RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 KATNAL1Q9BW62 490 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 NEUROG2Q9H2A3 272 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 FAM217BQ9NTX9 383 aaPredicted RBP13.54□□□□□ -0.24
LDB3-205ENST00000429277 BRAFP15056 766 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 UGP2Q16851 508 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 NUDCD3Q8IVD9 361 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 MTIF3Q9H2K0 278 aaKnown RBP13.54□□□□□ -0.24
LDB3-205ENST00000429277 DYRK4Q9NR20 520 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 MOSPD1Q9UJG1 213 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 A0A087WWV3 80 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 HDAC4P56524 1084 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 PTPN21Q16825 1174 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 XKR3Q5GH77 459 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 ZBTB41Q5SVQ8 909 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 C1orf146Q5VVC0 180 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 WWP1Q9H0M0 922 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 OLFML3Q9NRN5 406 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 KCNH4Q9UQ05 1017 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 POTEFA5A3E0 1075 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 CFAP69A5D8W1 941 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 KRT16P08779 473 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 POTEIP0CG38 1075 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 PDIA2Q13087 525 aaKnown RBP13.54□□□□□ -0.24
LDB3-205ENST00000429277 CCDC137Q6PK04 289 aaKnown RBP13.54□□□□□ -0.24
LDB3-205ENST00000429277 POTEGQ6S5H5 508 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 POTEEQ6S8J3 1075 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 CCNYL1Q8N7R7 359 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 PGBD4Q96DM1 585 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 PLA2G12BQ9BX93 195 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 ADGRG1Q9Y653 693 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 GSG1L2A8MUP6 293 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 C19orf81C9J6K1 198 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 CYBBP04839 570 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 MED21Q13503 144 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 CC2D1AQ6P1N0 951 aaPredicted RBP13.54□□□□□ -0.24
LDB3-205ENST00000429277 KIF12Q96FN5 646 aa13.54□□□□□ -0.24
LDB3-205ENST00000429277 NAF1Q96HR8 494 aaKnown RBP13.54□□□□□ -0.24
LDB3-205ENST00000429277 DHX35Q9H5Z1 703 aaKnown RBP13.54□□□□□ -0.24
LDB3-205ENST00000429277 JPH1Q9HDC5 661 aaPredicted RBP13.54□□□□□ -0.24
LDB3-205ENST00000429277 PI4K2BG5E9Z4 385 aa13.53□□□□□ -0.24
LDB3-205ENST00000429277 LBRQ14739 615 aaKnown RBP13.53□□□□□ -0.24
LDB3-205ENST00000429277 RCOR2Q8IZ40 523 aa13.53□□□□□ -0.24
LDB3-205ENST00000429277 ATL2Q8NHH9 583 aa13.53□□□□□ -0.24
LDB3-205ENST00000429277 KDM6AO15550 1401 aaPredicted RBP13.53□□□□□ -0.24
LDB3-205ENST00000429277 TYK2P29597 1187 aa13.53□□□□□ -0.24
LDB3-205ENST00000429277 MAGEA9P43362 315 aa13.53□□□□□ -0.24
LDB3-205ENST00000429277 ACTR2P61160 394 aa13.53□□□□□ -0.24
LDB3-205ENST00000429277 MAGOHP61326 146 aaKnown RBP13.53□□□□□ -0.24
LDB3-205ENST00000429277 AP1B1Q10567 949 aa13.53□□□□□ -0.24
LDB3-205ENST00000429277 ANO4Q32M45 955 aa13.53□□□□□ -0.24
LDB3-205ENST00000429277 ANKS3Q6ZW76 656 aa13.53□□□□□ -0.24
LDB3-205ENST00000429277 AGPAT1Q99943 283 aa13.53□□□□□ -0.24
LDB3-205ENST00000429277 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.53□□□□□ -0.24
LDB3-205ENST00000429277 EMSYQ7Z589 1322 aa13.53□□□□□ -0.24
LDB3-205ENST00000429277 PLA2R1Q13018 1463 aa13.53□□□□□ -0.24
LDB3-205ENST00000429277 CACNB3P54284 484 aa13.53□□□□□ -0.24
LDB3-205ENST00000429277 EPHA10Q5JZY3 1008 aa13.53□□□□□ -0.24
LDB3-205ENST00000429277 PIDD1Q9HB75 910 aa13.53□□□□□ -0.24
LDB3-205ENST00000429277 TJP2Q9UDY2 1190 aa13.53□□□□□ -0.24
LDB3-205ENST00000429277 PCSK1NQ9UHG2 260 aa13.53□□□□□ -0.24
LDB3-205ENST00000429277 FAM95CA0A1B0GW59 222 aa13.53□□□□□ -0.24
LDB3-205ENST00000429277 MAGEB2O15479 319 aa13.53□□□□□ -0.24
LDB3-205ENST00000429277 CPB1P15086 417 aa13.53□□□□□ -0.24
LDB3-205ENST00000429277 HADHAP40939 763 aa13.53□□□□□ -0.24
LDB3-205ENST00000429277 KCNJ6P48051 423 aa13.53□□□□□ -0.24
LDB3-205ENST00000429277 POU5F1BQ06416 359 aa13.53□□□□□ -0.24
LDB3-205ENST00000429277 CELF1Q92879 486 aaKnown RBP13.53□□□□□ -0.24
LDB3-205ENST00000429277 TSPAN17Q96FV3 270 aa13.53□□□□□ -0.24
LDB3-205ENST00000429277 SMG5Q9UPR3 1016 aaKnown RBP13.53□□□□□ -0.24
LDB3-205ENST00000429277 TNS3Q68CZ2 1445 aa13.52□□□□□ -0.24
LDB3-205ENST00000429277 RNF103-CHMP3A0A140T963 221 aa13.52□□□□□ -0.24
LDB3-205ENST00000429277 CDH6P55285 790 aa13.52□□□□□ -0.24
LDB3-205ENST00000429277 P3H1Q32P28 736 aa13.52□□□□□ -0.24
LDB3-205ENST00000429277 IZUMO3Q5VZ72 239 aa13.52□□□□□ -0.24
LDB3-205ENST00000429277 LDHDQ86WU2 507 aa13.52□□□□□ -0.24
LDB3-205ENST00000429277 PPHLN1Q8NEY8 458 aaKnown RBP13.52□□□□□ -0.24
LDB3-205ENST00000429277 ATP6V1G3Q96LB4 118 aa13.52□□□□□ -0.24
LDB3-205ENST00000429277 CHGBP05060 677 aa13.52□□□□□ -0.24
LDB3-205ENST00000429277 STAT5BP51692 787 aa13.52□□□□□ -0.24
LDB3-205ENST00000429277 RBP5P82980 135 aa13.52□□□□□ -0.24
LDB3-205ENST00000429277 PDCLQ13371 301 aa13.52□□□□□ -0.24
LDB3-205ENST00000429277 SBK1Q52WX2 424 aa13.52□□□□□ -0.24
LDB3-205ENST00000429277 ZBED8Q8IZ13 594 aa13.52□□□□□ -0.24
LDB3-205ENST00000429277 OXER1Q8TDS5 423 aa13.52□□□□□ -0.24
LDB3-205ENST00000429277 FOPNLQ96NB1 174 aa13.52□□□□□ -0.24
LDB3-205ENST00000429277 MED15Q96RN5 788 aa13.52□□□□□ -0.24
LDB3-205ENST00000429277 CRAMP1Q96RY5 1269 aa13.52□□□□□ -0.24
LDB3-205ENST00000429277 NSMCE4AQ9NXX6 385 aa13.52□□□□□ -0.24
LDB3-205ENST00000429277 KIF17Q9P2E2 1029 aa13.52□□□□□ -0.24
LDB3-205ENST00000429277 TET3O43151 1660 aa13.52□□□□□ -0.25
LDB3-205ENST00000429277 SSU72P8A0A1W2PR75 194 aa13.52□□□□□ -0.25
LDB3-205ENST00000429277 ARHGAP10A1A4S6 786 aa13.52□□□□□ -0.25
LDB3-205ENST00000429277 SNX17Q15036 470 aa13.52□□□□□ -0.25
LDB3-205ENST00000429277 ARHGAP18Q8N392 663 aa13.52□□□□□ -0.25
LDB3-205ENST00000429277 SH3KBP1Q96B97 665 aa13.52□□□□□ -0.25
LDB3-205ENST00000429277 GPR101Q96P66 508 aaPredicted RBP13.52□□□□□ -0.25
LDB3-205ENST00000429277 TGS1Q96RS0 853 aaKnown RBP13.52□□□□□ -0.25
LDB3-205ENST00000429277 CYTH2Q99418 400 aa13.52□□□□□ -0.25
LDB3-205ENST00000429277 ADCY10Q96PN6 1610 aa13.52□□□□□ -0.25
LDB3-205ENST00000429277 TTC26A0AVF1 554 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms