RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 C19orf67A6NJJ6 358 aa20.31■□□□□ 0.84
GPC1-205ENST00000427506 PI4K2BG5E9Z4 385 aa20.31■□□□□ 0.84
GPC1-205ENST00000427506 K7ERI5 159 aa20.31■□□□□ 0.84
GPC1-205ENST00000427506 DMP1Q13316 513 aaPredicted RBP20.31■□□□□ 0.84
GPC1-205ENST00000427506 RUSC1Q9BVN2 902 aa20.31■□□□□ 0.84
GPC1-205ENST00000427506 COLEC11Q9BWP8 271 aa20.31■□□□□ 0.84
GPC1-205ENST00000427506 VN1R3Q9BXE9 311 aa20.31■□□□□ 0.84
GPC1-205ENST00000427506 IRAK3Q9Y616 596 aa20.31■□□□□ 0.84
GPC1-205ENST00000427506 BDP1A6H8Y1 2624 aa20.31■□□□□ 0.84
GPC1-205ENST00000427506 BMP15O95972 392 aa20.3■□□□□ 0.84
GPC1-205ENST00000427506 ALADP13716 330 aa20.3■□□□□ 0.84
GPC1-205ENST00000427506 HOXB8P17481 243 aaPredicted RBP20.3■□□□□ 0.84
GPC1-205ENST00000427506 DSC1Q08554 894 aa20.3■□□□□ 0.84
GPC1-205ENST00000427506 GRIK3Q13003 919 aa20.3■□□□□ 0.84
GPC1-205ENST00000427506 TPRNQ4KMQ1 711 aa20.3■□□□□ 0.84
GPC1-205ENST00000427506 HYIQ5T013 277 aa20.3■□□□□ 0.84
GPC1-205ENST00000427506 CABP7Q86V35 215 aa20.3■□□□□ 0.84
GPC1-205ENST00000427506 KCTD17Q8N5Z5 321 aa20.3■□□□□ 0.84
GPC1-205ENST00000427506 AK8Q96MA6 479 aa20.3■□□□□ 0.84
GPC1-205ENST00000427506 PNMA5Q96PV4 448 aa20.3■□□□□ 0.84
GPC1-205ENST00000427506 EMILIN2Q9BXX0 1053 aa20.3■□□□□ 0.84
GPC1-205ENST00000427506 KMT5AQ9NQR1 393 aa20.3■□□□□ 0.84
GPC1-205ENST00000427506 SNTG2Q9NY99 539 aa20.3■□□□□ 0.84
GPC1-205ENST00000427506 EDN1P05305 212 aa20.29■□□□□ 0.84
GPC1-205ENST00000427506 NPTX2P47972 431 aa20.29■□□□□ 0.84
GPC1-205ENST00000427506 RAD51AP2Q09MP3 1159 aa20.29■□□□□ 0.84
GPC1-205ENST00000427506 PTPN14Q15678 1187 aa20.29■□□□□ 0.84
GPC1-205ENST00000427506 DCAF4L1Q3SXM0 396 aa20.29■□□□□ 0.84
GPC1-205ENST00000427506 ATF7IP2Q5U623 682 aa20.29■□□□□ 0.84
GPC1-205ENST00000427506 EEF1DP3Q658K8 133 aa20.29■□□□□ 0.84
GPC1-205ENST00000427506 SYCE2Q6PIF2 218 aa20.29■□□□□ 0.84
GPC1-205ENST00000427506 C1orf186Q6ZWK4 172 aa20.29■□□□□ 0.84
GPC1-205ENST00000427506 APBB1IPQ7Z5R6 666 aaPredicted RBP20.29■□□□□ 0.84
GPC1-205ENST00000427506 DAW1Q8N136 415 aa20.29■□□□□ 0.84
GPC1-205ENST00000427506 TIPINQ9BVW5 301 aa20.29■□□□□ 0.84
GPC1-205ENST00000427506 PHF7Q9BWX1 381 aaPredicted RBP20.29■□□□□ 0.84
GPC1-205ENST00000427506 S1PR5Q9H228 398 aa20.29■□□□□ 0.84
GPC1-205ENST00000427506 MRPL17Q9NRX2 175 aaKnown RBP20.29■□□□□ 0.84
GPC1-205ENST00000427506 MARCH5Q9NX47 278 aa20.29■□□□□ 0.84
GPC1-205ENST00000427506 NCOR1O75376 2440 aa20.28■□□□□ 0.84
GPC1-205ENST00000427506 SPDYE4A6NLX3 237 aa20.28■□□□□ 0.84
GPC1-205ENST00000427506 SFI1A8K8P3 1242 aa20.28■□□□□ 0.84
GPC1-205ENST00000427506 C2CD2LO14523 706 aa20.28■□□□□ 0.84
GPC1-205ENST00000427506 SOD2P04179 222 aa20.28■□□□□ 0.84
GPC1-205ENST00000427506 URODP06132 367 aa20.28■□□□□ 0.84
GPC1-205ENST00000427506 KLRC2P26717 231 aa20.28■□□□□ 0.84
GPC1-205ENST00000427506 UBA7P41226 1012 aa20.28■□□□□ 0.84
GPC1-205ENST00000427506 SF3A1Q15459 793 aaKnown RBP20.28■□□□□ 0.84
GPC1-205ENST00000427506 TMEM31Q5JXX7 168 aa20.28■□□□□ 0.84
GPC1-205ENST00000427506 NT5DC1Q5TFE4 455 aa20.28■□□□□ 0.84
GPC1-205ENST00000427506 CES5AQ6NT32 575 aa20.28■□□□□ 0.84
GPC1-205ENST00000427506 PPFIBP1Q86W92 1011 aa20.28■□□□□ 0.84
GPC1-205ENST00000427506 SYT2Q8N9I0 419 aaPredicted RBP20.28■□□□□ 0.84
GPC1-205ENST00000427506 GSTCDQ8NEC7 633 aa20.28■□□□□ 0.84
GPC1-205ENST00000427506 RASSF8Q8NHQ8 419 aa20.28■□□□□ 0.84
GPC1-205ENST00000427506 CALML4Q96GE6 196 aa20.28■□□□□ 0.84
GPC1-205ENST00000427506 RPGRIP1Q96KN7 1286 aa20.28■□□□□ 0.84
GPC1-205ENST00000427506 FOXD4L1Q9NU39 408 aa20.28■□□□□ 0.84
GPC1-205ENST00000427506 SSX2IPQ9Y2D8 614 aa20.28■□□□□ 0.84
GPC1-205ENST00000427506 GDAQ9Y2T3 454 aa20.28■□□□□ 0.84
GPC1-205ENST00000427506 RBM19Q9Y4C8 960 aaKnown RBP20.28■□□□□ 0.84
GPC1-205ENST00000427506 ZMYM2Q9UBW7 1377 aa20.28■□□□□ 0.84
GPC1-205ENST00000427506 PHLPP2Q6ZVD8 1323 aa20.27■□□□□ 0.84
GPC1-205ENST00000427506 MUC3AQ02505 3323 aa20.27■□□□□ 0.84
GPC1-205ENST00000427506 DCXO43602 365 aa20.27■□□□□ 0.84
GPC1-205ENST00000427506 RECQL4O94761 1208 aa20.27■□□□□ 0.84
GPC1-205ENST00000427506 PLA2G4BP0C869 781 aa20.27■□□□□ 0.84
GPC1-205ENST00000427506 EPCAMP16422 314 aa20.27■□□□□ 0.84
GPC1-205ENST00000427506 GUCY2CP25092 1073 aa20.27■□□□□ 0.84
GPC1-205ENST00000427506 CBX2Q14781 532 aaPredicted RBP20.27■□□□□ 0.84
GPC1-205ENST00000427506 KIAA1841Q6NSI8 718 aa20.27■□□□□ 0.84
GPC1-205ENST00000427506 TAS1R1Q7RTX1 841 aa20.27■□□□□ 0.84
GPC1-205ENST00000427506 SUSD6Q92537 303 aa20.27■□□□□ 0.84
GPC1-205ENST00000427506 RABGGTAQ92696 567 aa20.27■□□□□ 0.84
GPC1-205ENST00000427506 KLHL5Q96PQ7 755 aa20.27■□□□□ 0.84
GPC1-205ENST00000427506 HERC2P3Q9BVR0 1158 aa20.27■□□□□ 0.84
GPC1-205ENST00000427506 TMEM134Q9H6X4 195 aa20.27■□□□□ 0.84
GPC1-205ENST00000427506 C17orf75Q9HAS0 396 aa20.27■□□□□ 0.84
GPC1-205ENST00000427506 DZANK1Q9NVP4 752 aa20.27■□□□□ 0.84
GPC1-205ENST00000427506 FAM86C2PA6NEL3 165 aa20.26■□□□□ 0.83
GPC1-205ENST00000427506 F8W810 466 aa20.26■□□□□ 0.83
GPC1-205ENST00000427506 SLC16A4O15374 487 aa20.26■□□□□ 0.83
GPC1-205ENST00000427506 TADA2AO75478 443 aa20.26■□□□□ 0.83
GPC1-205ENST00000427506 THP07101 528 aa20.26■□□□□ 0.83
GPC1-205ENST00000427506 COL9A1P20849 921 aa20.26■□□□□ 0.83
GPC1-205ENST00000427506 LONP1P36776 959 aaKnown RBP20.26■□□□□ 0.83
GPC1-205ENST00000427506 GLUD2P49448 558 aa20.26■□□□□ 0.83
GPC1-205ENST00000427506 ITIH3Q06033 890 aa20.26■□□□□ 0.83
GPC1-205ENST00000427506 MAPK7Q13164 816 aa20.26■□□□□ 0.83
GPC1-205ENST00000427506 TMEM119Q4V9L6 283 aa20.26■□□□□ 0.83
GPC1-205ENST00000427506 RNF135Q8IUD6 432 aa20.26■□□□□ 0.83
GPC1-205ENST00000427506 INTS4Q96HW7 963 aaKnown RBP20.26■□□□□ 0.83
GPC1-205ENST00000427506 MRPL4Q9BYD3 311 aaKnown RBP20.26■□□□□ 0.83
GPC1-205ENST00000427506 DAXXQ9UER7 740 aaPredicted RBP20.26■□□□□ 0.83
GPC1-205ENST00000427506 KCNG1Q9UIX4 513 aa20.26■□□□□ 0.83
GPC1-205ENST00000427506 TNFSF13BQ9Y275 285 aa20.26■□□□□ 0.83
GPC1-205ENST00000427506 K7ELQ4 463 aaPredicted RBP20.25■□□□□ 0.83
GPC1-205ENST00000427506 SLC26A4O43511 780 aa20.25■□□□□ 0.83
GPC1-205ENST00000427506 CNPP09543 421 aaKnown RBP20.25■□□□□ 0.83
GPC1-205ENST00000427506 SYT1P21579 422 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms