RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 LRRC55Q6ZSA7 311 aa27.59■■■□□ 2.01
HERPUD2-205ENST00000427455 C11orf84Q9BUA3 381 aaPredicted RBP27.59■■■□□ 2.01
HERPUD2-205ENST00000427455 GOLPH3LQ9H4A5 285 aa27.59■■■□□ 2.01
HERPUD2-205ENST00000427455 CWH43Q9H720 699 aa27.59■■■□□ 2.01
HERPUD2-205ENST00000427455 MRPL44Q9H9J2 332 aaKnown RBP27.59■■■□□ 2.01
HERPUD2-205ENST00000427455 PTPRHQ9HD43 1115 aa27.59■■■□□ 2.01
HERPUD2-205ENST00000427455 AAASQ9NRG9 546 aa27.59■■■□□ 2.01
HERPUD2-205ENST00000427455 GIT1Q9Y2X7 761 aa27.59■■■□□ 2.01
HERPUD2-205ENST00000427455 RFXAPO00287 272 aa27.58■■■□□ 2.01
HERPUD2-205ENST00000427455 INPPL1O15357 1258 aa27.58■■■□□ 2.01
HERPUD2-205ENST00000427455 TOM1L1O75674 476 aa27.58■■■□□ 2.01
HERPUD2-205ENST00000427455 LAG3P18627 525 aa27.58■■■□□ 2.01
HERPUD2-205ENST00000427455 PROZP22891 400 aa27.58■■■□□ 2.01
HERPUD2-205ENST00000427455 MPZL3Q6UWV2 235 aa27.58■■■□□ 2.01
HERPUD2-205ENST00000427455 ZNF720Q7Z2F6 126 aa27.58■■■□□ 2.01
HERPUD2-205ENST00000427455 MAP4K3Q8IVH8 894 aa27.58■■■□□ 2.01
HERPUD2-205ENST00000427455 HVCN1Q96D96 273 aa27.58■■■□□ 2.01
HERPUD2-205ENST00000427455 BICD1Q96G01 975 aa27.58■■■□□ 2.01
HERPUD2-205ENST00000427455 CDT1Q9H211 546 aa27.58■■■□□ 2.01
HERPUD2-205ENST00000427455 TBC1D13Q9NVG8 400 aa27.58■■■□□ 2.01
HERPUD2-205ENST00000427455 H3BNC9 293 aa27.57■■■□□ 2
HERPUD2-205ENST00000427455 HNRNPDLO14979 420 aaKnown RBP27.57■■■□□ 2
HERPUD2-205ENST00000427455 MLH1P40692 756 aa27.57■■■□□ 2
HERPUD2-205ENST00000427455 AFMP43652 599 aa27.57■■■□□ 2
HERPUD2-205ENST00000427455 COASYQ13057 564 aa27.57■■■□□ 2
HERPUD2-205ENST00000427455 ADGRE1Q14246 886 aa27.57■■■□□ 2
HERPUD2-205ENST00000427455 P2RX5Q93086 422 aa27.57■■■□□ 2
HERPUD2-205ENST00000427455 STXBP5LQ9Y2K9 1186 aa27.57■■■□□ 2
HERPUD2-205ENST00000427455 PCDHB12Q9Y5F1 795 aa27.57■■■□□ 2
HERPUD2-205ENST00000427455 ARL5CA6NH57 179 aa27.56■■■□□ 2
HERPUD2-205ENST00000427455 ABLIM1O14639 778 aa27.56■■■□□ 2
HERPUD2-205ENST00000427455 LPXNO60711 386 aa27.56■■■□□ 2
HERPUD2-205ENST00000427455 PPP1R37O75864 691 aa27.56■■■□□ 2
HERPUD2-205ENST00000427455 PIGRP01833 764 aa27.56■■■□□ 2
HERPUD2-205ENST00000427455 MCF2P10911 925 aa27.56■■■□□ 2
HERPUD2-205ENST00000427455 AKAP5P24588 427 aa27.56■■■□□ 2
HERPUD2-205ENST00000427455 GPM6BQ13491 265 aa27.56■■■□□ 2
HERPUD2-205ENST00000427455 ALCAMQ13740 583 aa27.56■■■□□ 2
HERPUD2-205ENST00000427455 ZC2HC1CQ53FD0 456 aaPredicted RBP27.56■■■□□ 2
HERPUD2-205ENST00000427455 COLGALT1Q8NBJ5 622 aa27.56■■■□□ 2
HERPUD2-205ENST00000427455 IPO9Q96P70 1041 aaKnown RBP27.56■■■□□ 2
HERPUD2-205ENST00000427455 GAD1Q99259 594 aa27.56■■■□□ 2
HERPUD2-205ENST00000427455 TCHPQ9BT92 498 aa27.56■■■□□ 2
HERPUD2-205ENST00000427455 TBC1D7Q9P0N9 293 aa27.56■■■□□ 2
HERPUD2-205ENST00000427455 KANSL3Q9P2N6 904 aa27.56■■■□□ 2
HERPUD2-205ENST00000427455 ANKFY1Q9P2R3 1169 aa27.56■■■□□ 2
HERPUD2-205ENST00000427455 PARP2Q9UGN5 583 aa27.56■■■□□ 2
HERPUD2-205ENST00000427455 GCNT3O95395 438 aa27.55■■■□□ 2
HERPUD2-205ENST00000427455 LIG4P49917 911 aa27.55■■■□□ 2
HERPUD2-205ENST00000427455 RNASELQ05823 741 aaKnown RBP27.55■■■□□ 2
HERPUD2-205ENST00000427455 NOLC1Q14978 699 aaKnown RBP eCLIP27.55■■■□□ 2
HERPUD2-205ENST00000427455 UNC13DQ70J99 1090 aa27.55■■■□□ 2
HERPUD2-205ENST00000427455 GRAMD1CQ8IYS0 662 aa27.55■■■□□ 2
HERPUD2-205ENST00000427455 PAGE5Q96GU1 130 aa27.55■■■□□ 2
HERPUD2-205ENST00000427455 STRA6Q9BX79 667 aa27.55■■■□□ 2
HERPUD2-205ENST00000427455 BLZF1Q9H2G9 400 aa27.55■■■□□ 2
HERPUD2-205ENST00000427455 SNTG2Q9NY99 539 aa27.55■■■□□ 2
HERPUD2-205ENST00000427455 GTPBP6O43824 516 aaPredicted RBP27.54■■■□□ 2
HERPUD2-205ENST00000427455 RECQL4O94761 1208 aa27.54■■■□□ 2
HERPUD2-205ENST00000427455 AFF1P51825 1210 aaKnown RBP27.54■■■□□ 2
HERPUD2-205ENST00000427455 CUL4BQ13620 913 aa27.54■■■□□ 2
HERPUD2-205ENST00000427455 ZBTB33Q86T24 672 aa27.54■■■□□ 2
HERPUD2-205ENST00000427455 ZFP42Q96MM3 310 aa27.54■■■□□ 2
HERPUD2-205ENST00000427455 ZNF558Q96NG5 402 aa27.54■■■□□ 2
HERPUD2-205ENST00000427455 PCDHB13Q9Y5F0 798 aa27.54■■■□□ 2
HERPUD2-205ENST00000427455 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.53■■■□□ 2
HERPUD2-205ENST00000427455 CARNS1A5YM72 827 aa27.53■■■□□ 2
HERPUD2-205ENST00000427455 CLDN3O15551 220 aa27.53■■■□□ 2
HERPUD2-205ENST00000427455 MYL1P05976 194 aa27.53■■■□□ 2
HERPUD2-205ENST00000427455 POU3F3P20264 500 aaPredicted RBP27.53■■■□□ 2
HERPUD2-205ENST00000427455 IGFBP4P22692 258 aa27.53■■■□□ 2
HERPUD2-205ENST00000427455 CASP1P29466 404 aa27.53■■■□□ 2
HERPUD2-205ENST00000427455 GRM5P41594 1212 aa27.53■■■□□ 2
HERPUD2-205ENST00000427455 MCL1Q07820 350 aa27.53■■■□□ 2
HERPUD2-205ENST00000427455 KCNT2Q6UVM3 1135 aa27.53■■■□□ 2
HERPUD2-205ENST00000427455 ZBTB45Q96K62 511 aaPredicted RBP27.53■■■□□ 2
HERPUD2-205ENST00000427455 RPS6KC1Q96S38 1066 aa27.53■■■□□ 2
HERPUD2-205ENST00000427455 GDAQ9Y2T3 454 aa27.53■■■□□ 2
HERPUD2-205ENST00000427455 PVALEFA0A1B0GWK0 134 aa27.52■■■□□ 2
HERPUD2-205ENST00000427455 ZC3H11AO75152 810 aaKnown RBP eCLIP27.52■■■□□ 2
HERPUD2-205ENST00000427455 ZNF202O95125 648 aa27.52■■■□□ 2
HERPUD2-205ENST00000427455 POMCP01189 267 aa27.52■■■□□ 2
HERPUD2-205ENST00000427455 HARSP12081 509 aaKnown RBP27.52■■■□□ 2
HERPUD2-205ENST00000427455 PPM1AP35813 382 aa27.52■■■□□ 2
HERPUD2-205ENST00000427455 SCNN1GP51170 649 aa27.52■■■□□ 2
HERPUD2-205ENST00000427455 CASP5P51878 434 aa27.52■■■□□ 2
HERPUD2-205ENST00000427455 L1TD1Q5T7N2 865 aaKnown RBP27.52■■■□□ 2
HERPUD2-205ENST00000427455 KRBA2Q6ZNG9 492 aa27.52■■■□□ 2
HERPUD2-205ENST00000427455 CEP120Q8N960 986 aa27.52■■■□□ 2
HERPUD2-205ENST00000427455 KLHL23Q8NBE8 558 aa27.52■■■□□ 2
HERPUD2-205ENST00000427455 CCDC94Q9BW85 323 aaPredicted RBP27.52■■■□□ 2
HERPUD2-205ENST00000427455 LMCD1Q9NZU5 365 aa27.52■■■□□ 2
HERPUD2-205ENST00000427455 KLK14Q9P0G3 267 aa27.52■■■□□ 2
HERPUD2-205ENST00000427455 TDRD15B5MCY1 1934 aaKnown RBP27.51■■■□□ 2
HERPUD2-205ENST00000427455 MYBP10242 640 aa27.51■■□□□ 1.99
HERPUD2-205ENST00000427455 MATR3P43243 847 aaKnown RBP eCLIP27.51■■□□□ 1.99
HERPUD2-205ENST00000427455 PTPROQ16827 1216 aa27.51■■□□□ 1.99
HERPUD2-205ENST00000427455 FAM26FQ5R3K3 315 aa27.51■■□□□ 1.99
HERPUD2-205ENST00000427455 STXBP4Q6ZWJ1 553 aa27.51■■□□□ 1.99
HERPUD2-205ENST00000427455 THNSL1Q8IYQ7 743 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms