RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 UNC13DQ70J99 1090 aa20.47■□□□□ 0.87
PTCD3-204ENST00000418628 RNF169Q8NCN4 708 aa20.47■□□□□ 0.87
PTCD3-204ENST00000418628 GSTCDQ8NEC7 633 aa20.47■□□□□ 0.87
PTCD3-204ENST00000418628 ENGASEQ8NFI3 743 aa20.47■□□□□ 0.87
PTCD3-204ENST00000418628 P2RX5Q93086 422 aa20.47■□□□□ 0.87
PTCD3-204ENST00000418628 PAGE5Q96GU1 130 aa20.47■□□□□ 0.87
PTCD3-204ENST00000418628 ADPGKQ9BRR6 497 aa20.47■□□□□ 0.87
PTCD3-204ENST00000418628 PLVAPQ9BX97 442 aa20.47■□□□□ 0.87
PTCD3-204ENST00000418628 CERS4Q9HA82 394 aa20.47■□□□□ 0.87
PTCD3-204ENST00000418628 UBN1Q9NPG3 1134 aa20.47■□□□□ 0.87
PTCD3-204ENST00000418628 PANK4Q9NVE7 773 aa20.47■□□□□ 0.87
PTCD3-204ENST00000418628 TBC1D13Q9NVG8 400 aa20.47■□□□□ 0.87
PTCD3-204ENST00000418628 GIT1Q9Y2X7 761 aa20.47■□□□□ 0.87
PTCD3-204ENST00000418628 KLRC4O43908 158 aa20.46■□□□□ 0.87
PTCD3-204ENST00000418628 B4GALT3O60512 393 aa20.46■□□□□ 0.87
PTCD3-204ENST00000418628 TOM1L1O75674 476 aa20.46■□□□□ 0.87
PTCD3-204ENST00000418628 RB1P06400 928 aa20.46■□□□□ 0.87
PTCD3-204ENST00000418628 ITGA4P13612 1032 aa20.46■□□□□ 0.87
PTCD3-204ENST00000418628 CASP1P29466 404 aa20.46■□□□□ 0.87
PTCD3-204ENST00000418628 AFF1P51825 1210 aaKnown RBP20.46■□□□□ 0.87
PTCD3-204ENST00000418628 CASP5P51878 434 aa20.46■□□□□ 0.87
PTCD3-204ENST00000418628 STRN3Q13033 797 aa20.46■□□□□ 0.87
PTCD3-204ENST00000418628 CUL4BQ13620 913 aa20.46■□□□□ 0.87
PTCD3-204ENST00000418628 NOMO2Q5JPE7 1267 aa20.46■□□□□ 0.87
PTCD3-204ENST00000418628 CLEC17AQ6ZS10 378 aa20.46■□□□□ 0.87
PTCD3-204ENST00000418628 CCDC65Q8IXS2 484 aa20.46■□□□□ 0.87
PTCD3-204ENST00000418628 GRAMD1CQ8IYS0 662 aa20.46■□□□□ 0.87
PTCD3-204ENST00000418628 CEP57L1Q8IYX8 460 aa20.46■□□□□ 0.87
PTCD3-204ENST00000418628 ABI1Q8IZP0 508 aa20.46■□□□□ 0.87
PTCD3-204ENST00000418628 FMR1NBQ8N0W7 255 aaPredicted RBP20.46■□□□□ 0.87
PTCD3-204ENST00000418628 ARNTL2Q8WYA1 636 aa20.46■□□□□ 0.87
PTCD3-204ENST00000418628 TRIM6Q9C030 488 aaPredicted RBP20.46■□□□□ 0.87
PTCD3-204ENST00000418628 HAPLN2Q9GZV7 340 aa20.46■□□□□ 0.87
PTCD3-204ENST00000418628 ZHX3Q9H4I2 956 aa20.46■□□□□ 0.87
PTCD3-204ENST00000418628 TYW1Q9NV66 732 aaKnown RBP20.46■□□□□ 0.87
PTCD3-204ENST00000418628 H3BNC9 293 aa20.45■□□□□ 0.86
PTCD3-204ENST00000418628 FAM189A1O60320 539 aa20.45■□□□□ 0.86
PTCD3-204ENST00000418628 MYL1P05976 194 aa20.45■□□□□ 0.86
PTCD3-204ENST00000418628 MCF2P10911 925 aa20.45■□□□□ 0.86
PTCD3-204ENST00000418628 IDEP14735 1019 aa20.45■□□□□ 0.86
PTCD3-204ENST00000418628 ASIC1P78348 528 aa20.45■□□□□ 0.86
PTCD3-204ENST00000418628 MCL1Q07820 350 aa20.45■□□□□ 0.86
PTCD3-204ENST00000418628 SNW1Q13573 536 aaKnown RBP20.45■□□□□ 0.86
PTCD3-204ENST00000418628 ALCAMQ13740 583 aa20.45■□□□□ 0.86
PTCD3-204ENST00000418628 ZNF568Q3ZCX4 644 aa20.45■□□□□ 0.86
PTCD3-204ENST00000418628 ZC2HC1CQ53FD0 456 aaPredicted RBP20.45■□□□□ 0.86
PTCD3-204ENST00000418628 KRBA2Q6ZNG9 492 aa20.45■□□□□ 0.86
PTCD3-204ENST00000418628 COLGALT1Q8NBJ5 622 aa20.45■□□□□ 0.86
PTCD3-204ENST00000418628 FBXO22Q8NEZ5 403 aa20.45■□□□□ 0.86
PTCD3-204ENST00000418628 GDPD5Q8WTR4 605 aa20.45■□□□□ 0.86
PTCD3-204ENST00000418628 MYLIPQ8WY64 445 aa20.45■□□□□ 0.86
PTCD3-204ENST00000418628 MTUS1Q9ULD2 1270 aa20.45■□□□□ 0.86
PTCD3-204ENST00000418628 PVALEFA0A1B0GWK0 134 aa20.44■□□□□ 0.86
PTCD3-204ENST00000418628 ARL5CA6NH57 179 aa20.44■□□□□ 0.86
PTCD3-204ENST00000418628 RECQL4O94761 1208 aa20.44■□□□□ 0.86
PTCD3-204ENST00000418628 ZNF202O95125 648 aa20.44■□□□□ 0.86
PTCD3-204ENST00000418628 LAG3P18627 525 aa20.44■□□□□ 0.86
PTCD3-204ENST00000418628 CTNNB1P35222 781 aa20.44■□□□□ 0.86
PTCD3-204ENST00000418628 MLH1P40692 756 aa20.44■□□□□ 0.86
PTCD3-204ENST00000418628 GRM5P41594 1212 aa20.44■□□□□ 0.86
PTCD3-204ENST00000418628 AFMP43652 599 aa20.44■□□□□ 0.86
PTCD3-204ENST00000418628 DSC1Q08554 894 aa20.44■□□□□ 0.86
PTCD3-204ENST00000418628 NOLC1Q14978 699 aaKnown RBP eCLIP20.44■□□□□ 0.86
PTCD3-204ENST00000418628 HERC4Q5GLZ8 1057 aaPredicted RBP20.44■□□□□ 0.86
PTCD3-204ENST00000418628 L1TD1Q5T7N2 865 aaKnown RBP20.44■□□□□ 0.86
PTCD3-204ENST00000418628 EPM2AIP1Q7L775 607 aaPredicted RBP20.44■□□□□ 0.86
PTCD3-204ENST00000418628 HACE1Q8IYU2 909 aa20.44■□□□□ 0.86
PTCD3-204ENST00000418628 CEP120Q8N960 986 aa20.44■□□□□ 0.86
PTCD3-204ENST00000418628 ZBTB45Q96K62 511 aaPredicted RBP20.44■□□□□ 0.86
PTCD3-204ENST00000418628 ZFP42Q96MM3 310 aa20.44■□□□□ 0.86
PTCD3-204ENST00000418628 GAD1Q99259 594 aa20.44■□□□□ 0.86
PTCD3-204ENST00000418628 BLZF1Q9H2G9 400 aa20.44■□□□□ 0.86
PTCD3-204ENST00000418628 MRPL44Q9H9J2 332 aaKnown RBP20.44■□□□□ 0.86
PTCD3-204ENST00000418628 STYXL1Q9Y6J8 313 aa20.44■□□□□ 0.86
PTCD3-204ENST00000418628 MTCL1Q9Y4B5 1905 aaKnown RBP20.44■□□□□ 0.86
PTCD3-204ENST00000418628 SCN1AP35498 2009 aa20.44■□□□□ 0.86
PTCD3-204ENST00000418628 TSC2P49815 1807 aa20.43■□□□□ 0.86
PTCD3-204ENST00000418628 RFXAPO00287 272 aa20.43■□□□□ 0.86
PTCD3-204ENST00000418628 HNRNPDLO14979 420 aaKnown RBP20.43■□□□□ 0.86
PTCD3-204ENST00000418628 MEFVO15553 781 aaPredicted RBP20.43■□□□□ 0.86
PTCD3-204ENST00000418628 GTPBP6O43824 516 aaPredicted RBP20.43■□□□□ 0.86
PTCD3-204ENST00000418628 MYBP10242 640 aa20.43■□□□□ 0.86
PTCD3-204ENST00000418628 AKAP5P24588 427 aa20.43■□□□□ 0.86
PTCD3-204ENST00000418628 FAM160A1Q05DH4 1040 aa20.43■□□□□ 0.86
PTCD3-204ENST00000418628 KCNA1Q09470 495 aa20.43■□□□□ 0.86
PTCD3-204ENST00000418628 APBB1IPQ7Z5R6 666 aaPredicted RBP20.43■□□□□ 0.86
PTCD3-204ENST00000418628 GLIS3Q8NEA6 775 aa20.43■□□□□ 0.86
PTCD3-204ENST00000418628 C11orf84Q9BUA3 381 aaPredicted RBP20.43■□□□□ 0.86
PTCD3-204ENST00000418628 NRDE2Q9H7Z3 1164 aa20.43■□□□□ 0.86
PTCD3-204ENST00000418628 MIOSQ9NXC5 875 aa20.43■□□□□ 0.86
PTCD3-204ENST00000418628 SNTG2Q9NY99 539 aa20.43■□□□□ 0.86
PTCD3-204ENST00000418628 STXBP5LQ9Y2K9 1186 aa20.43■□□□□ 0.86
PTCD3-204ENST00000418628 PRUNE2Q8WUY3 3088 aa20.42■□□□□ 0.86
PTCD3-204ENST00000418628 PTGESO14684 152 aa20.42■□□□□ 0.86
PTCD3-204ENST00000418628 EIF3DO15371 548 aaKnown RBP eCLIP20.42■□□□□ 0.86
PTCD3-204ENST00000418628 PRR29P0C7W0 189 aa20.42■□□□□ 0.86
PTCD3-204ENST00000418628 NAB2Q15742 525 aa20.42■□□□□ 0.86
PTCD3-204ENST00000418628 CSPP1Q1MSJ5 1256 aa20.42■□□□□ 0.86
PTCD3-204ENST00000418628 TMEM132AQ24JP5 1023 aa20.42■□□□□ 0.86
PTCD3-204ENST00000418628 XKR4Q5GH76 650 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms