RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 BOCQ9BWV1 1114 aa3.34□□□□□ -1.88
PMS1-209ENST00000424059 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.34□□□□□ -1.88
PMS1-209ENST00000424059 IKZF4Q9H2S9 585 aa3.34□□□□□ -1.88
PMS1-209ENST00000424059 SLC52A2Q9HAB3 445 aa3.34□□□□□ -1.88
PMS1-209ENST00000424059 CHST12Q9NRB3 414 aa3.34□□□□□ -1.88
PMS1-209ENST00000424059 RABL2AQ9UBK7 228 aaPredicted RBP3.34□□□□□ -1.88
PMS1-209ENST00000424059 ASAP1Q9ULH1 1129 aa3.34□□□□□ -1.88
PMS1-209ENST00000424059 SUFUQ9UMX1 484 aa3.34□□□□□ -1.88
PMS1-209ENST00000424059 CCDC196A0A1B0GTZ2 297 aa3.33□□□□□ -1.88
PMS1-209ENST00000424059 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.33□□□□□ -1.88
PMS1-209ENST00000424059 GOLGA6L6A8MZA4 724 aa3.33□□□□□ -1.88
PMS1-209ENST00000424059 B4E1Z4 1266 aa3.33□□□□□ -1.88
PMS1-209ENST00000424059 CCDC159P0C7I6 412 aa3.33□□□□□ -1.88
PMS1-209ENST00000424059 HOXC13P31276 330 aa3.33□□□□□ -1.88
PMS1-209ENST00000424059 ZBED6P86452 979 aa3.33□□□□□ -1.88
PMS1-209ENST00000424059 ROM1Q03395 351 aa3.33□□□□□ -1.88
PMS1-209ENST00000424059 TRDNQ13061 729 aa3.33□□□□□ -1.88
PMS1-209ENST00000424059 SAFB2Q14151 953 aaKnown RBP eCLIP3.33□□□□□ -1.88
PMS1-209ENST00000424059 SEPT2Q15019 361 aa3.33□□□□□ -1.88
PMS1-209ENST00000424059 FNDC7Q5VTL7 733 aa3.33□□□□□ -1.88
PMS1-209ENST00000424059 IGFL4Q6B9Z1 124 aa3.33□□□□□ -1.88
PMS1-209ENST00000424059 ULK2Q8IYT8 1036 aa3.33□□□□□ -1.88
PMS1-209ENST00000424059 VMP1Q96GC9 406 aa3.33□□□□□ -1.88
PMS1-209ENST00000424059 C8orf48Q96LL4 319 aa3.33□□□□□ -1.88
PMS1-209ENST00000424059 TANGO6Q9C0B7 1094 aa3.33□□□□□ -1.88
PMS1-209ENST00000424059 DHX36Q9H2U1 1008 aaKnown RBP3.33□□□□□ -1.88
PMS1-209ENST00000424059 IFT57Q9NWB7 429 aa3.33□□□□□ -1.88
PMS1-209ENST00000424059 COMMD8Q9NX08 183 aa3.33□□□□□ -1.88
PMS1-209ENST00000424059 DCAF16Q9NXF7 216 aa3.33□□□□□ -1.88
PMS1-209ENST00000424059 CLIC5Q9NZA1 410 aa3.33□□□□□ -1.88
PMS1-209ENST00000424059 TMOD4Q9NZQ9 345 aa3.33□□□□□ -1.88
PMS1-209ENST00000424059 FAM184BQ9ULE4 1060 aa3.33□□□□□ -1.88
PMS1-209ENST00000424059 ITM2BQ9Y287 266 aa3.33□□□□□ -1.88
PMS1-209ENST00000424059 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.33□□□□□ -1.88
PMS1-209ENST00000424059 A0A1W2PRX2 142 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 SHTN1A0MZ66 631 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 TMEM191CA6NGB0 347 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 PRSS47A8MTI9 375 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 CAND2O75155 1236 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 RAPGEF3O95398 923 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 HSP90AB1P08238 724 aaKnown RBP3.32□□□□□ -1.88
PMS1-209ENST00000424059 PIK3CAP42336 1068 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 ADCY7P51828 1080 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 RBM6P78332 1123 aaKnown RBP3.32□□□□□ -1.88
PMS1-209ENST00000424059 CRHR2Q13324 411 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 NFE2L2Q16236 605 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 DDB1Q16531 1140 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 DGKDQ16760 1214 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 CATSPEREQ5SY80 951 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 ARMC3Q5W041 872 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 ZCCHC8Q6NZY4 707 aaKnown RBP3.32□□□□□ -1.88
PMS1-209ENST00000424059 RTN4RL1Q86UN2 441 aaPredicted RBP3.32□□□□□ -1.88
PMS1-209ENST00000424059 TRIM74Q86UV6 250 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 TRIM73Q86UV7 250 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 ZNF575Q86XF7 245 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 NME9Q86XW9 330 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 SUGP1Q8IWZ8 645 aaKnown RBP3.32□□□□□ -1.88
PMS1-209ENST00000424059 CHPFQ8IZ52 775 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 SAMD14Q8IZD0 417 aaPredicted RBP3.32□□□□□ -1.88
PMS1-209ENST00000424059 C2orf69Q8N8R5 385 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 FAM184AQ8NB25 1140 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 TBC1D22AQ8WUA7 517 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 FRAT1Q92837 279 aaPredicted RBP3.32□□□□□ -1.88
PMS1-209ENST00000424059 MPP4Q96JB8 637 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 DEPDC7Q96QD5 511 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 MAP3K14Q99558 947 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 IQCGQ9H095 443 aaKnown RBP3.32□□□□□ -1.88
PMS1-209ENST00000424059 MMRN2Q9H8L6 949 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 AGO3Q9H9G7 860 aaKnown RBP3.32□□□□□ -1.88
PMS1-209ENST00000424059 AS3MTQ9HBK9 375 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 ACSS2Q9NR19 701 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 USP25Q9UHP3 1055 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 RASSF10A6NK89 507 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 H0YHG0 523 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 RPN1P04843 607 aaKnown RBP3.32□□□□□ -1.88
PMS1-209ENST00000424059 SRGNP10124 158 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 MAN2A2P49641 1150 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 STAT5BP51692 787 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 ZNF131P52739 623 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 SARNPP82979 210 aaKnown RBP3.32□□□□□ -1.88
PMS1-209ENST00000424059 IRF9Q00978 393 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 MECOMQ03112 1051 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 TMEM177Q53S58 311 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 ANKRD45Q5TZF3 282 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 JAKMIP3Q5VZ66 844 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 MFSD5Q6N075 450 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 CCBE1Q6UXH8 406 aaPredicted RBP3.32□□□□□ -1.88
PMS1-209ENST00000424059 BCL6BQ8N143 479 aaPredicted RBP3.32□□□□□ -1.88
PMS1-209ENST00000424059 APPL2Q8NEU8 664 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 OR5AN1Q8NGI8 311 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 PPM1EQ8WY54 764 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 TNPO1Q92973 898 aaKnown RBP3.32□□□□□ -1.88
PMS1-209ENST00000424059 SYAP1Q96A49 352 aaPredicted RBP3.32□□□□□ -1.88
PMS1-209ENST00000424059 FOXRED1Q96CU9 486 aaPredicted RBP3.32□□□□□ -1.88
PMS1-209ENST00000424059 MPHOSPH6Q99547 160 aaKnown RBP3.32□□□□□ -1.88
PMS1-209ENST00000424059 KMT5AQ9NQR1 393 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 POLG2Q9UHN1 485 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 BLOC1S6Q9UL45 172 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 N6AMT1Q9Y5N5 214 aa3.32□□□□□ -1.88
PMS1-209ENST00000424059 IKBKGQ9Y6K9 419 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms