RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 STKLD1Q8NE28 680 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 PARK7Q99497 189 aaKnown RBP11.88□□□□□ -0.51
PTCH1-205ENST00000418258 PRKCQQ04759 706 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 CYB5R4Q7L1T6 521 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 SP8Q8IXZ3 490 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 GRIN3BO60391 1043 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 TLR2O60603 784 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 DCTN3O75935 186 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 SULT1E1P49888 294 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 NUGGCQ68CJ6 796 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 ZNF746Q6NUN9 644 aaPredicted RBP11.88□□□□□ -0.51
PTCH1-205ENST00000418258 TDRD7Q8NHU6 1098 aaKnown RBP11.88□□□□□ -0.51
PTCH1-205ENST00000418258 ZNF507Q8TCN5 953 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 ZNF512Q96ME7 567 aaPredicted RBP11.88□□□□□ -0.51
PTCH1-205ENST00000418258 OSBPL3Q9H4L5 887 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 GPBP1L1Q9HC44 474 aaPredicted RBP11.88□□□□□ -0.51
PTCH1-205ENST00000418258 PCDHA10Q9Y5I2 948 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 ZNF197O14709 1029 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 FDX1P10109 184 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 STAT5BP51692 787 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 RNF168Q8IYW5 571 aaPredicted RBP11.88□□□□□ -0.51
PTCH1-205ENST00000418258 BARHL2Q9NY43 387 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 ADA2Q9NZK5 511 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 TRIM49BA6NDI0 452 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 MCF2P10911 925 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 NR1D1P20393 614 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 CHRNA3P32297 505 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 BCAR1P56945 870 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 COG2Q14746 738 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 RCOR1Q9UKL0 485 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 TET3O43151 1660 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 FTLP02792 175 aaPredicted RBP11.88□□□□□ -0.51
PTCH1-205ENST00000418258 PRCPP42785 496 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 CDH6P55285 790 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 CCDC157Q569K6 752 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 PPM1NQ8N819 430 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 ZNF513Q8N8E2 541 aaPredicted RBP11.88□□□□□ -0.51
PTCH1-205ENST00000418258 EML4Q9HC35 981 aaKnown RBP11.88□□□□□ -0.51
PTCH1-205ENST00000418258 DCP1AQ9NPI6 582 aaPredicted RBP11.88□□□□□ -0.51
PTCH1-205ENST00000418258 DDX56Q9NY93 547 aaKnown RBP11.88□□□□□ -0.51
PTCH1-205ENST00000418258 QRICH1Q2TAL8 776 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 SYT2Q8N9I0 419 aaPredicted RBP11.88□□□□□ -0.51
PTCH1-205ENST00000418258 NCAPD2Q15021 1401 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 SPDYE5A6NIY4 337 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 GYG2O15488 501 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 ATP9BO43861 1147 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 PFDN1O60925 122 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 ALDH1A3P47895 512 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 MRPS25P82663 173 aaKnown RBP11.87□□□□□ -0.51
PTCH1-205ENST00000418258 SREBF2Q12772 1141 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 SPDYE7PQ495Y7 208 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 TRIM72Q6ZMU5 477 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 VSTM4Q8IW00 320 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 UNC45AQ9H3U1 944 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 PYCARDQ9ULZ3 195 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 CDC42EP1Q00587 391 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 MDM2Q00987 491 aaPredicted RBP11.87□□□□□ -0.51
PTCH1-205ENST00000418258 DEUP1Q05D60 604 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 IL31Q6EBC2 164 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 PKN3Q6P5Z2 889 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 ZNF280CQ8ND82 737 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 PYGBP11216 843 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 DRAP1Q14919 205 aaPredicted RBP11.87□□□□□ -0.51
PTCH1-205ENST00000418258 ASAP3Q8TDY4 903 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 ZNRF3Q9ULT6 936 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 PPP3CCP48454 512 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 KLHL38Q2WGJ6 581 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 KRT87PA6NCN2 255 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 C2CD2LO14523 706 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 ARHGEF7Q14155 803 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 TXNRD1Q16881 649 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 AARS2Q5JTZ9 985 aaKnown RBP11.87□□□□□ -0.51
PTCH1-205ENST00000418258 LDHDQ86WU2 507 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 TBC1D10CQ8IV04 446 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 PPHLN1Q8NEY8 458 aaKnown RBP11.87□□□□□ -0.51
PTCH1-205ENST00000418258 PLEKHA5Q9HAU0 1116 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 GJB4Q9NTQ9 266 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 ASAP2O43150 1006 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 CYP2B6P20813 491 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 CASP1P29466 404 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 OR1G1P47890 313 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 EFNA5P52803 228 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 CAV1Q03135 178 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 TAP1Q03518 808 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 GRM4Q14833 912 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 E2F5Q15329 346 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 TMED8Q6PL24 325 aaPredicted RBP11.87□□□□□ -0.51
PTCH1-205ENST00000418258 ZC3H18Q86VM9 953 aaKnown RBP11.87□□□□□ -0.51
PTCH1-205ENST00000418258 DACH2Q96NX9 599 aa11.87□□□□□ -0.51
PTCH1-205ENST00000418258 RSPH10B2B2RC85 870 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 DYNC1LI2O43237 492 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-205ENST00000418258 RSPH10BP0C881 870 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 MYBL1P10243 752 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 PPP1R36Q96LQ0 422 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 H7C1W4 665 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 GFAPP14136 432 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 DAB2P98082 770 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 TMEM132DQ14C87 1099 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 RUBCNLQ9H714 662 aa11.86□□□□□ -0.51
PTCH1-205ENST00000418258 LY9Q9HBG7 655 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms