RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 WASF3Q9UPY6 502 aa7.85□□□□□ -1.15
PTPRK-211ENST00000429595 NUDCQ9Y266 331 aa7.85□□□□□ -1.15
PTPRK-211ENST00000429595 VCANP13611 3396 aa7.84□□□□□ -1.15
PTPRK-211ENST00000429595 PFASO15067 1338 aa7.84□□□□□ -1.15
PTPRK-211ENST00000429595 ZNF536O15090 1300 aa7.84□□□□□ -1.15
PTPRK-211ENST00000429595 C9orf118A6NHY6 69 aa7.84□□□□□ -1.15
PTPRK-211ENST00000429595 B2RBV5 119 aa7.84□□□□□ -1.15
PTPRK-211ENST00000429595 SNRPB2P08579 225 aaKnown RBP7.84□□□□□ -1.15
PTPRK-211ENST00000429595 LCP1P13796 627 aa7.84□□□□□ -1.15
PTPRK-211ENST00000429595 ECI1P42126 302 aa7.84□□□□□ -1.15
PTPRK-211ENST00000429595 NKX3-2P78367 333 aa7.84□□□□□ -1.15
PTPRK-211ENST00000429595 CDSNQ15517 529 aa7.84□□□□□ -1.15
PTPRK-211ENST00000429595 TESK1Q15569 626 aa7.84□□□□□ -1.15
PTPRK-211ENST00000429595 DENND5AQ6IQ26 1287 aa7.84□□□□□ -1.15
PTPRK-211ENST00000429595 KRTAP5-3Q6L8H2 238 aa7.84□□□□□ -1.15
PTPRK-211ENST00000429595 TMEM169Q96HH4 297 aa7.84□□□□□ -1.15
PTPRK-211ENST00000429595 RNPC3Q96LT9 517 aaKnown RBP7.84□□□□□ -1.15
PTPRK-211ENST00000429595 YTHDC1Q96MU7 727 aaKnown RBP7.84□□□□□ -1.15
PTPRK-211ENST00000429595 ZNF70Q9UC06 446 aaPredicted RBP7.84□□□□□ -1.15
PTPRK-211ENST00000429595 PCDHAC2Q9Y5I4 1007 aa7.84□□□□□ -1.15
PTPRK-211ENST00000429595 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.83□□□□□ -1.16
PTPRK-211ENST00000429595 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.83□□□□□ -1.16
PTPRK-211ENST00000429595 TCRBV5S2A0A599 114 aa7.83□□□□□ -1.16
PTPRK-211ENST00000429595 MEFVO15553 781 aaPredicted RBP7.83□□□□□ -1.16
PTPRK-211ENST00000429595 COL6A1P12109 1028 aa7.83□□□□□ -1.16
PTPRK-211ENST00000429595 HOXC12P31275 282 aa7.83□□□□□ -1.16
PTPRK-211ENST00000429595 MLLT6P55198 1093 aaPredicted RBP7.83□□□□□ -1.16
PTPRK-211ENST00000429595 KCNAB2Q13303 367 aa7.83□□□□□ -1.16
PTPRK-211ENST00000429595 ICAM4Q14773 271 aa7.83□□□□□ -1.16
PTPRK-211ENST00000429595 GLB1LQ6UWU2 654 aa7.83□□□□□ -1.16
PTPRK-211ENST00000429595 FASTKD5Q7L8L6 764 aaKnown RBP7.83□□□□□ -1.16
PTPRK-211ENST00000429595 DVL3Q92997 716 aaPredicted RBP7.83□□□□□ -1.16
PTPRK-211ENST00000429595 CFAP53Q96M91 514 aa7.83□□□□□ -1.16
PTPRK-211ENST00000429595 TMEM39BQ9GZU3 492 aa7.83□□□□□ -1.16
PTPRK-211ENST00000429595 TDRD3Q9H7E2 651 aaKnown RBP7.83□□□□□ -1.16
PTPRK-211ENST00000429595 NGRNQ9NPE2 291 aaKnown RBP7.83□□□□□ -1.16
PTPRK-211ENST00000429595 DDX60LQ5H9U9 1706 aaKnown RBP7.83□□□□□ -1.16
PTPRK-211ENST00000429595 PIEZO1Q92508 2521 aa7.82□□□□□ -1.16
PTPRK-211ENST00000429595 SMAD7O15105 426 aaKnown RBP7.82□□□□□ -1.16
PTPRK-211ENST00000429595 LAMTOR5O43504 91 aa7.82□□□□□ -1.16
PTPRK-211ENST00000429595 PDE8AO60658 829 aa7.82□□□□□ -1.16
PTPRK-211ENST00000429595 TADA3O75528 432 aa7.82□□□□□ -1.16
PTPRK-211ENST00000429595 NHLH1Q02575 133 aa7.82□□□□□ -1.16
PTPRK-211ENST00000429595 PROSER3Q2NL68 480 aa7.82□□□□□ -1.16
PTPRK-211ENST00000429595 ACBD5Q5T8D3 534 aaPredicted RBP7.82□□□□□ -1.16
PTPRK-211ENST00000429595 SLC16A11Q8NCK7 471 aa7.82□□□□□ -1.16
PTPRK-211ENST00000429595 CHST13Q8NET6 341 aa7.82□□□□□ -1.16
PTPRK-211ENST00000429595 PLBD2Q8NHP8 589 aa7.82□□□□□ -1.16
PTPRK-211ENST00000429595 ZCCHC14Q8WYQ9 949 aaKnown RBP7.82□□□□□ -1.16
PTPRK-211ENST00000429595 BADQ92934 168 aa7.82□□□□□ -1.16
PTPRK-211ENST00000429595 TIFAQ96CG3 184 aa7.82□□□□□ -1.16
PTPRK-211ENST00000429595 MRRFQ96E11 262 aaKnown RBP7.82□□□□□ -1.16
PTPRK-211ENST00000429595 YIPF4Q9BSR8 244 aa7.82□□□□□ -1.16
PTPRK-211ENST00000429595 TGIF2Q9GZN2 237 aa7.82□□□□□ -1.16
PTPRK-211ENST00000429595 ANKRD2Q9GZV1 360 aa7.82□□□□□ -1.16
PTPRK-211ENST00000429595 DTLQ9NZJ0 730 aa7.82□□□□□ -1.16
PTPRK-211ENST00000429595 KIAA1522Q9P206 1035 aaPredicted RBP7.82□□□□□ -1.16
PTPRK-211ENST00000429595 ATP11BQ9Y2G3 1177 aa7.82□□□□□ -1.16
PTPRK-211ENST00000429595 HGSO14964 777 aaPredicted RBP7.81□□□□□ -1.16
PTPRK-211ENST00000429595 LRG1P02750 347 aa7.81□□□□□ -1.16
PTPRK-211ENST00000429595 EMC4Q5J8M3 183 aa7.81□□□□□ -1.16
PTPRK-211ENST00000429595 MRM1Q6IN84 353 aaKnown RBP7.81□□□□□ -1.16
PTPRK-211ENST00000429595 TEPPQ6URK8 271 aa7.81□□□□□ -1.16
PTPRK-211ENST00000429595 GADL1Q6ZQY3 521 aa7.81□□□□□ -1.16
PTPRK-211ENST00000429595 CCDC129Q6ZRS4 1044 aa7.81□□□□□ -1.16
PTPRK-211ENST00000429595 SPRED1Q7Z699 444 aa7.81□□□□□ -1.16
PTPRK-211ENST00000429595 PPIL6Q8IXY8 311 aa7.81□□□□□ -1.16
PTPRK-211ENST00000429595 TOE1Q96GM8 510 aaKnown RBP7.81□□□□□ -1.16
PTPRK-211ENST00000429595 C1orf159Q96HA4 380 aa7.81□□□□□ -1.16
PTPRK-211ENST00000429595 ISCA1Q9BUE6 129 aa7.81□□□□□ -1.16
PTPRK-211ENST00000429595 ZNF341Q9BYN7 854 aa7.81□□□□□ -1.16
PTPRK-211ENST00000429595 PRDM12Q9H4Q4 367 aa7.81□□□□□ -1.16
PTPRK-211ENST00000429595 CD209Q9NNX6 404 aa7.81□□□□□ -1.16
PTPRK-211ENST00000429595 TMOD2Q9NZR1 351 aa7.81□□□□□ -1.16
PTPRK-211ENST00000429595 INPP5FQ9Y2H2 1132 aa7.81□□□□□ -1.16
PTPRK-211ENST00000429595 COA3Q9Y2R0 106 aaPredicted RBP7.81□□□□□ -1.16
PTPRK-211ENST00000429595 PCDHB4Q9Y5E5 795 aa7.81□□□□□ -1.16
PTPRK-211ENST00000429595 PCDHA2Q9Y5H9 948 aa7.81□□□□□ -1.16
PTPRK-211ENST00000429595 CXCL11O14625 94 aa7.8□□□□□ -1.16
PTPRK-211ENST00000429595 GPR42O15529 346 aa7.8□□□□□ -1.16
PTPRK-211ENST00000429595 SUSD5O60279 629 aa7.8□□□□□ -1.16
PTPRK-211ENST00000429595 ATF4P18848 351 aaPredicted RBP7.8□□□□□ -1.16
PTPRK-211ENST00000429595 IGHMBP2P38935 993 aaKnown RBP7.8□□□□□ -1.16
PTPRK-211ENST00000429595 GFRA1P56159 465 aa7.8□□□□□ -1.16
PTPRK-211ENST00000429595 CNGB1Q14028 1251 aaPredicted RBP7.8□□□□□ -1.16
PTPRK-211ENST00000429595 SV2CQ496J9 727 aa7.8□□□□□ -1.16
PTPRK-211ENST00000429595 PKN3Q6P5Z2 889 aa7.8□□□□□ -1.16
PTPRK-211ENST00000429595 LRP10Q7Z4F1 713 aa7.8□□□□□ -1.16
PTPRK-211ENST00000429595 FAM178BQ8IXR5 827 aa7.8□□□□□ -1.16
PTPRK-211ENST00000429595 Q8N1X5 172 aa7.8□□□□□ -1.16
PTPRK-211ENST00000429595 CERS5Q8N5B7 392 aa7.8□□□□□ -1.16
PTPRK-211ENST00000429595 ANKRD13CQ8N6S4 541 aa7.8□□□□□ -1.16
PTPRK-211ENST00000429595 TMEM145Q8NBT3 493 aa7.8□□□□□ -1.16
PTPRK-211ENST00000429595 SCAND2PQ9GZW5 306 aaPredicted RBP7.8□□□□□ -1.16
PTPRK-211ENST00000429595 KCNH6Q9H252 994 aa7.8□□□□□ -1.16
PTPRK-211ENST00000429595 CD248Q9HCU0 757 aa7.8□□□□□ -1.16
PTPRK-211ENST00000429595 TSPYL4Q9UJ04 414 aa7.8□□□□□ -1.16
PTPRK-211ENST00000429595 MRVI1Q9Y6F6 885 aa7.8□□□□□ -1.16
PTPRK-211ENST00000429595 OTOFQ9HC10 1997 aa7.8□□□□□ -1.16
PTPRK-211ENST00000429595 H7BY64 318 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms