RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 FTLP02792 175 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 HMGCRP04035 888 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 NBPF7P0C2Y1 421 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 ECHS1P30084 290 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 KIR2DL3P43628 341 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 KCNQ1P51787 676 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 CACNB3P54284 484 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 GPSM2P81274 684 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 MTM1Q13496 603 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 NFYCQ13952 458 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 SSPNQ14714 243 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 RAB39AQ14964 217 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 KRT72Q14CN4 511 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 PCOLCEQ15113 449 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 RNF220Q5VTB9 566 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 AGBL4Q5VU57 503 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 DARS2Q6PI48 645 aaKnown RBP3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 APOA5Q6Q788 366 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 FAM180AQ6UWF9 173 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 MORC1Q86VD1 984 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 DRC7Q8IY82 874 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 TRMT2AQ8IZ69 625 aaKnown RBP3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 IFNL2Q8IZJ0 200 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 Q8N3U1 123 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 PLA2G15Q8NCC3 412 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 CASKIN2Q8WXE0 1202 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 CYFIP2Q96F07 1278 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 IL17RAQ96F46 866 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 FAM167AQ96KS9 214 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 PSMD1Q99460 953 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 SPATA25Q9BR10 227 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 PDCD2LQ9BRP1 358 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 BTBD1Q9H0C5 482 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 MANSC1Q9H8J5 431 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 C14orf93Q9H972 538 aaKnown RBP3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 GPRC5DQ9NZD1 345 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 NISCHQ9Y2I1 1504 aa3.99□□□□□ -1.77
HMGB1P27-201ENST00000431429 PMS2P1A4D2B8 440 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 C9orf118A6NHY6 69 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 LRRC14BA6NHZ5 514 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 MYO1FO00160 1098 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 FFAR3O14843 346 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 ALDH1A2O94788 518 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 ARIH2O95376 493 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 RPLP2P05387 115 aaKnown RBP3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 IFIT2P09913 472 aaKnown RBP3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 MYF5P13349 255 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 TYRP14679 529 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 PEX2P28328 305 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 MRE11P49959 708 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 IRAK1P51617 712 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 ADCY7P51828 1080 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 CASP5P51878 434 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 AK2P54819 239 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 ADAM15Q13444 863 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 POLD3Q15054 466 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 BRD3Q15059 726 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 TBR1Q16650 682 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 KIAA0753Q2KHM9 967 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 GAGE13Q4V321 117 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 FAM26FQ5R3K3 315 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 GORABQ5T7V8 394 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 CCDC149Q6ZUS6 474 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 ZNF572Q7Z3I7 529 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 FAM90A1Q86YD7 464 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 KLHL36Q8N4N3 616 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 DCBLD1Q8N8Z6 715 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 C3orf20Q8ND61 904 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 ZNF526Q8TF50 670 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 LRTOMTQ8WZ04 291 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 CFHR4Q92496 578 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 DACT3Q96B18 629 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 SLC7A6OSQ96CW6 309 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 ZC3H10Q96K80 434 aaKnown RBP3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 NT5C1BQ96P26 610 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 CARD11Q9BXL7 1154 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 ZMAT3Q9HA38 289 aaKnown RBP3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 CD320Q9NPF0 282 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 JADE2Q9NQC1 790 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 TLR9Q9NR96 1032 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 ING3Q9NXR8 418 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 FNIP2Q9P278 1114 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 IRAK3Q9Y616 596 aa3.98□□□□□ -1.77
HMGB1P27-201ENST00000431429 DDX3XO00571 662 aaKnown RBP eCLIP3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 ADCY6O43306 1168 aa3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 PRAMEF4O60810 478 aa3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 ITGA10O75578 1167 aa3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 FTH1P19P0C7X4 201 aa3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 ZNF888P0CJ79 500 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 VSIG10L2P0DP72 767 aa3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 TAL1P17542 331 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 MALP21145 153 aa3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 PCSK1P29120 753 aa3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 ADSLP30566 484 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 ARFIP2P53365 341 aa3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 CTXN1P60606 82 aa3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 SNAPC2Q13487 334 aa3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 PLS1Q14651 629 aa3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 KHDC1Q4VXA5 237 aaKnown RBP3.97□□□□□ -1.77
HMGB1P27-201ENST00000431429 EMC10Q5UCC4 262 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms