RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 SNX9Q9Y5X1 595 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 ACTN4O43707 911 aaKnown RBP7.75□□□□□ -1.17
CNOT4-206ENST00000428680 IRF1P10914 325 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 DRP2Q13474 957 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 IQCB1Q15051 598 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 MEI1Q5TIA1 1274 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 ATP2A3Q93084 1043 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 TRIM11Q96F44 468 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 STMN4Q9H169 189 aaPredicted RBP7.75□□□□□ -1.17
CNOT4-206ENST00000428680 HIPK3Q9H422 1215 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 EMILIN3Q9NT22 766 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 URB1O60287 2271 aaKnown RBP7.75□□□□□ -1.17
CNOT4-206ENST00000428680 ORC4O43929 436 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 ATP2C2O75185 946 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 GSTA1P08263 222 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 HMBSP08397 361 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 GSTA2P09210 222 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 RFC5P40937 340 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 FKBP3Q00688 224 aaKnown RBP7.75□□□□□ -1.17
CNOT4-206ENST00000428680 LRRC41Q15345 812 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 PREPLQ4J6C6 727 aaPredicted RBP7.75□□□□□ -1.17
CNOT4-206ENST00000428680 PPM1LQ5SGD2 360 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 TMTC4Q5T4D3 741 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 IQSEC1Q6DN90 963 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 TMCO3Q6UWJ1 677 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 SYCE1Q8N0S2 351 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 MAP4K1Q92918 833 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 TINF2Q9BSI4 451 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 CALN1Q9BXU9 219 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 TSGA10Q9BZW7 698 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.75□□□□□ -1.17
CNOT4-206ENST00000428680 PLIN4Q96Q06 1357 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 CTAGE9A4FU28 777 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 SAT1P21673 171 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 MCM6Q14566 821 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 PEX26Q7Z412 305 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 ZNF589Q86UQ0 364 aaPredicted RBP7.75□□□□□ -1.17
CNOT4-206ENST00000428680 RAB42Q8N4Z0 105 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 ENAHQ8N8S7 591 aaPredicted RBP7.75□□□□□ -1.17
CNOT4-206ENST00000428680 XXYLT1Q8NBI6 393 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 ALKBH8Q96BT7 664 aaKnown RBP7.75□□□□□ -1.17
CNOT4-206ENST00000428680 YIPF2Q9BWQ6 316 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 TLE6Q9H808 572 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 CYP4F11Q9HBI6 524 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 ABI2Q9NYB9 513 aaPredicted RBP7.75□□□□□ -1.17
CNOT4-206ENST00000428680 PCDHB6Q9Y5E3 794 aa7.75□□□□□ -1.17
CNOT4-206ENST00000428680 FOCADQ5VW36 1801 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 DTNBO60941 627 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 USP11P51784 963 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 RBP5P82980 135 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 GRM4Q14833 912 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 RPS6KA2Q15349 733 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 ZNF484Q5JVG2 852 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 C6orf163Q5TEZ5 329 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 ITIH5Q86UX2 942 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 ERICH1Q86X53 443 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 CCDC105Q8IYK2 499 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 USP6NLQ92738 828 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 ZNF558Q96NG5 402 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 PRRX2Q99811 253 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 UNC93B1Q9H1C4 597 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 SH3GLB2Q9NR46 395 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 AGAP1Q9UPQ3 857 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.74□□□□□ -1.17
CNOT4-206ENST00000428680 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.74□□□□□ -1.17
CNOT4-206ENST00000428680 H0YGN5 161 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 LRRN2O75325 713 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 ICAM1P05362 532 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 EN2P19622 333 aaPredicted RBP7.74□□□□□ -1.17
CNOT4-206ENST00000428680 RPL10AP62906 217 aaKnown RBP7.74□□□□□ -1.17
CNOT4-206ENST00000428680 PRKCQQ04759 706 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 GTF2H3Q13889 308 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 SEPT6Q14141 434 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 MAPRE1Q15691 268 aaKnown RBP7.74□□□□□ -1.17
CNOT4-206ENST00000428680 KIZQ2M2Z5 673 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 RFX6Q8HWS3 928 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 CCDC110Q8TBZ0 833 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 EEF2KMTQ96G04 330 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 KAZALD1Q96I82 304 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 CEP63Q96MT8 703 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 IFNKQ9P0W0 207 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 FZD1Q9UP38 647 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 AKR1B15C9JRZ8 316 aaPredicted RBP7.74□□□□□ -1.17
CNOT4-206ENST00000428680 ZW10O43264 779 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 CDC25AP30304 524 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 SOX5P35711 763 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 HARS2P49590 506 aaKnown RBP7.74□□□□□ -1.17
CNOT4-206ENST00000428680 FBXW4P57775 412 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 CDK17Q00537 523 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 MDM2Q00987 491 aaPredicted RBP7.74□□□□□ -1.17
CNOT4-206ENST00000428680 PRKCEQ02156 737 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 EIF2B5Q13144 721 aaKnown RBP7.74□□□□□ -1.17
CNOT4-206ENST00000428680 NR5A1Q13285 461 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 TMEM132DQ14C87 1099 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 CDO1Q16878 200 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 CTXN3Q4LDR2 81 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 ZNF280DQ6N043 979 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 NT5DC4Q86YG4 428 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 PHOSPHO2Q8TCD6 241 aa7.74□□□□□ -1.17
CNOT4-206ENST00000428680 RIC8AQ9NPQ8 531 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms