RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 TOPORSQ9NS56 1045 aaPredicted RBP9.53□□□□□ -0.88
MDC1-204ENST00000422266 LARSQ9P2J5 1176 aaKnown RBP9.53□□□□□ -0.88
MDC1-204ENST00000422266 PARP2Q9UGN5 583 aa9.53□□□□□ -0.88
MDC1-204ENST00000422266 BARX2Q9UMQ3 279 aaPredicted RBP9.53□□□□□ -0.88
MDC1-204ENST00000422266 ARIH1Q9Y4X5 557 aaPredicted RBP9.53□□□□□ -0.88
MDC1-204ENST00000422266 HCFC2Q9Y5Z7 792 aa9.53□□□□□ -0.88
MDC1-204ENST00000422266 PLXNA4Q9HCM2 1894 aa9.53□□□□□ -0.88
MDC1-204ENST00000422266 VWA3AA6NCI4 1184 aa9.52□□□□□ -0.89
MDC1-204ENST00000422266 CCDC169A6NNP5 214 aa9.52□□□□□ -0.89
MDC1-204ENST00000422266 MEIS3P2A8K0S8 358 aa9.52□□□□□ -0.89
MDC1-204ENST00000422266 HIDE1A8MVS5 230 aa9.52□□□□□ -0.89
MDC1-204ENST00000422266 DDHD2O94830 711 aa9.52□□□□□ -0.89
MDC1-204ENST00000422266 THP07101 528 aa9.52□□□□□ -0.89
MDC1-204ENST00000422266 ADH1AP07327 375 aa9.52□□□□□ -0.89
MDC1-204ENST00000422266 GUCY2CP25092 1073 aa9.52□□□□□ -0.89
MDC1-204ENST00000422266 KLRC2P26717 231 aa9.52□□□□□ -0.89
MDC1-204ENST00000422266 YARSP54577 528 aaKnown RBP9.52□□□□□ -0.89
MDC1-204ENST00000422266 DSC1Q08554 894 aa9.52□□□□□ -0.89
MDC1-204ENST00000422266 STRN3Q13033 797 aa9.52□□□□□ -0.89
MDC1-204ENST00000422266 NBR1Q14596 966 aa9.52□□□□□ -0.89
MDC1-204ENST00000422266 ATF7IP2Q5U623 682 aa9.52□□□□□ -0.89
MDC1-204ENST00000422266 CABP7Q86V35 215 aa9.52□□□□□ -0.89
MDC1-204ENST00000422266 ZNF280BQ86YH2 543 aa9.52□□□□□ -0.89
MDC1-204ENST00000422266 COLGALT2Q8IYK4 626 aa9.52□□□□□ -0.89
MDC1-204ENST00000422266 SYT2Q8N9I0 419 aaPredicted RBP9.52□□□□□ -0.89
MDC1-204ENST00000422266 RASSF8Q8NHQ8 419 aa9.52□□□□□ -0.89
MDC1-204ENST00000422266 SUSD6Q92537 303 aa9.52□□□□□ -0.89
MDC1-204ENST00000422266 NTPCRQ9BSD7 190 aaKnown RBP9.52□□□□□ -0.89
MDC1-204ENST00000422266 APOL6Q9BWW8 343 aa9.52□□□□□ -0.89
MDC1-204ENST00000422266 MRPL4Q9BYD3 311 aaKnown RBP9.52□□□□□ -0.89
MDC1-204ENST00000422266 ADAM7Q9H2U9 754 aa9.52□□□□□ -0.89
MDC1-204ENST00000422266 NXF3Q9H4D5 531 aaKnown RBP9.52□□□□□ -0.89
MDC1-204ENST00000422266 KMT5AQ9NQR1 393 aa9.52□□□□□ -0.89
MDC1-204ENST00000422266 DNAJB4Q9UDY4 337 aa9.52□□□□□ -0.89
MDC1-204ENST00000422266 HCN4Q9Y3Q4 1203 aa9.52□□□□□ -0.89
MDC1-204ENST00000422266 USP15Q9Y4E8 981 aaPredicted RBP9.52□□□□□ -0.89
MDC1-204ENST00000422266 REV3LO60673 3130 aa9.52□□□□□ -0.89
MDC1-204ENST00000422266 A0A087WWV3 80 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 PRR33A8MZF0 331 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 RBAK-RBAKDNI3L0D1 243 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 B4GALT5O43286 388 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 TRAPPC3O43617 180 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 CLASP2O75122 1294 aaKnown RBP9.51□□□□□ -0.89
MDC1-204ENST00000422266 HIP1RO75146 1068 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 TADA2AO75478 443 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 TXLNAP40222 546 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 NPTX2P47972 431 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 GLUD2P49448 558 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 SCNN1GP51170 649 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 PEX3P56589 373 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 TUSC3Q13454 348 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 PTPN14Q15678 1187 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 ZRSR1Q15695 479 aaKnown RBP9.51□□□□□ -0.89
MDC1-204ENST00000422266 KYAT1Q16773 422 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 USP41Q3LFD5 358 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 HERC4Q5GLZ8 1057 aaPredicted RBP9.51□□□□□ -0.89
MDC1-204ENST00000422266 ATAT1Q5SQI0 421 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 RINT1Q6NUQ1 792 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 LLGL2Q6P1M3 1020 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 C1orf186Q6ZWK4 172 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 PLCD3Q8N3E9 789 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 HDAC7Q8WUI4 952 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 SPIRE2Q8WWL2 714 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 UROC1Q96N76 676 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 HERC2P3Q9BVR0 1158 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 CCDC94Q9BW85 323 aaPredicted RBP9.51□□□□□ -0.89
MDC1-204ENST00000422266 BACH2Q9BYV9 841 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 CCDC113Q9H0I3 377 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 S1PR5Q9H228 398 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 ZSCAN16Q9H4T2 348 aaPredicted RBP9.51□□□□□ -0.89
MDC1-204ENST00000422266 PDZD7Q9H5P4 517 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 SFXN1Q9H9B4 322 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 SLC38A7Q9NVC3 462 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 ARHGAP28Q9P2N2 729 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 ADAM28Q9UKQ2 775 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 ODF2LQ9ULJ1 636 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 TNFSF13BQ9Y275 285 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 HES2Q9Y543 173 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 PCDHGC5Q9Y5F6 944 aa9.51□□□□□ -0.89
MDC1-204ENST00000422266 SF3B1O75533 1304 aaKnown RBP eCLIP9.51□□□□□ -0.89
MDC1-204ENST00000422266 VPS37CA5D8V6 355 aaPredicted RBP9.5□□□□□ -0.89
MDC1-204ENST00000422266 LOC730098B7Z3J9 87 aa9.5□□□□□ -0.89
MDC1-204ENST00000422266 E9PMD0 336 aa9.5□□□□□ -0.89
MDC1-204ENST00000422266 K7ELQ4 463 aaPredicted RBP9.5□□□□□ -0.89
MDC1-204ENST00000422266 CD2BP2O95400 341 aaKnown RBP9.5□□□□□ -0.89
MDC1-204ENST00000422266 SSBP05455 408 aaKnown RBP eCLIP9.5□□□□□ -0.89
MDC1-204ENST00000422266 PLS3P13797 630 aa9.5□□□□□ -0.89
MDC1-204ENST00000422266 LIG1P18858 919 aa9.5□□□□□ -0.89
MDC1-204ENST00000422266 AKAP5P24588 427 aa9.5□□□□□ -0.89
MDC1-204ENST00000422266 DSG1Q02413 1049 aa9.5□□□□□ -0.89
MDC1-204ENST00000422266 HSP90AA2PQ14568 343 aaPredicted RBP9.5□□□□□ -0.89
MDC1-204ENST00000422266 ECM1Q16610 540 aa9.5□□□□□ -0.89
MDC1-204ENST00000422266 SYCE2Q6PIF2 218 aa9.5□□□□□ -0.89
MDC1-204ENST00000422266 C15orf39Q6ZRI6 1047 aa9.5□□□□□ -0.89
MDC1-204ENST00000422266 KCNN1Q92952 543 aa9.5□□□□□ -0.89
MDC1-204ENST00000422266 ZFP42Q96MM3 310 aa9.5□□□□□ -0.89
MDC1-204ENST00000422266 TCHPQ9BT92 498 aa9.5□□□□□ -0.89
MDC1-204ENST00000422266 RHOBTB2Q9BYZ6 727 aa9.5□□□□□ -0.89
MDC1-204ENST00000422266 RNF39Q9H2S5 420 aa9.5□□□□□ -0.89
MDC1-204ENST00000422266 PLEKHA4Q9H4M7 779 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms