RNA–Protein interactions for RNA: ENST00000436786.1

LINC01239-202, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 2 BASIC

Gene LINC01239, Length 2,347 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-202ENST00000436786 NONOQ15233 471 aaKnown RBP eCLIP4.95□□□□□ -1.62
LINC01239-202ENST00000436786 PTPN14Q15678 1187 aa4.95□□□□□ -1.62
LINC01239-202ENST00000436786 UBXN11Q5T124 520 aa4.95□□□□□ -1.62
LINC01239-202ENST00000436786 KIAA1841Q6NSI8 718 aa4.95□□□□□ -1.62
LINC01239-202ENST00000436786 MOXD1Q6UVY6 613 aa4.95□□□□□ -1.62
LINC01239-202ENST00000436786 TMC5Q6UXY8 1006 aa4.95□□□□□ -1.62
LINC01239-202ENST00000436786 AGMOQ6ZNB7 445 aa4.95□□□□□ -1.62
LINC01239-202ENST00000436786 MRPL10Q7Z7H8 261 aaKnown RBP4.95□□□□□ -1.62
LINC01239-202ENST00000436786 ZDHHC14Q8IZN3 488 aa4.95□□□□□ -1.62
LINC01239-202ENST00000436786 TMEM105Q8N8V8 129 aa4.95□□□□□ -1.62
LINC01239-202ENST00000436786 PRPF31Q8WWY3 499 aaKnown RBP4.95□□□□□ -1.62
LINC01239-202ENST00000436786 PGBD4Q96DM1 585 aa4.95□□□□□ -1.62
LINC01239-202ENST00000436786 ZNF274Q96GC6 653 aaPredicted RBP4.95□□□□□ -1.62
LINC01239-202ENST00000436786 SLKQ9H2G2 1235 aaPredicted RBP4.95□□□□□ -1.62
LINC01239-202ENST00000436786 MINDY3Q9H8M7 445 aa4.95□□□□□ -1.62
LINC01239-202ENST00000436786 AGPAT5Q9NUQ2 364 aa4.95□□□□□ -1.62
LINC01239-202ENST00000436786 WRAP73Q9P2S5 460 aaPredicted RBP4.95□□□□□ -1.62
LINC01239-202ENST00000436786 DBR1Q9UK59 544 aaKnown RBP4.95□□□□□ -1.62
LINC01239-202ENST00000436786 COL4A3BPQ9Y5P4 624 aa4.95□□□□□ -1.62
LINC01239-202ENST00000436786 CYP46A1Q9Y6A2 500 aa4.95□□□□□ -1.62
LINC01239-202ENST00000436786 KMT2EQ8IZD2 1858 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 ZNF318Q5VUA4 2279 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 POMCP01189 267 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 ALDH2P05091 517 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 CNPP09543 421 aaKnown RBP4.94□□□□□ -1.62
LINC01239-202ENST00000436786 KLRC2P26717 231 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 HOXA11P31270 313 aaPredicted RBP4.94□□□□□ -1.62
LINC01239-202ENST00000436786 LAMTOR4Q0VGL1 99 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 PPP2R5CQ13362 524 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 LETM2Q2VYF4 491 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 GALNT17Q6IS24 598 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 TAS1R1Q7RTX1 841 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 KRT25Q7Z3Z0 450 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 CABP7Q86V35 215 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 TDRD5Q8NAT2 981 aaKnown RBP4.94□□□□□ -1.62
LINC01239-202ENST00000436786 URGCPQ8TCY9 931 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 SLC7A3Q8WY07 619 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 RSPH1Q8WYR4 309 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 CEP170P1Q96L14 293 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 FAM20AQ96MK3 541 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 KLHL5Q96PQ7 755 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 JPH2Q9BR39 696 aaPredicted RBP4.94□□□□□ -1.62
LINC01239-202ENST00000436786 IRF2BPLQ9H1B7 796 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 GJB4Q9NTQ9 266 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 FAN1Q9Y2M0 1017 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 CCDC194A0A1B0GVG4 234 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 CARNS1A5YM72 827 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 NRP1O14786 923 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 ZBTB39O15060 712 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 LILRB3O75022 631 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 P4HBP07237 508 aaKnown RBP4.94□□□□□ -1.62
LINC01239-202ENST00000436786 RFC5P40937 340 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 CLCN4P51793 760 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 CTTNQ14247 550 aaKnown RBP4.94□□□□□ -1.62
LINC01239-202ENST00000436786 SRGAP1Q7Z6B7 1085 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 GPR149Q86SP6 731 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 PPFIBP1Q86W92 1011 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 FAM177A1Q8N128 213 aaPredicted RBP4.94□□□□□ -1.62
LINC01239-202ENST00000436786 SMG8Q8ND04 991 aaKnown RBP4.94□□□□□ -1.62
LINC01239-202ENST00000436786 HAS1Q92839 578 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 FAM193BQ96PV7 902 aaPredicted RBP4.94□□□□□ -1.62
LINC01239-202ENST00000436786 SPSB2Q99619 263 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 TMEM175Q9BSA9 504 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 PHF20Q9BVI0 1012 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 EMILIN2Q9BXX0 1053 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 TM6SF1Q9BZW5 370 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 DHX33Q9H6R0 707 aaKnown RBP4.94□□□□□ -1.62
LINC01239-202ENST00000436786 SFXN1Q9H9B4 322 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 RSAD1Q9HA92 442 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 KCNMB3Q9NPA1 279 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 PDRG1Q9NUG6 133 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 RGL1Q9NZL6 768 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 USTQ9Y2C2 406 aa4.94□□□□□ -1.62
LINC01239-202ENST00000436786 MYH9P35579 1960 aaKnown RBP4.94□□□□□ -1.62
LINC01239-202ENST00000436786 PIEZO1Q92508 2521 aa4.93□□□□□ -1.62
LINC01239-202ENST00000436786 CNTNAP2Q9UHC6 1331 aa4.93□□□□□ -1.62
LINC01239-202ENST00000436786 WDFY4Q6ZS81 3184 aa4.93□□□□□ -1.62
LINC01239-202ENST00000436786 C2CD2LO14523 706 aa4.93□□□□□ -1.62
LINC01239-202ENST00000436786 MARCH6O60337 910 aa4.93□□□□□ -1.62
LINC01239-202ENST00000436786 CCNT1O60563 726 aaKnown RBP4.93□□□□□ -1.62
LINC01239-202ENST00000436786 DKC1O60832 514 aaKnown RBP eCLIP4.93□□□□□ -1.62
LINC01239-202ENST00000436786 MYBP10242 640 aa4.93□□□□□ -1.62
LINC01239-202ENST00000436786 ITGA4P13612 1032 aa4.93□□□□□ -1.62
LINC01239-202ENST00000436786 NCLP19338 710 aaKnown RBP4.93□□□□□ -1.62
LINC01239-202ENST00000436786 YWHABP31946 246 aaKnown RBP4.93□□□□□ -1.62
LINC01239-202ENST00000436786 EMC2Q15006 297 aa4.93□□□□□ -1.62
LINC01239-202ENST00000436786 EPHA7Q15375 998 aa4.93□□□□□ -1.62
LINC01239-202ENST00000436786 XKR9Q5GH70 373 aa4.93□□□□□ -1.62
LINC01239-202ENST00000436786 EARS2Q5JPH6 523 aaKnown RBP4.93□□□□□ -1.62
LINC01239-202ENST00000436786 NCAPH2Q6IBW4 605 aa4.93□□□□□ -1.62
LINC01239-202ENST00000436786 PPP4R3AQ6IN85 833 aa4.93□□□□□ -1.62
LINC01239-202ENST00000436786 CPLX2Q6PUV4 134 aaKnown RBP4.93□□□□□ -1.62
LINC01239-202ENST00000436786 PIK3AP1Q6ZUJ8 805 aa4.93□□□□□ -1.62
LINC01239-202ENST00000436786 NEK8Q86SG6 692 aa4.93□□□□□ -1.62
LINC01239-202ENST00000436786 FERMT3Q86UX7 667 aa4.93□□□□□ -1.62
LINC01239-202ENST00000436786 C4orf19Q8IY42 314 aa4.93□□□□□ -1.62
LINC01239-202ENST00000436786 COLGALT2Q8IYK4 626 aa4.93□□□□□ -1.62
LINC01239-202ENST00000436786 RNF149Q8NC42 400 aa4.93□□□□□ -1.62
LINC01239-202ENST00000436786 PSPC1Q8WXF1 523 aaKnown RBP4.93□□□□□ -1.62
LINC01239-202ENST00000436786 DYDC2Q96IM9 177 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms