RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 MUC13Q9H3R2 512 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 IP6K2Q9UHH9 426 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 ENOPH1Q9UHY7 261 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 NOP56O00567 594 aaKnown RBP4.01□□□□□ -1.77
SHPRH-205ENST00000433355 CIB2O75838 187 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 DPY19L2Q6NUT2 758 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 NEK10Q6ZWH5 1172 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 PNMA8AQ86V59 439 aaPredicted RBP4.01□□□□□ -1.77
SHPRH-205ENST00000433355 TXNRD3Q86VQ6 643 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 TMEM126BQ8IUX1 230 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 SERPINB12Q96P63 405 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 PABPC3Q9H361 631 aaKnown RBP4.01□□□□□ -1.77
SHPRH-205ENST00000433355 GDPD2Q9HCC8 539 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 STOML1Q9UBI4 398 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 IGKV6D-41A0A0C4DH26 115 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 CHUKO15111 745 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 HOXA2O43364 376 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 HIP1RO75146 1068 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 GYPCP04921 128 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 ACTN1P12814 892 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 HDAC4P56524 1084 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 MAPRE2Q15555 327 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 ADRM1Q16186 407 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 EFHC2Q5JST6 749 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 LRRC8EQ6NSJ5 796 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 TERB1Q8NA31 727 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 C19orf43Q9BQ61 176 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 EFHD1Q9BUP0 239 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 LZTFL1Q9NQ48 299 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 PSMD3O43242 534 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 PPIP5K2O43314 1243 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 GCNT3O95395 438 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 CYP11B2P19099 503 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 EIF4BP23588 611 aaKnown RBP4.01□□□□□ -1.77
SHPRH-205ENST00000433355 NAMPTP43490 491 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 CCT5P48643 541 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 GABPAQ06546 454 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 CRY1Q16526 586 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 SUSD4Q5VX71 490 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 CCDC144CPQ8IYA2 1237 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 MYCT1Q8N699 235 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 VCPKMTQ9H867 229 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 TRIM33Q9UPN9 1127 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 MAGEB16A2A368 324 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 LRRIQ3A6PVS8 624 aaPredicted RBP4.01□□□□□ -1.77
SHPRH-205ENST00000433355 SHOX2O60902 331 aaPredicted RBP4.01□□□□□ -1.77
SHPRH-205ENST00000433355 TOM1L1O75674 476 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 HEXIM1O94992 359 aaKnown RBP4.01□□□□□ -1.77
SHPRH-205ENST00000433355 CHGBP05060 677 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 VIL1P09327 827 aaKnown RBP4.01□□□□□ -1.77
SHPRH-205ENST00000433355 ATF2P15336 505 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 GPC5P78333 572 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 PADI6Q6TGC4 694 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 CCDC105Q8IYK2 499 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 ACMSDQ8TDX5 336 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 PPP4R1Q8TF05 950 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 AENQ8WTP8 325 aaKnown RBP4.01□□□□□ -1.77
SHPRH-205ENST00000433355 TNIP3Q96KP6 325 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 PRKD2Q9BZL6 878 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.01□□□□□ -1.77
SHPRH-205ENST00000433355 MAD2L2Q9UI95 211 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 EMSYQ7Z589 1322 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 ADGRA2Q96PE1 1338 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 LIN7AO14910 233 aaPredicted RBP4.01□□□□□ -1.77
SHPRH-205ENST00000433355 UCHL3P15374 230 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 ZNF174Q15697 407 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 SGSM1Q2NKQ1 1148 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 ZNF484Q5JVG2 852 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 ANKRD13CQ8N6S4 541 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 ZNF526Q8TF50 670 aaPredicted RBP4.01□□□□□ -1.77
SHPRH-205ENST00000433355 SLC35C1Q96A29 364 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 MTMR9Q96QG7 549 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 MAK16Q9BXY0 300 aaKnown RBP4.01□□□□□ -1.77
SHPRH-205ENST00000433355 CCDC134Q9H6E4 229 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 VTA1Q9NP79 307 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 ADAM21Q9UKJ8 722 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 C2CD2Q9Y426 696 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 TYW5A2RUC4 315 aaKnown RBP4.01□□□□□ -1.77
SHPRH-205ENST00000433355 IL1BP01584 269 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 SKOR1P84550 965 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 BFSP1Q12934 665 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 CCDC117Q8IWD4 279 aaPredicted RBP4.01□□□□□ -1.77
SHPRH-205ENST00000433355 THNSL1Q8IYQ7 743 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 RCOR2Q8IZ40 523 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 BSNDQ8WZ55 320 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 PARK7Q99497 189 aaKnown RBP4.01□□□□□ -1.77
SHPRH-205ENST00000433355 KATNAL1Q9BW62 490 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 ZHX1Q9UKY1 873 aaPredicted RBP4.01□□□□□ -1.77
SHPRH-205ENST00000433355 CXorf51AA0A1B0GTR3 108 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 PABPN1LA6NDY0 278 aaKnown RBP4.01□□□□□ -1.77
SHPRH-205ENST00000433355 EXTL3O43909 919 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 TMEM191BP0C7N4 346 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 RARGP13631 454 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 ADSLP30566 484 aaPredicted RBP4.01□□□□□ -1.77
SHPRH-205ENST00000433355 OXCT1P55809 520 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 SPDYE2Q495Y8 402 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 NOL9Q5SY16 702 aaKnown RBP4.01□□□□□ -1.77
SHPRH-205ENST00000433355 ARMCX5Q6P1M9 558 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 UNC93AQ86WB7 457 aa4.01□□□□□ -1.77
SHPRH-205ENST00000433355 MAPKAPK5Q8IW41 473 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms