RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 CYFIP2Q96F07 1278 aa12.09□□□□□ -0.47
SEC16A-206ENST00000431893 DENND3A2RUS2 1198 aa12.09□□□□□ -0.47
SEC16A-206ENST00000431893 KRT8P05787 483 aa12.09□□□□□ -0.47
SEC16A-206ENST00000431893 PCP11498 1178 aaKnown RBP12.09□□□□□ -0.47
SEC16A-206ENST00000431893 PADI6Q6TGC4 694 aa12.09□□□□□ -0.47
SEC16A-206ENST00000431893 CCDC81Q6ZN84 652 aa12.09□□□□□ -0.47
SEC16A-206ENST00000431893 ELMO2Q96JJ3 720 aa12.09□□□□□ -0.47
SEC16A-206ENST00000431893 SH3GL3Q99963 347 aa12.09□□□□□ -0.47
SEC16A-206ENST00000431893 C20orf96Q9NUD7 363 aaPredicted RBP12.09□□□□□ -0.47
SEC16A-206ENST00000431893 AIM2O14862 343 aa12.09□□□□□ -0.47
SEC16A-206ENST00000431893 CENPAP49450 140 aa12.09□□□□□ -0.47
SEC16A-206ENST00000431893 NUMBP49757 651 aa12.09□□□□□ -0.47
SEC16A-206ENST00000431893 RMDN1Q96DB5 314 aa12.09□□□□□ -0.47
SEC16A-206ENST00000431893 CYP26B1Q9NR63 512 aa12.09□□□□□ -0.47
SEC16A-206ENST00000431893 TTC26A0AVF1 554 aa12.08□□□□□ -0.47
SEC16A-206ENST00000431893 USP17L10C9JJH3 530 aa12.08□□□□□ -0.47
SEC16A-206ENST00000431893 NLRP11P59045 1033 aaKnown RBP12.08□□□□□ -0.47
SEC16A-206ENST00000431893 TBC1D9BQ66K14 1250 aa12.08□□□□□ -0.47
SEC16A-206ENST00000431893 ASIC4Q96FT7 647 aa12.08□□□□□ -0.47
SEC16A-206ENST00000431893 KLF6Q99612 283 aaPredicted RBP12.08□□□□□ -0.47
SEC16A-206ENST00000431893 THTPAQ9BU02 230 aa12.08□□□□□ -0.47
SEC16A-206ENST00000431893 TRABDQ9H4I3 376 aa12.08□□□□□ -0.47
SEC16A-206ENST00000431893 RERGLQ9H628 205 aa12.08□□□□□ -0.47
SEC16A-206ENST00000431893 PCMTD2Q9NV79 361 aa12.08□□□□□ -0.47
SEC16A-206ENST00000431893 USE1Q9NZ43 259 aa12.08□□□□□ -0.47
SEC16A-206ENST00000431893 TSC22D2O75157 780 aa12.08□□□□□ -0.48
SEC16A-206ENST00000431893 IMPDH2P12268 514 aa12.08□□□□□ -0.48
SEC16A-206ENST00000431893 IFNAR1P17181 557 aa12.08□□□□□ -0.48
SEC16A-206ENST00000431893 RECQLP46063 649 aaPredicted RBP12.08□□□□□ -0.48
SEC16A-206ENST00000431893 PRELPP51888 382 aa12.08□□□□□ -0.48
SEC16A-206ENST00000431893 CCNA1P78396 465 aa12.08□□□□□ -0.48
SEC16A-206ENST00000431893 RASGRF1Q13972 1273 aa12.08□□□□□ -0.48
SEC16A-206ENST00000431893 KRT39Q6A163 491 aa12.08□□□□□ -0.48
SEC16A-206ENST00000431893 PPP1R2P3Q6NXS1 205 aa12.08□□□□□ -0.48
SEC16A-206ENST00000431893 RIN3Q8TB24 985 aa12.08□□□□□ -0.48
SEC16A-206ENST00000431893 CPA5Q8WXQ8 436 aa12.08□□□□□ -0.48
SEC16A-206ENST00000431893 ACAP3Q96P50 834 aa12.08□□□□□ -0.48
SEC16A-206ENST00000431893 ZMYM3Q14202 1370 aa12.08□□□□□ -0.48
SEC16A-206ENST00000431893 PPP3CCP48454 512 aa12.08□□□□□ -0.48
SEC16A-206ENST00000431893 P3H1Q32P28 736 aa12.08□□□□□ -0.48
SEC16A-206ENST00000431893 SRLQ86TD4 932 aa12.08□□□□□ -0.48
SEC16A-206ENST00000431893 TMCO5AQ8N6Q1 288 aa12.08□□□□□ -0.48
SEC16A-206ENST00000431893 CCDC17Q96LX7 622 aa12.08□□□□□ -0.48
SEC16A-206ENST00000431893 COPRSQ9NQ92 184 aa12.08□□□□□ -0.48
SEC16A-206ENST00000431893 IP6K2Q9UHH9 426 aa12.08□□□□□ -0.48
SEC16A-206ENST00000431893 CAB39Q9Y376 341 aaPredicted RBP12.08□□□□□ -0.48
SEC16A-206ENST00000431893 SNAP23O00161 211 aa12.08□□□□□ -0.48
SEC16A-206ENST00000431893 ANGPT2O15123 496 aa12.08□□□□□ -0.48
SEC16A-206ENST00000431893 CDH6P55285 790 aa12.08□□□□□ -0.48
SEC16A-206ENST00000431893 TWF2Q6IBS0 349 aaKnown RBP12.08□□□□□ -0.48
SEC16A-206ENST00000431893 DDX42Q86XP3 938 aaKnown RBP eCLIP12.08□□□□□ -0.48
SEC16A-206ENST00000431893 SHCBP1LQ9BZQ2 653 aa12.08□□□□□ -0.48
SEC16A-206ENST00000431893 SLC7A5P2Q9GIP4 190 aa12.08□□□□□ -0.48
SEC16A-206ENST00000431893 SENP1Q9P0U3 644 aa12.08□□□□□ -0.48
SEC16A-206ENST00000431893 SRP68Q9UHB9 627 aaKnown RBP12.08□□□□□ -0.48
SEC16A-206ENST00000431893 GH2P01242 217 aa12.08□□□□□ -0.48
SEC16A-206ENST00000431893 TXNRD1Q16881 649 aa12.08□□□□□ -0.48
SEC16A-206ENST00000431893 NAALADL2Q58DX5 795 aa12.08□□□□□ -0.48
SEC16A-206ENST00000431893 PPP4R3CPQ6ZMV5 832 aa12.08□□□□□ -0.48
SEC16A-206ENST00000431893 NDUFAF2Q8N183 169 aa12.08□□□□□ -0.48
SEC16A-206ENST00000431893 TMEM35BQ8NCS4 154 aa12.08□□□□□ -0.48
SEC16A-206ENST00000431893 DPF2Q92785 391 aa12.08□□□□□ -0.48
SEC16A-206ENST00000431893 MRPL40Q9NQ50 206 aaKnown RBP12.08□□□□□ -0.48
SEC16A-206ENST00000431893 MAST1Q9Y2H9 1570 aa12.07□□□□□ -0.48
SEC16A-206ENST00000431893 HSPA1AP0DMV8 641 aaKnown RBP12.07□□□□□ -0.48
SEC16A-206ENST00000431893 HSPA1BP0DMV9 641 aaKnown RBP12.07□□□□□ -0.48
SEC16A-206ENST00000431893 HEATR4Q86WZ0 1026 aa12.07□□□□□ -0.48
SEC16A-206ENST00000431893 SLC44A5Q8NCS7 719 aa12.07□□□□□ -0.48
SEC16A-206ENST00000431893 SYNDIG1Q9H7V2 258 aa12.07□□□□□ -0.48
SEC16A-206ENST00000431893 LOC102724428A0A0B4J2F2 783 aa12.07□□□□□ -0.48
SEC16A-206ENST00000431893 H0Y626 953 aa12.07□□□□□ -0.48
SEC16A-206ENST00000431893 CYP26A1O43174 497 aa12.07□□□□□ -0.48
SEC16A-206ENST00000431893 TRIM16O95361 564 aa12.07□□□□□ -0.48
SEC16A-206ENST00000431893 KRT75O95678 551 aa12.07□□□□□ -0.48
SEC16A-206ENST00000431893 SDC4P31431 198 aa12.07□□□□□ -0.48
SEC16A-206ENST00000431893 SIK1P57059 783 aa12.07□□□□□ -0.48
SEC16A-206ENST00000431893 EIF3EP60228 445 aaKnown RBP12.07□□□□□ -0.48
SEC16A-206ENST00000431893 SARM1Q6SZW1 724 aa12.07□□□□□ -0.48
SEC16A-206ENST00000431893 C17orf80Q9BSJ5 609 aa12.07□□□□□ -0.48
SEC16A-206ENST00000431893 ZBED2Q9BTP6 218 aa12.07□□□□□ -0.48
SEC16A-206ENST00000431893 CD248Q9HCU0 757 aa12.07□□□□□ -0.48
SEC16A-206ENST00000431893 PKD2L2Q9NZM6 624 aa12.07□□□□□ -0.48
SEC16A-206ENST00000431893 APOL1O14791 398 aa12.07□□□□□ -0.48
SEC16A-206ENST00000431893 SLFN12LQ6IEE8 588 aa12.07□□□□□ -0.48
SEC16A-206ENST00000431893 POLR3FQ9H1D9 316 aaPredicted RBP12.07□□□□□ -0.48
SEC16A-206ENST00000431893 LIMA1Q9UHB6 759 aaKnown RBP12.07□□□□□ -0.48
SEC16A-206ENST00000431893 ZNF518AQ6AHZ1 1483 aa12.07□□□□□ -0.48
SEC16A-206ENST00000431893 ZNF608Q9ULD9 1512 aaPredicted RBP12.07□□□□□ -0.48
SEC16A-206ENST00000431893 CFAP43Q8NDM7 1665 aa12.07□□□□□ -0.48
SEC16A-206ENST00000431893 HUS1O60921 280 aa12.07□□□□□ -0.48
SEC16A-206ENST00000431893 CALB1P05937 261 aa12.07□□□□□ -0.48
SEC16A-206ENST00000431893 HMBSP08397 361 aa12.07□□□□□ -0.48
SEC16A-206ENST00000431893 ATP6V1B1P15313 513 aa12.07□□□□□ -0.48
SEC16A-206ENST00000431893 MCAMP43121 646 aa12.07□□□□□ -0.48
SEC16A-206ENST00000431893 PCSK7Q16549 785 aa12.07□□□□□ -0.48
SEC16A-206ENST00000431893 SGO1Q5FBB7 561 aa12.07□□□□□ -0.48
SEC16A-206ENST00000431893 SLC10A5Q5PT55 438 aa12.07□□□□□ -0.48
SEC16A-206ENST00000431893 SWSAP1Q6NVH7 229 aa12.07□□□□□ -0.48
SEC16A-206ENST00000431893 FAM162AQ96A26 154 aa12.07□□□□□ -0.48
SEC16A-206ENST00000431893 SH2D3AQ9BRG2 576 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms