RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 TAS1R3Q7RTX0 852 aa12.32□□□□□ -0.44
LINC00539-203ENST00000434601 TMC6Q7Z403 805 aa12.32□□□□□ -0.44
LINC00539-203ENST00000434601 RHPN2Q8IUC4 686 aa12.32□□□□□ -0.44
LINC00539-203ENST00000434601 SLC9A9Q8IVB4 645 aa12.32□□□□□ -0.44
LINC00539-203ENST00000434601 VSTM4Q8IW00 320 aa12.32□□□□□ -0.44
LINC00539-203ENST00000434601 ZBTB8OSQ8IWT0 167 aa12.32□□□□□ -0.44
LINC00539-203ENST00000434601 PHOSPHO2Q8TCD6 241 aa12.32□□□□□ -0.44
LINC00539-203ENST00000434601 TMEM174Q8WUU8 243 aa12.32□□□□□ -0.44
LINC00539-203ENST00000434601 LMBR1Q8WVP7 490 aa12.32□□□□□ -0.44
LINC00539-203ENST00000434601 ZBTB10Q96DT7 871 aa12.32□□□□□ -0.44
LINC00539-203ENST00000434601 SLC9A7Q96T83 725 aa12.32□□□□□ -0.44
LINC00539-203ENST00000434601 MKNK1Q9BUB5 465 aa12.32□□□□□ -0.44
LINC00539-203ENST00000434601 C2orf40Q9H1Z8 148 aa12.32□□□□□ -0.44
LINC00539-203ENST00000434601 TMEM134Q9H6X4 195 aa12.32□□□□□ -0.44
LINC00539-203ENST00000434601 NOD1Q9Y239 953 aa12.32□□□□□ -0.44
LINC00539-203ENST00000434601 YBX2Q9Y2T7 364 aaKnown RBP12.32□□□□□ -0.44
LINC00539-203ENST00000434601 TET1Q8NFU7 2136 aa12.32□□□□□ -0.44
LINC00539-203ENST00000434601 ASAP2O43150 1006 aa12.31□□□□□ -0.44
LINC00539-203ENST00000434601 TEX33O43247 280 aa12.31□□□□□ -0.44
LINC00539-203ENST00000434601 AKAP3O75969 853 aa12.31□□□□□ -0.44
LINC00539-203ENST00000434601 CYP2C9P11712 490 aa12.31□□□□□ -0.44
LINC00539-203ENST00000434601 CYP2J2P51589 502 aa12.31□□□□□ -0.44
LINC00539-203ENST00000434601 EFNA5P52803 228 aa12.31□□□□□ -0.44
LINC00539-203ENST00000434601 RABGGTBP53611 331 aa12.31□□□□□ -0.44
LINC00539-203ENST00000434601 CHMP4BP1P59074 171 aa12.31□□□□□ -0.44
LINC00539-203ENST00000434601 CCDC85BQ15834 202 aaPredicted RBP12.31□□□□□ -0.44
LINC00539-203ENST00000434601 AAK1Q2M2I8 961 aa12.31□□□□□ -0.44
LINC00539-203ENST00000434601 VWA3BQ502W6 1294 aa12.31□□□□□ -0.44
LINC00539-203ENST00000434601 MARCH8Q5T0T0 291 aa12.31□□□□□ -0.44
LINC00539-203ENST00000434601 ARMCX5Q6P1M9 558 aa12.31□□□□□ -0.44
LINC00539-203ENST00000434601 FRMD5Q7Z6J6 570 aa12.31□□□□□ -0.44
LINC00539-203ENST00000434601 DEFB128Q7Z7B8 93 aa12.31□□□□□ -0.44
LINC00539-203ENST00000434601 CCDC155Q8N6L0 562 aa12.31□□□□□ -0.44
LINC00539-203ENST00000434601 RNF149Q8NC42 400 aa12.31□□□□□ -0.44
LINC00539-203ENST00000434601 TRIM44Q96DX7 344 aaPredicted RBP12.31□□□□□ -0.44
LINC00539-203ENST00000434601 BICD1Q96G01 975 aa12.31□□□□□ -0.44
LINC00539-203ENST00000434601 NLRP4Q96MN2 994 aa12.31□□□□□ -0.44
LINC00539-203ENST00000434601 MAP7D2Q96T17 732 aa12.31□□□□□ -0.44
LINC00539-203ENST00000434601 METTL14Q9HCE5 456 aaKnown RBP12.31□□□□□ -0.44
LINC00539-203ENST00000434601 SETD4Q9NVD3 440 aa12.31□□□□□ -0.44
LINC00539-203ENST00000434601 DMAC2Q9NW81 257 aa12.31□□□□□ -0.44
LINC00539-203ENST00000434601 IMPACTQ9P2X3 320 aa12.31□□□□□ -0.44
LINC00539-203ENST00000434601 AKT3Q9Y243 479 aa12.31□□□□□ -0.44
LINC00539-203ENST00000434601 ITIH6Q6UXX5 1313 aa12.31□□□□□ -0.44
LINC00539-203ENST00000434601 TCF20Q9UGU0 1960 aaKnown RBP12.3□□□□□ -0.44
LINC00539-203ENST00000434601 KAT6AQ92794 2004 aa12.3□□□□□ -0.44
LINC00539-203ENST00000434601 EVPLQ92817 2033 aa12.3□□□□□ -0.44
LINC00539-203ENST00000434601 MBLAC1A4D2B0 266 aaPredicted RBP12.3□□□□□ -0.44
LINC00539-203ENST00000434601 TISP43B9A030 160 aa12.3□□□□□ -0.44
LINC00539-203ENST00000434601 K7ERI5 159 aa12.3□□□□□ -0.44
LINC00539-203ENST00000434601 PES1O00541 588 aaKnown RBP12.3□□□□□ -0.44
LINC00539-203ENST00000434601 HNRNPDLO14979 420 aaKnown RBP12.3□□□□□ -0.44
LINC00539-203ENST00000434601 PARNO95453 639 aaKnown RBP12.3□□□□□ -0.44
LINC00539-203ENST00000434601 PIGRP01833 764 aa12.3□□□□□ -0.44
LINC00539-203ENST00000434601 SRGAP2CP0DJJ0 459 aa12.3□□□□□ -0.44
LINC00539-203ENST00000434601 PSMC2P35998 433 aaKnown RBP12.3□□□□□ -0.44
LINC00539-203ENST00000434601 PBX1P40424 430 aa12.3□□□□□ -0.44
LINC00539-203ENST00000434601 PHKA2P46019 1235 aa12.3□□□□□ -0.44
LINC00539-203ENST00000434601 CASP4P49662 377 aa12.3□□□□□ -0.44
LINC00539-203ENST00000434601 LIG4P49917 911 aa12.3□□□□□ -0.44
LINC00539-203ENST00000434601 UBXN1Q04323 297 aa12.3□□□□□ -0.44
LINC00539-203ENST00000434601 MIIPQ5JXC2 388 aa12.3□□□□□ -0.44
LINC00539-203ENST00000434601 FKBP15Q5T1M5 1219 aa12.3□□□□□ -0.44
LINC00539-203ENST00000434601 SLC39A4Q6P5W5 647 aa12.3□□□□□ -0.44
LINC00539-203ENST00000434601 TRIM59Q8IWR1 403 aa12.3□□□□□ -0.44
LINC00539-203ENST00000434601 FAM186BQ8IYM0 893 aa12.3□□□□□ -0.44
LINC00539-203ENST00000434601 CBWD1Q9BRT8 395 aa12.3□□□□□ -0.44
LINC00539-203ENST00000434601 NFKBIZQ9BYH8 718 aa12.3□□□□□ -0.44
LINC00539-203ENST00000434601 CCDC113Q9H0I3 377 aa12.3□□□□□ -0.44
LINC00539-203ENST00000434601 HSPBP1Q9NZL4 362 aa12.3□□□□□ -0.44
LINC00539-203ENST00000434601 ARMCX3Q9UH62 379 aaPredicted RBP12.3□□□□□ -0.44
LINC00539-203ENST00000434601 FRMD4BQ9Y2L6 1034 aa12.3□□□□□ -0.44
LINC00539-203ENST00000434601 SMIM35A0A1B0GVV1 85 aa12.29□□□□□ -0.44
LINC00539-203ENST00000434601 A0A1W2PQC6 194 aa12.29□□□□□ -0.44
LINC00539-203ENST00000434601 C17orf102A2RUQ5 167 aa12.29□□□□□ -0.44
LINC00539-203ENST00000434601 ANKRD63C9JTQ0 380 aa12.29□□□□□ -0.44
LINC00539-203ENST00000434601 EXOC3O60645 756 aa12.29□□□□□ -0.44
LINC00539-203ENST00000434601 BAIAP3O94812 1187 aa12.29□□□□□ -0.44
LINC00539-203ENST00000434601 IQCF3P0C7M6 154 aa12.29□□□□□ -0.44
LINC00539-203ENST00000434601 GNAT1P11488 350 aa12.29□□□□□ -0.44
LINC00539-203ENST00000434601 POU3F3P20264 500 aaPredicted RBP12.29□□□□□ -0.44
LINC00539-203ENST00000434601 GARTP22102 1010 aa12.29□□□□□ -0.44
LINC00539-203ENST00000434601 HOXC8P31273 242 aa12.29□□□□□ -0.44
LINC00539-203ENST00000434601 PTENP60484 403 aa12.29□□□□□ -0.44
LINC00539-203ENST00000434601 PPP2R3AQ06190 1150 aa12.29□□□□□ -0.44
LINC00539-203ENST00000434601 POU5F1BQ06416 359 aa12.29□□□□□ -0.44
LINC00539-203ENST00000434601 MAPK6Q16659 721 aa12.29□□□□□ -0.44
LINC00539-203ENST00000434601 PTPN21Q16825 1174 aa12.29□□□□□ -0.44
LINC00539-203ENST00000434601 HS1BP3Q53T59 392 aa12.29□□□□□ -0.44
LINC00539-203ENST00000434601 SPECC1LQ69YQ0 1117 aa12.29□□□□□ -0.44
LINC00539-203ENST00000434601 C7orf31Q8N865 590 aa12.29□□□□□ -0.44
LINC00539-203ENST00000434601 XXYLT1Q8NBI6 393 aa12.29□□□□□ -0.44
LINC00539-203ENST00000434601 CAGE1Q8TC20 777 aa12.29□□□□□ -0.44
LINC00539-203ENST00000434601 ADAMTS19Q8TE59 1207 aa12.29□□□□□ -0.44
LINC00539-203ENST00000434601 VWCEQ96DN2 955 aa12.29□□□□□ -0.44
LINC00539-203ENST00000434601 MRPL4Q9BYD3 311 aaKnown RBP12.29□□□□□ -0.44
LINC00539-203ENST00000434601 NDST4Q9H3R1 872 aa12.29□□□□□ -0.44
LINC00539-203ENST00000434601 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.29□□□□□ -0.44
LINC00539-203ENST00000434601 MAPK13O15264 365 aa12.28□□□□□ -0.44
LINC00539-203ENST00000434601 VTNP04004 478 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms