RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 PROZP22891 400 aa13.14□□□□□ -0.31
RFC4-206ENST00000427785 TNFSF9P41273 254 aa13.14□□□□□ -0.31
RFC4-206ENST00000427785 ACOT2P49753 483 aa13.14□□□□□ -0.31
RFC4-206ENST00000427785 VAMP7P51809 220 aa13.14□□□□□ -0.31
RFC4-206ENST00000427785 WNT7BP56706 349 aa13.14□□□□□ -0.31
RFC4-206ENST00000427785 DLG4P78352 724 aa13.14□□□□□ -0.31
RFC4-206ENST00000427785 MYL7Q01449 175 aa13.14□□□□□ -0.31
RFC4-206ENST00000427785 CYP24A1Q07973 514 aa13.14□□□□□ -0.31
RFC4-206ENST00000427785 TSHZ1Q6ZSZ6 1077 aa13.14□□□□□ -0.31
RFC4-206ENST00000427785 INTS8Q75QN2 995 aaKnown RBP13.14□□□□□ -0.31
RFC4-206ENST00000427785 CATSPER4Q7RTX7 472 aa13.14□□□□□ -0.31
RFC4-206ENST00000427785 CCDC186Q7Z3E2 898 aa13.14□□□□□ -0.31
RFC4-206ENST00000427785 CEP120Q8N960 986 aa13.14□□□□□ -0.31
RFC4-206ENST00000427785 TMEM174Q8WUU8 243 aa13.14□□□□□ -0.31
RFC4-206ENST00000427785 FAM84AQ96KN4 292 aa13.14□□□□□ -0.31
RFC4-206ENST00000427785 FBXL18Q96ME1 805 aa13.14□□□□□ -0.31
RFC4-206ENST00000427785 PCMTD1Q96MG8 357 aaPredicted RBP13.14□□□□□ -0.31
RFC4-206ENST00000427785 TCHPQ9BT92 498 aa13.14□□□□□ -0.31
RFC4-206ENST00000427785 LSM14BQ9BX40 385 aaKnown RBP13.14□□□□□ -0.31
RFC4-206ENST00000427785 OGDHLQ9ULD0 1010 aa13.14□□□□□ -0.31
RFC4-206ENST00000427785 NOD1Q9Y239 953 aa13.14□□□□□ -0.31
RFC4-206ENST00000427785 TNFSF13BQ9Y275 285 aa13.14□□□□□ -0.31
RFC4-206ENST00000427785 TDRD15B5MCY1 1934 aaKnown RBP13.13□□□□□ -0.31
RFC4-206ENST00000427785 ALPK3Q96L96 1907 aa13.13□□□□□ -0.31
RFC4-206ENST00000427785 A0A1W2PQC6 194 aa13.13□□□□□ -0.31
RFC4-206ENST00000427785 KIAA0391O15091 583 aaKnown RBP13.13□□□□□ -0.31
RFC4-206ENST00000427785 MAPK13O15264 365 aa13.13□□□□□ -0.31
RFC4-206ENST00000427785 CLDN3O15551 220 aa13.13□□□□□ -0.31
RFC4-206ENST00000427785 FAM189A1O60320 539 aa13.13□□□□□ -0.31
RFC4-206ENST00000427785 B4GALT4O60513 344 aa13.13□□□□□ -0.31
RFC4-206ENST00000427785 SFPQP23246 707 aaKnown RBP eCLIP13.13□□□□□ -0.31
RFC4-206ENST00000427785 PTPN11Q06124 597 aaPredicted RBP13.13□□□□□ -0.31
RFC4-206ENST00000427785 PPP2R3AQ06190 1150 aa13.13□□□□□ -0.31
RFC4-206ENST00000427785 MCL1Q07820 350 aa13.13□□□□□ -0.31
RFC4-206ENST00000427785 TBX2Q13207 712 aaPredicted RBP13.13□□□□□ -0.31
RFC4-206ENST00000427785 C1orf220Q5T0J3 134 aa13.13□□□□□ -0.31
RFC4-206ENST00000427785 LMBRD2Q68DH5 695 aaPredicted RBP13.13□□□□□ -0.31
RFC4-206ENST00000427785 CRELD2Q6UXH1 353 aaPredicted RBP13.13□□□□□ -0.31
RFC4-206ENST00000427785 RSPH3Q86UC2 560 aa13.13□□□□□ -0.31
RFC4-206ENST00000427785 CCDC127Q96BQ5 260 aa13.13□□□□□ -0.31
RFC4-206ENST00000427785 TRIM44Q96DX7 344 aaPredicted RBP13.13□□□□□ -0.31
RFC4-206ENST00000427785 PRIMPOLQ96LW4 560 aa13.13□□□□□ -0.31
RFC4-206ENST00000427785 ERGIC2Q96RQ1 377 aa13.13□□□□□ -0.31
RFC4-206ENST00000427785 CRACR2AQ9BSW2 395 aa13.13□□□□□ -0.31
RFC4-206ENST00000427785 CELF4Q9BZC1 486 aaKnown RBP13.13□□□□□ -0.31
RFC4-206ENST00000427785 SENP6Q9GZR1 1112 aaPredicted RBP13.13□□□□□ -0.31
RFC4-206ENST00000427785 PTPRHQ9HD43 1115 aa13.13□□□□□ -0.31
RFC4-206ENST00000427785 RBAKQ9NYW8 714 aaPredicted RBP13.13□□□□□ -0.31
RFC4-206ENST00000427785 IMPACTQ9P2X3 320 aa13.13□□□□□ -0.31
RFC4-206ENST00000427785 SIK3Q9Y2K2 1263 aa13.13□□□□□ -0.31
RFC4-206ENST00000427785 CEP350Q5VT06 3117 aa13.13□□□□□ -0.31
RFC4-206ENST00000427785 ZNF233A6NK53 670 aa13.12□□□□□ -0.31
RFC4-206ENST00000427785 LRRIQ3A6PVS8 624 aaPredicted RBP13.12□□□□□ -0.31
RFC4-206ENST00000427785 EPHB6O15197 1021 aa13.12□□□□□ -0.31
RFC4-206ENST00000427785 OGTO15294 1046 aa13.12□□□□□ -0.31
RFC4-206ENST00000427785 GYPCP04921 128 aa13.12□□□□□ -0.31
RFC4-206ENST00000427785 DLATP10515 647 aaKnown RBP13.12□□□□□ -0.31
RFC4-206ENST00000427785 THPOP40225 353 aa13.12□□□□□ -0.31
RFC4-206ENST00000427785 FMO5P49326 533 aa13.12□□□□□ -0.31
RFC4-206ENST00000427785 CRYBB1P53674 252 aaPredicted RBP13.12□□□□□ -0.31
RFC4-206ENST00000427785 OSTNP61366 133 aa13.12□□□□□ -0.31
RFC4-206ENST00000427785 CDC42EP1Q00587 391 aa13.12□□□□□ -0.31
RFC4-206ENST00000427785 PPP3CAQ08209 521 aa13.12□□□□□ -0.31
RFC4-206ENST00000427785 MGAT3Q09327 533 aa13.12□□□□□ -0.31
RFC4-206ENST00000427785 PTK7Q13308 1070 aa13.12□□□□□ -0.31
RFC4-206ENST00000427785 TRIM71Q2Q1W2 868 aaKnown RBP13.12□□□□□ -0.31
RFC4-206ENST00000427785 CBWD6Q4V339 395 aa13.12□□□□□ -0.31
RFC4-206ENST00000427785 CBWD3Q5JTY5 395 aa13.12□□□□□ -0.31
RFC4-206ENST00000427785 CBWD5Q5RIA9 395 aa13.12□□□□□ -0.31
RFC4-206ENST00000427785 FAM228AQ86W67 206 aa13.12□□□□□ -0.31
RFC4-206ENST00000427785 BRSK2Q8IWQ3 736 aa13.12□□□□□ -0.31
RFC4-206ENST00000427785 THNSL1Q8IYQ7 743 aa13.12□□□□□ -0.31
RFC4-206ENST00000427785 NME8Q8N427 588 aa13.12□□□□□ -0.31
RFC4-206ENST00000427785 CCDC150Q8NCX0 1101 aa13.12□□□□□ -0.31
RFC4-206ENST00000427785 ARMC5Q96C12 935 aa13.12□□□□□ -0.31
RFC4-206ENST00000427785 MFSD14AQ96MC6 490 aa13.12□□□□□ -0.31
RFC4-206ENST00000427785 ZNF830Q96NB3 372 aaPredicted RBP13.12□□□□□ -0.31
RFC4-206ENST00000427785 TRPV6Q9H1D0 765 aa13.12□□□□□ -0.31
RFC4-206ENST00000427785 KCNF1Q9H3M0 494 aa13.12□□□□□ -0.31
RFC4-206ENST00000427785 FAM207AQ9NSI2 230 aaPredicted RBP13.12□□□□□ -0.31
RFC4-206ENST00000427785 GCNT4Q9P109 453 aa13.12□□□□□ -0.31
RFC4-206ENST00000427785 PIN4Q9Y237 131 aaKnown RBP13.12□□□□□ -0.31
RFC4-206ENST00000427785 TET1Q8NFU7 2136 aa13.12□□□□□ -0.31
RFC4-206ENST00000427785 PTPRJQ12913 1337 aa13.12□□□□□ -0.31
RFC4-206ENST00000427785 ARVCFO00192 962 aa13.11□□□□□ -0.31
RFC4-206ENST00000427785 NPTXRO95502 500 aa13.11□□□□□ -0.31
RFC4-206ENST00000427785 CHRNA1P02708 482 aa13.11□□□□□ -0.31
RFC4-206ENST00000427785 MCF2P10911 925 aa13.11□□□□□ -0.31
RFC4-206ENST00000427785 EIF4BP23588 611 aaKnown RBP13.11□□□□□ -0.31
RFC4-206ENST00000427785 GCLMP48507 274 aa13.11□□□□□ -0.31
RFC4-206ENST00000427785 MXI1P50539 228 aa13.11□□□□□ -0.31
RFC4-206ENST00000427785 GSDMDP57764 484 aa13.11□□□□□ -0.31
RFC4-206ENST00000427785 APBA1Q02410 837 aa13.11□□□□□ -0.31
RFC4-206ENST00000427785 RBL2Q08999 1139 aa13.11□□□□□ -0.31
RFC4-206ENST00000427785 KCNMA1Q12791 1236 aa13.11□□□□□ -0.31
RFC4-206ENST00000427785 LRMPQ12912 555 aa13.11□□□□□ -0.31
RFC4-206ENST00000427785 TRIM14Q14142 442 aa13.11□□□□□ -0.31
RFC4-206ENST00000427785 PSMD6Q15008 389 aa13.11□□□□□ -0.31
RFC4-206ENST00000427785 PPFIBP1Q86W92 1011 aa13.11□□□□□ -0.31
RFC4-206ENST00000427785 TMEM192Q8IY95 271 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms