RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 MAPK13O15264 365 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 NMT1P30419 496 aaKnown RBP12.49□□□□□ -0.41
SMPD4-209ENST00000439886 RFC4P35249 363 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 SOX5P35711 763 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 PTDSS1P48651 473 aaKnown RBP12.49□□□□□ -0.41
SMPD4-209ENST00000439886 CDK8P49336 464 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 STRN3Q13033 797 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 PPP2R5EQ16537 467 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 USH1GQ495M9 461 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 ANO7Q6IWH7 933 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 TTC27Q6P3X3 843 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 ZNF34Q8IZ26 560 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 TTC7AQ9ULT0 858 aaPredicted RBP12.49□□□□□ -0.41
SMPD4-209ENST00000439886 SLIT3O75094 1523 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 MYH1P12882 1939 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 MYH4Q9Y623 1939 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 M0R2N6 131 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 IPO5O00410 1097 aaKnown RBP12.49□□□□□ -0.41
SMPD4-209ENST00000439886 NUDT17P0C025 328 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 PYGMP11217 842 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 CALB2P22676 271 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 CHKAP35790 457 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 TPH2Q8IWU9 490 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 EIF1ADQ8N9N8 165 aaKnown RBP12.49□□□□□ -0.41
SMPD4-209ENST00000439886 SYT15Q9BQS2 421 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 REEP2Q9BRK0 252 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 RNPEPL1Q9HAU8 725 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 NPHS2Q9NP85 383 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 CHD4Q14839 1912 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 NVLO15381 856 aaKnown RBP12.49□□□□□ -0.41
SMPD4-209ENST00000439886 PPP1R15BQ5SWA1 713 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 HS2ST1Q7LGA3 356 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 CARD9Q9H257 536 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 EPB41L4BQ9H329 900 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 UBN1Q9NPG3 1134 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 RABL2BQ9UNT1 228 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 FRMD4BQ9Y2L6 1034 aa12.49□□□□□ -0.41
SMPD4-209ENST00000439886 GOLGA8RI6L899 631 aa12.48□□□□□ -0.41
SMPD4-209ENST00000439886 RARGP13631 454 aa12.48□□□□□ -0.41
SMPD4-209ENST00000439886 ATF2P15336 505 aa12.48□□□□□ -0.41
SMPD4-209ENST00000439886 KCNA3P22001 575 aa12.48□□□□□ -0.41
SMPD4-209ENST00000439886 ALDH1B1P30837 517 aa12.48□□□□□ -0.41
SMPD4-209ENST00000439886 CPA2P48052 419 aa12.48□□□□□ -0.41
SMPD4-209ENST00000439886 RCN1Q15293 331 aa12.48□□□□□ -0.41
SMPD4-209ENST00000439886 DAGLBQ8NCG7 672 aa12.48□□□□□ -0.41
SMPD4-209ENST00000439886 MTMR9Q96QG7 549 aa12.48□□□□□ -0.41
SMPD4-209ENST00000439886 TBC1D10AQ9BXI6 508 aa12.48□□□□□ -0.41
SMPD4-209ENST00000439886 GALNT8Q9NY28 637 aa12.48□□□□□ -0.41
SMPD4-209ENST00000439886 PKD2L1Q9P0L9 805 aa12.48□□□□□ -0.41
SMPD4-209ENST00000439886 CES2O00748 559 aa12.48□□□□□ -0.41
SMPD4-209ENST00000439886 MED24O75448 989 aa12.48□□□□□ -0.41
SMPD4-209ENST00000439886 RASA1P20936 1047 aa12.48□□□□□ -0.41
SMPD4-209ENST00000439886 PEX5P50542 639 aa12.48□□□□□ -0.41
SMPD4-209ENST00000439886 FXR2P51116 673 aaKnown RBP eCLIP12.48□□□□□ -0.41
SMPD4-209ENST00000439886 PLCB3Q01970 1234 aa12.48□□□□□ -0.41
SMPD4-209ENST00000439886 MPP2Q14168 576 aa12.48□□□□□ -0.41
SMPD4-209ENST00000439886 COG2Q14746 738 aa12.48□□□□□ -0.41
SMPD4-209ENST00000439886 C2CD6Q53TS8 623 aa12.48□□□□□ -0.41
SMPD4-209ENST00000439886 CYP4X1Q8N118 509 aa12.48□□□□□ -0.41
SMPD4-209ENST00000439886 PPM1KQ8N3J5 372 aa12.48□□□□□ -0.41
SMPD4-209ENST00000439886 PDCD7Q8N8D1 485 aaKnown RBP12.48□□□□□ -0.41
SMPD4-209ENST00000439886 STK32AQ8WU08 396 aa12.48□□□□□ -0.41
SMPD4-209ENST00000439886 MKL1Q969V6 931 aa12.48□□□□□ -0.41
SMPD4-209ENST00000439886 KLF6Q99612 283 aaPredicted RBP12.48□□□□□ -0.41
SMPD4-209ENST00000439886 DHX36Q9H2U1 1008 aaKnown RBP12.48□□□□□ -0.41
SMPD4-209ENST00000439886 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.48□□□□□ -0.41
SMPD4-209ENST00000439886 ZFP69BQ9UJL9 534 aa12.48□□□□□ -0.41
SMPD4-209ENST00000439886 SYNGAP1Q96PV0 1343 aa12.48□□□□□ -0.41
SMPD4-209ENST00000439886 EXOC1LA0A1B0GW35 172 aa12.47□□□□□ -0.41
SMPD4-209ENST00000439886 FAM196BA6NMK8 535 aa12.47□□□□□ -0.41
SMPD4-209ENST00000439886 FOXN3O00409 490 aaPredicted RBP12.47□□□□□ -0.41
SMPD4-209ENST00000439886 E2F6O75461 281 aa12.47□□□□□ -0.41
SMPD4-209ENST00000439886 UNC5CO95185 931 aa12.47□□□□□ -0.41
SMPD4-209ENST00000439886 COILP38432 576 aaPredicted RBP12.47□□□□□ -0.41
SMPD4-209ENST00000439886 RPS8P62241 208 aaKnown RBP12.47□□□□□ -0.41
SMPD4-209ENST00000439886 MRPS35P82673 323 aaKnown RBP12.47□□□□□ -0.41
SMPD4-209ENST00000439886 LRRC36Q1X8D7 754 aa12.47□□□□□ -0.41
SMPD4-209ENST00000439886 ZCWPW2Q504Y3 356 aa12.47□□□□□ -0.41
SMPD4-209ENST00000439886 CCDC92Q53HC0 331 aaPredicted RBP12.47□□□□□ -0.41
SMPD4-209ENST00000439886 MDH1BQ5I0G3 518 aa12.47□□□□□ -0.41
SMPD4-209ENST00000439886 CFAP157Q5JU67 520 aa12.47□□□□□ -0.41
SMPD4-209ENST00000439886 KAZNQ674X7 775 aa12.47□□□□□ -0.41
SMPD4-209ENST00000439886 ISLR2Q6UXK2 745 aa12.47□□□□□ -0.41
SMPD4-209ENST00000439886 RASGEF1CQ8N431 466 aa12.47□□□□□ -0.41
SMPD4-209ENST00000439886 FAM13CQ8NE31 585 aa12.47□□□□□ -0.41
SMPD4-209ENST00000439886 SLC30A5Q8TAD4 765 aa12.47□□□□□ -0.41
SMPD4-209ENST00000439886 ZNF653Q96CK0 615 aa12.47□□□□□ -0.41
SMPD4-209ENST00000439886 ARHGEF3Q9NR81 526 aa12.47□□□□□ -0.41
SMPD4-209ENST00000439886 GRHL1Q9NZI5 618 aa12.47□□□□□ -0.41
SMPD4-209ENST00000439886 PHTF1Q9UMS5 762 aa12.47□□□□□ -0.41
SMPD4-209ENST00000439886 COG5Q9UP83 839 aa12.47□□□□□ -0.41
SMPD4-209ENST00000439886 LMTK3Q96Q04 1460 aa12.47□□□□□ -0.41
SMPD4-209ENST00000439886 DDX3YO15523 660 aaKnown RBP12.47□□□□□ -0.41
SMPD4-209ENST00000439886 MAP3K13O43283 966 aa12.47□□□□□ -0.41
SMPD4-209ENST00000439886 IL6STP40189 918 aaPredicted RBP12.47□□□□□ -0.41
SMPD4-209ENST00000439886 CRKLP46109 303 aaKnown RBP12.47□□□□□ -0.41
SMPD4-209ENST00000439886 ITGA8P53708 1063 aa12.47□□□□□ -0.41
SMPD4-209ENST00000439886 DPP8Q6V1X1 898 aaPredicted RBP12.47□□□□□ -0.41
SMPD4-209ENST00000439886 CCDC80Q76M96 950 aa12.47□□□□□ -0.41
SMPD4-209ENST00000439886 ERMNQ8TAM6 284 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms