RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 SLC39A4Q6P5W5 647 aa20.1■□□□□ 0.81
HDAC6-208ENST00000438518 PGBD4Q96DM1 585 aa20.1■□□□□ 0.81
HDAC6-208ENST00000438518 MSTO1Q9BUK6 570 aa20.1■□□□□ 0.81
HDAC6-208ENST00000438518 C9IYK1 514 aa20.09■□□□□ 0.81
HDAC6-208ENST00000438518 ANKRD63C9JTQ0 380 aa20.09■□□□□ 0.81
HDAC6-208ENST00000438518 ENPP3O14638 875 aa20.09■□□□□ 0.81
HDAC6-208ENST00000438518 MGEA5O60502 916 aa20.09■□□□□ 0.81
HDAC6-208ENST00000438518 FAM189BP81408 668 aa20.09■□□□□ 0.81
HDAC6-208ENST00000438518 MLLT1Q03111 559 aaPredicted RBP20.09■□□□□ 0.81
HDAC6-208ENST00000438518 UBXN11Q5T124 520 aa20.09■□□□□ 0.81
HDAC6-208ENST00000438518 EEF1DP3Q658K8 133 aa20.09■□□□□ 0.81
HDAC6-208ENST00000438518 NELFBQ8WX92 580 aa20.09■□□□□ 0.81
HDAC6-208ENST00000438518 LINC01599Q8WXQ3 324 aa20.09■□□□□ 0.81
HDAC6-208ENST00000438518 SEMA6BQ9H3T3 888 aa20.09■□□□□ 0.81
HDAC6-208ENST00000438518 UBN1Q9NPG3 1134 aa20.09■□□□□ 0.81
HDAC6-208ENST00000438518 AGO2Q9UKV8 859 aaKnown RBP20.09■□□□□ 0.81
HDAC6-208ENST00000438518 CTNND2Q9UQB3 1225 aa20.09■□□□□ 0.81
HDAC6-208ENST00000438518 PCDHB2Q9Y5E7 798 aa20.09■□□□□ 0.81
HDAC6-208ENST00000438518 RALGAPA2Q2PPJ7 1873 aa20.09■□□□□ 0.81
HDAC6-208ENST00000438518 CAPN15O75808 1086 aa20.08■□□□□ 0.81
HDAC6-208ENST00000438518 NPTXRO95502 500 aa20.08■□□□□ 0.81
HDAC6-208ENST00000438518 FGFR1OPO95684 399 aaKnown RBP20.08■□□□□ 0.81
HDAC6-208ENST00000438518 AMHP03971 560 aa20.08■□□□□ 0.81
HDAC6-208ENST00000438518 STAG3L1P0CL83 205 aa20.08■□□□□ 0.81
HDAC6-208ENST00000438518 ADSSP30520 456 aa20.08■□□□□ 0.81
HDAC6-208ENST00000438518 GRM5P41594 1212 aa20.08■□□□□ 0.81
HDAC6-208ENST00000438518 MAGEA10P43363 369 aaPredicted RBP20.08■□□□□ 0.81
HDAC6-208ENST00000438518 FKBP3Q00688 224 aaKnown RBP20.08■□□□□ 0.81
HDAC6-208ENST00000438518 TMEM240Q5SV17 173 aa20.08■□□□□ 0.81
HDAC6-208ENST00000438518 KLHL10Q6JEL2 608 aa20.08■□□□□ 0.81
HDAC6-208ENST00000438518 MRPL10Q7Z7H8 261 aaKnown RBP20.08■□□□□ 0.81
HDAC6-208ENST00000438518 GPD1LQ8N335 351 aa20.08■□□□□ 0.81
HDAC6-208ENST00000438518 XXYLT1Q8NBI6 393 aa20.08■□□□□ 0.81
HDAC6-208ENST00000438518 HERVK_113Q902F9 699 aa20.08■□□□□ 0.81
HDAC6-208ENST00000438518 ZBTB45Q96K62 511 aaPredicted RBP20.08■□□□□ 0.81
HDAC6-208ENST00000438518 BPIFA3Q9BQP9 254 aa20.08■□□□□ 0.81
HDAC6-208ENST00000438518 CCDC94Q9BW85 323 aaPredicted RBP20.08■□□□□ 0.81
HDAC6-208ENST00000438518 TMEM161AQ9NX61 479 aa20.08■□□□□ 0.81
HDAC6-208ENST00000438518 CETN3O15182 167 aa20.07■□□□□ 0.8
HDAC6-208ENST00000438518 HOXA2O43364 376 aa20.07■□□□□ 0.8
HDAC6-208ENST00000438518 EXTL3O43909 919 aa20.07■□□□□ 0.8
HDAC6-208ENST00000438518 NR3C1P04150 777 aa20.07■□□□□ 0.8
HDAC6-208ENST00000438518 ACRP10323 421 aa20.07■□□□□ 0.8
HDAC6-208ENST00000438518 NR2F2P24468 414 aa20.07■□□□□ 0.8
HDAC6-208ENST00000438518 KCNJ6P48051 423 aa20.07■□□□□ 0.8
HDAC6-208ENST00000438518 ZNF445P59923 1031 aa20.07■□□□□ 0.8
HDAC6-208ENST00000438518 TTI2Q6NXR4 508 aa20.07■□□□□ 0.8
HDAC6-208ENST00000438518 LRSAM1Q6UWE0 723 aa20.07■□□□□ 0.8
HDAC6-208ENST00000438518 ZNF365Q70YC5 407 aa20.07■□□□□ 0.8
HDAC6-208ENST00000438518 C16orf59Q7L2K0 433 aa20.07■□□□□ 0.8
HDAC6-208ENST00000438518 RTN4RL1Q86UN2 441 aaPredicted RBP20.07■□□□□ 0.8
HDAC6-208ENST00000438518 CDR2LQ86X02 465 aaPredicted RBP20.07■□□□□ 0.8
HDAC6-208ENST00000438518 ECHDC2Q86YB7 292 aa20.07■□□□□ 0.8
HDAC6-208ENST00000438518 NPAS4Q8IUM7 802 aa20.07■□□□□ 0.8
HDAC6-208ENST00000438518 ZC3H3Q8IXZ2 948 aaKnown RBP20.07■□□□□ 0.8
HDAC6-208ENST00000438518 FBXL18Q96ME1 805 aa20.07■□□□□ 0.8
HDAC6-208ENST00000438518 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.07■□□□□ 0.8
HDAC6-208ENST00000438518 CBWD1Q9BRT8 395 aa20.07■□□□□ 0.8
HDAC6-208ENST00000438518 MKNK1Q9BUB5 465 aa20.07■□□□□ 0.8
HDAC6-208ENST00000438518 EIF2AQ9BY44 585 aaKnown RBP20.07■□□□□ 0.8
HDAC6-208ENST00000438518 TOPORSQ9NS56 1045 aaPredicted RBP20.07■□□□□ 0.8
HDAC6-208ENST00000438518 DMAC2Q9NW81 257 aa20.07■□□□□ 0.8
HDAC6-208ENST00000438518 HSPBP1Q9NZL4 362 aa20.07■□□□□ 0.8
HDAC6-208ENST00000438518 USP20Q9Y2K6 914 aa20.07■□□□□ 0.8
HDAC6-208ENST00000438518 IPPQ9Y573 584 aa20.07■□□□□ 0.8
HDAC6-208ENST00000438518 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.06■□□□□ 0.8
HDAC6-208ENST00000438518 CITO14578 2027 aa20.06■□□□□ 0.8
HDAC6-208ENST00000438518 MAPK13O15264 365 aa20.06■□□□□ 0.8
HDAC6-208ENST00000438518 TTC3P53804 2025 aa20.06■□□□□ 0.8
HDAC6-208ENST00000438518 WDR5P61964 334 aaKnown RBP20.06■□□□□ 0.8
HDAC6-208ENST00000438518 ANKRD40Q6AI12 368 aa20.06■□□□□ 0.8
HDAC6-208ENST00000438518 ZBTB33Q86T24 672 aa20.06■□□□□ 0.8
HDAC6-208ENST00000438518 ENOX1Q8TC92 643 aaKnown RBP20.06■□□□□ 0.8
HDAC6-208ENST00000438518 PHOSPHO2Q8TCD6 241 aa20.06■□□□□ 0.8
HDAC6-208ENST00000438518 CEP63Q96MT8 703 aa20.06■□□□□ 0.8
HDAC6-208ENST00000438518 TSPAN18Q96SJ8 248 aa20.06■□□□□ 0.8
HDAC6-208ENST00000438518 SLC9A7Q96T83 725 aa20.06■□□□□ 0.8
HDAC6-208ENST00000438518 GDF15Q99988 308 aa20.06■□□□□ 0.8
HDAC6-208ENST00000438518 HAPLN2Q9GZV7 340 aa20.06■□□□□ 0.8
HDAC6-208ENST00000438518 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.06■□□□□ 0.8
HDAC6-208ENST00000438518 TISP43B9A030 160 aa20.05■□□□□ 0.8
HDAC6-208ENST00000438518 CLIC2O15247 247 aa20.05■□□□□ 0.8
HDAC6-208ENST00000438518 FAM189A1O60320 539 aa20.05■□□□□ 0.8
HDAC6-208ENST00000438518 EXOC3O60645 756 aa20.05■□□□□ 0.8
HDAC6-208ENST00000438518 CLTAP09496 248 aa20.05■□□□□ 0.8
HDAC6-208ENST00000438518 ITGA4P13612 1032 aa20.05■□□□□ 0.8
HDAC6-208ENST00000438518 BMP8BP34820 402 aa20.05■□□□□ 0.8
HDAC6-208ENST00000438518 YARSP54577 528 aaKnown RBP20.05■□□□□ 0.8
HDAC6-208ENST00000438518 ENPEPQ07075 957 aa20.05■□□□□ 0.8
HDAC6-208ENST00000438518 ADAM9Q13443 819 aa20.05■□□□□ 0.8
HDAC6-208ENST00000438518 TCTN1Q2MV58 587 aa20.05■□□□□ 0.8
HDAC6-208ENST00000438518 ANO6Q4KMQ2 910 aa20.05■□□□□ 0.8
HDAC6-208ENST00000438518 ZNF598Q86UK7 904 aaKnown RBP20.05■□□□□ 0.8
HDAC6-208ENST00000438518 CD302Q8IX05 232 aa20.05■□□□□ 0.8
HDAC6-208ENST00000438518 SMG8Q8ND04 991 aaKnown RBP20.05■□□□□ 0.8
HDAC6-208ENST00000438518 NOC3LQ8WTT2 800 aaKnown RBP20.05■□□□□ 0.8
HDAC6-208ENST00000438518 ACAP3Q96P50 834 aa20.05■□□□□ 0.8
HDAC6-208ENST00000438518 DNAJC25Q9H1X3 360 aa20.05■□□□□ 0.8
HDAC6-208ENST00000438518 IKZF4Q9H2S9 585 aa20.05■□□□□ 0.8
HDAC6-208ENST00000438518 PLEKHA5Q9HAU0 1116 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms