RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 HIST1H2AGP0C0S8 130 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-208ENST00000428599 HIST1H2ADP20671 130 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 EZH2Q15910 746 aaKnown RBP9.48□□□□□ -0.89
CTNND1-208ENST00000428599 PADI6Q6TGC4 694 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 CCNYL1Q8N7R7 359 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 XXYLT1Q8NBI6 393 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 HIST1H2AHQ96KK5 128 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 DNAJC7Q99615 494 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 HIST1H2AJQ99878 128 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 H2AFJQ9BTM1 129 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 NDST4Q9H3R1 872 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 ACAD9Q9H845 621 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 AIPL1Q9NZN9 384 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 MAN1B1Q9UKM7 699 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 RFX7Q2KHR2 1363 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 CNTNAP4Q9C0A0 1308 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 C5orf58C9J3I9 102 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 ZFXP17010 805 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-208ENST00000428599 CDK17Q00537 523 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 CDC42EP1Q00587 391 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 SPARCL1Q14515 664 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 ADCK2Q7Z695 626 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 OTULINQ96BN8 352 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 FAM213AQ9BRX8 229 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 DFFAO00273 331 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 CTIFO43310 598 aaKnown RBP9.48□□□□□ -0.89
CTNND1-208ENST00000428599 KRT4P19013 534 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 AP3M2P53677 418 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 CAV1Q03135 178 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 TOB2Q14106 344 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-208ENST00000428599 STRIP1Q5VSL9 837 aa9.48□□□□□ -0.89
CTNND1-208ENST00000428599 ARL6IP4Q66PJ3 421 aaKnown RBP9.48□□□□□ -0.89
CTNND1-208ENST00000428599 ST13P4Q8IZP2 240 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-208ENST00000428599 TSR3Q9UJK0 312 aaKnown RBP9.48□□□□□ -0.89
CTNND1-208ENST00000428599 MIF4GDA9UHW6 222 aaKnown RBP9.47□□□□□ -0.89
CTNND1-208ENST00000428599 NTSR2O95665 410 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 FDX1P10109 184 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 NR1H3Q13133 447 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 PPP1R13BQ96KQ4 1090 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 EML4Q9HC35 981 aaKnown RBP9.47□□□□□ -0.89
CTNND1-208ENST00000428599 CNOT7Q9UIV1 285 aaKnown RBP9.47□□□□□ -0.89
CTNND1-208ENST00000428599 DNAJC12Q9UKB3 198 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 FER1L4A9Z1Z3 1794 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 SYNGAP1Q96PV0 1343 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 F5H6K3 240 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 ARHGEF9O43307 516 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 ZRANB2O95218 330 aaKnown RBP eCLIP9.47□□□□□ -0.897e-11■■■■■ 70
CTNND1-208ENST00000428599 KLRC3Q07444 240 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 PDCLQ13371 301 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 PFKFB3Q16875 520 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-208ENST00000428599 OR6P1Q8NGX9 317 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 RAPGEF5Q92565 580 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 BTBD6Q96KE9 485 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 TNIP3Q96KP6 325 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 MXD3Q9BW11 206 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 KATNAL1Q9BW62 490 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 TMEM60Q9H2L4 133 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 RUBCNLQ9H714 662 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 LY9Q9HBG7 655 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 BFARQ9NZS9 450 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 PPARGC1AQ9UBK2 798 aaKnown RBP9.47□□□□□ -0.89
CTNND1-208ENST00000428599 INTUQ9ULD6 942 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 NFU1Q9UMS0 254 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 USP17L15C9J2P7 530 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 USP17L13C9JLJ4 530 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 USP17L11C9JVI0 530 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 USP17L18D6R9N7 530 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 USP17L22D6RA61 530 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 USP17L17D6RBQ6 530 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 USP17L19D6RCP7 530 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 USP17L20D6RJB6 530 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 USP17L24Q0WX57 530 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 RESTQ13127 1097 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 PPP1R18Q6NYC8 613 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 USP17L6PQ6QN14 398 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 OR6J1Q8NGC5 347 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 B4GALNT2Q8NHY0 566 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 BTN2A2Q8WVV5 523 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 NSUN4Q96CB9 384 aaKnown RBP9.47□□□□□ -0.89
CTNND1-208ENST00000428599 ZMAT2Q96NC0 199 aaKnown RBP9.47□□□□□ -0.89
CTNND1-208ENST00000428599 DDX56Q9NY93 547 aaKnown RBP9.47□□□□□ -0.89
CTNND1-208ENST00000428599 IP6K2Q9UHH9 426 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 HERC5Q9UII4 1024 aaKnown RBP9.47□□□□□ -0.89
CTNND1-208ENST00000428599 MAN1A2O60476 641 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 KRT7P08729 469 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 STAT3P40763 770 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 ALX1Q15699 326 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 TJAP1Q5JTD0 557 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 ALKBH5Q6P6C2 394 aaKnown RBP9.47□□□□□ -0.89
CTNND1-208ENST00000428599 PIGOQ8TEQ8 1089 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 SPATA16Q9BXB7 569 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 AP1M1Q9BXS5 423 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 SIK2Q9H0K1 926 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 POLR3FQ9H1D9 316 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-208ENST00000428599 GJB4Q9NTQ9 266 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 FAM217BQ9NTX9 383 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-208ENST00000428599 NOVA2Q9UNW9 492 aaKnown RBP9.47□□□□□ -0.89
CTNND1-208ENST00000428599 SFI1A8K8P3 1242 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 TADA2AO75478 443 aa9.47□□□□□ -0.89
CTNND1-208ENST00000428599 ACSL3O95573 720 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms