CPSF4-206ENST00000441580 C1orf112Q9NSG2 853 aa14.25□□□□□ -0.13
CPSF4-206ENST00000441580 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.25□□□□□ -0.13
CPSF4-206ENST00000441580 SLC15A5A6NIM6 579 aa14.24□□□□□ -0.13
CPSF4-206ENST00000441580 ENC1O14682 589 aa14.24□□□□□ -0.13
CPSF4-206ENST00000441580 TMEM253P0C7T8 217 aa14.24□□□□□ -0.13
CPSF4-206ENST00000441580 MARK3P27448 753 aa14.24□□□□□ -0.13
CPSF4-206ENST00000441580 AP3M2P53677 418 aa14.24□□□□□ -0.13
CPSF4-206ENST00000441580 GCNT1Q02742 428 aa14.24□□□□□ -0.13
CPSF4-206ENST00000441580 MAP2K1Q02750 393 aaPredicted RBP14.24□□□□□ -0.13
CPSF4-206ENST00000441580 ITIH3Q06033 890 aa14.24□□□□□ -0.13
CPSF4-206ENST00000441580 GRM1Q13255 1194 aa14.24□□□□□ -0.13
CPSF4-206ENST00000441580 ARHGAP44Q17R89 818 aa14.24□□□□□ -0.13
CPSF4-206ENST00000441580 ZNF572Q7Z3I7 529 aaPredicted RBP14.24□□□□□ -0.13
CPSF4-206ENST00000441580 PLEKHH3Q7Z736 793 aa14.24□□□□□ -0.13
CPSF4-206ENST00000441580 ARHGEF19Q8IW93 802 aa14.24□□□□□ -0.13
CPSF4-206ENST00000441580 SHC3Q92529 594 aa14.24□□□□□ -0.13
CPSF4-206ENST00000441580 CGRRF1Q99675 332 aa14.24□□□□□ -0.13
CPSF4-206ENST00000441580 UBE2TQ9NPD8 197 aaPredicted RBP14.24□□□□□ -0.13
CPSF4-206ENST00000441580 ANKFY1Q9P2R3 1169 aa14.24□□□□□ -0.13
CPSF4-206ENST00000441580 RNF14Q9UBS8 474 aa14.24□□□□□ -0.13
CPSF4-206ENST00000441580 PUF60Q9UHX1 559 aaKnown RBP14.24□□□□□ -0.13
CPSF4-206ENST00000441580 DUSP10Q9Y6W6 482 aa14.24□□□□□ -0.13
CPSF4-206ENST00000441580 ADGRA2Q96PE1 1338 aa14.23□□□□□ -0.13
CPSF4-206ENST00000441580 A0A0B4J269 797 aa14.23□□□□□ -0.13
CPSF4-206ENST00000441580 ZBTB42B2RXF5 422 aa14.23□□□□□ -0.13
CPSF4-206ENST00000441580 DDX3XO00571 662 aaKnown RBP eCLIP14.23□□□□□ -0.13
CPSF4-206ENST00000441580 ASAP2O43150 1006 aa14.23□□□□□ -0.13
CPSF4-206ENST00000441580 LRRN2O75325 713 aa14.23□□□□□ -0.13
CPSF4-206ENST00000441580 TOM1L1O75674 476 aa14.23□□□□□ -0.13
CPSF4-206ENST00000441580 LGALS2P05162 132 aa14.23□□□□□ -0.13
CPSF4-206ENST00000441580 PRKCBP05771 671 aa14.23□□□□□ -0.13
CPSF4-206ENST00000441580 DLATP10515 647 aaKnown RBP14.23□□□□□ -0.13
CPSF4-206ENST00000441580 MCM3P25205 808 aa14.23□□□□□ -0.13
CPSF4-206ENST00000441580 KLRC1P26715 233 aa14.23□□□□□ -0.13
CPSF4-206ENST00000441580 MATR3P43243 847 aaKnown RBP eCLIP14.23□□□□□ -0.13
CPSF4-206ENST00000441580 MKRN3Q13064 507 aaKnown RBP14.23□□□□□ -0.13
CPSF4-206ENST00000441580 SURF1Q15526 300 aa14.23□□□□□ -0.13
CPSF4-206ENST00000441580 MAPK6Q16659 721 aa14.23□□□□□ -0.13
CPSF4-206ENST00000441580 CCDC70Q6NSX1 233 aa14.23□□□□□ -0.13
CPSF4-206ENST00000441580 BRSK2Q8IWQ3 736 aa14.23□□□□□ -0.13
CPSF4-206ENST00000441580 SYCE1Q8N0S2 351 aa14.23□□□□□ -0.13
CPSF4-206ENST00000441580 PPM1KQ8N3J5 372 aa14.23□□□□□ -0.13
CPSF4-206ENST00000441580 MSANTD4Q8NCY6 345 aa14.23□□□□□ -0.13
CPSF4-206ENST00000441580 ZSWIM2Q8NEG5 633 aa14.23□□□□□ -0.13
CPSF4-206ENST00000441580 SLC30A5Q8TAD4 765 aa14.23□□□□□ -0.13
CPSF4-206ENST00000441580 LNX1Q8TBB1 728 aaPredicted RBP14.23□□□□□ -0.13
CPSF4-206ENST00000441580 U2AF1L4Q8WU68 220 aaKnown RBP14.23□□□□□ -0.13
CPSF4-206ENST00000441580 LMBR1Q8WVP7 490 aa14.23□□□□□ -0.13
CPSF4-206ENST00000441580 RFFLQ8WZ73 363 aa14.23□□□□□ -0.13
CPSF4-206ENST00000441580 DHX38Q92620 1227 aaKnown RBP14.23□□□□□ -0.13
CPSF4-206ENST00000441580 RUBCNQ92622 972 aa14.23□□□□□ -0.13
CPSF4-206ENST00000441580 NFKBIZQ9BYH8 718 aa14.23□□□□□ -0.13
CPSF4-206ENST00000441580 RAB20Q9NX57 234 aa14.23□□□□□ -0.13
CPSF4-206ENST00000441580 RBAKQ9NYW8 714 aaPredicted RBP14.23□□□□□ -0.13
CPSF4-206ENST00000441580 MANSC4A6NHS7 340 aaPredicted RBP14.22□□□□□ -0.13
CPSF4-206ENST00000441580 CES2O00748 559 aa14.22□□□□□ -0.13
CPSF4-206ENST00000441580 MAGEB2O15479 319 aa14.22□□□□□ -0.13
CPSF4-206ENST00000441580 BUB1O43683 1085 aa14.22□□□□□ -0.13
CPSF4-206ENST00000441580 PNMA6AP0CW24 399 aaPredicted RBP14.22□□□□□ -0.13
CPSF4-206ENST00000441580 TNFAIP3P21580 790 aa14.22□□□□□ -0.13
CPSF4-206ENST00000441580 PIK3CAP42336 1068 aa14.22□□□□□ -0.13
CPSF4-206ENST00000441580 PDE6CP51160 858 aa14.22□□□□□ -0.13
CPSF4-206ENST00000441580 LAMTOR4Q0VGL1 99 aa14.22□□□□□ -0.13
CPSF4-206ENST00000441580 BRD3Q15059 726 aa14.22□□□□□ -0.13
CPSF4-206ENST00000441580 ZACNQ401N2 412 aa14.22□□□□□ -0.13
CPSF4-206ENST00000441580 TAPT1Q6NXT6 567 aa14.22□□□□□ -0.13
CPSF4-206ENST00000441580 C15orf39Q6ZRI6 1047 aa14.22□□□□□ -0.13
CPSF4-206ENST00000441580 SV2AQ7L0J3 742 aa14.22□□□□□ -0.13
CPSF4-206ENST00000441580 DPP9Q86TI2 863 aa14.22□□□□□ -0.13
CPSF4-206ENST00000441580 FAM71AQ8IYT1 594 aa14.22□□□□□ -0.13
CPSF4-206ENST00000441580 OLIG1Q8TAK6 271 aa14.22□□□□□ -0.13
CPSF4-206ENST00000441580 PRPF31Q8WWY3 499 aaKnown RBP14.22□□□□□ -0.13
CPSF4-206ENST00000441580 CTNNBL1Q8WYA6 563 aaPredicted RBP14.22□□□□□ -0.13
CPSF4-206ENST00000441580 COPS5Q92905 334 aa14.22□□□□□ -0.13
CPSF4-206ENST00000441580 OSBPL9Q96SU4 736 aa14.22□□□□□ -0.13
CPSF4-206ENST00000441580 AGPAT1Q99943 283 aa14.22□□□□□ -0.13
CPSF4-206ENST00000441580 TARS2Q9BW92 718 aaKnown RBP14.22□□□□□ -0.13
CPSF4-206ENST00000441580 PACSIN1Q9BY11 444 aa14.22□□□□□ -0.13
CPSF4-206ENST00000441580 KATNBL1Q9H079 304 aa14.22□□□□□ -0.13
CPSF4-206ENST00000441580 RRAGCQ9HB90 399 aa14.22□□□□□ -0.13
CPSF4-206ENST00000441580 TOPORSQ9NS56 1045 aaPredicted RBP14.22□□□□□ -0.13
CPSF4-206ENST00000441580 HDAC6Q9UBN7 1215 aa14.22□□□□□ -0.13
CPSF4-206ENST00000441580 GRID2IPA4D2P6 1211 aa14.21□□□□□ -0.13
CPSF4-206ENST00000441580 CCDC151A5D8V7 595 aa14.21□□□□□ -0.13
CPSF4-206ENST00000441580 ERLIN1O75477 346 aa14.21□□□□□ -0.13
CPSF4-206ENST00000441580 PALMO75781 387 aa14.21□□□□□ -0.13
CPSF4-206ENST00000441580 C22orf31O95567 290 aa14.21□□□□□ -0.13
CPSF4-206ENST00000441580 HOXD8P13378 290 aaPredicted RBP14.21□□□□□ -0.13
CPSF4-206ENST00000441580 PHKA2P46019 1235 aa14.21□□□□□ -0.13
CPSF4-206ENST00000441580 NLRP11P59045 1033 aaKnown RBP14.21□□□□□ -0.13
CPSF4-206ENST00000441580 POU5F1BQ06416 359 aa14.21□□□□□ -0.13
CPSF4-206ENST00000441580 WDR44Q5JSH3 913 aa14.21□□□□□ -0.13
CPSF4-206ENST00000441580 CCDC181Q5TID7 509 aa14.21□□□□□ -0.13
CPSF4-206ENST00000441580 TMCO3Q6UWJ1 677 aa14.21□□□□□ -0.13
CPSF4-206ENST00000441580 RASAL3Q86YV0 1011 aa14.21□□□□□ -0.13
CPSF4-206ENST00000441580 GLYCTKQ8IVS8 523 aa14.21□□□□□ -0.13
CPSF4-206ENST00000441580 RNF149Q8NC42 400 aa14.21□□□□□ -0.13
CPSF4-206ENST00000441580 HELQQ8TDG4 1101 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 6.1 ms