RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 PAAF1Q9BRP4 392 aa14.38□□□□□ -0.11
LINC00339-202ENST00000416769 RPP25Q9BUL9 199 aaKnown RBP14.38□□□□□ -0.11
LINC00339-202ENST00000416769 WDR6Q9NNW5 1121 aaKnown RBP14.38□□□□□ -0.11
LINC00339-202ENST00000416769 SH2B1Q9NRF2 756 aaPredicted RBP14.38□□□□□ -0.11
LINC00339-202ENST00000416769 KLK14Q9P0G3 267 aa14.38□□□□□ -0.11
LINC00339-202ENST00000416769 MTCL1Q9Y4B5 1905 aaKnown RBP14.38□□□□□ -0.11
LINC00339-202ENST00000416769 ZNF292O60281 2723 aa14.38□□□□□ -0.11
LINC00339-202ENST00000416769 PFKFB2O60825 505 aa14.37□□□□□ -0.11
LINC00339-202ENST00000416769 DCNP07585 359 aaKnown RBP14.37□□□□□ -0.11
LINC00339-202ENST00000416769 ITGA4P13612 1032 aa14.37□□□□□ -0.11
LINC00339-202ENST00000416769 AMHR2Q16671 573 aa14.37□□□□□ -0.11
LINC00339-202ENST00000416769 XKR9Q5GH70 373 aa14.37□□□□□ -0.11
LINC00339-202ENST00000416769 SPECC1Q5M775 1068 aa14.37□□□□□ -0.11
LINC00339-202ENST00000416769 C15orf39Q6ZRI6 1047 aa14.37□□□□□ -0.11
LINC00339-202ENST00000416769 PIK3AP1Q6ZUJ8 805 aa14.37□□□□□ -0.11
LINC00339-202ENST00000416769 GET4Q7L5D6 327 aaPredicted RBP14.37□□□□□ -0.11
LINC00339-202ENST00000416769 SLC44A3Q8N4M1 653 aa14.37□□□□□ -0.11
LINC00339-202ENST00000416769 GPR152Q8TDT2 470 aa14.37□□□□□ -0.11
LINC00339-202ENST00000416769 SMG7Q92540 1137 aaKnown RBP14.37□□□□□ -0.11
LINC00339-202ENST00000416769 PHF20Q9BVI0 1012 aa14.37□□□□□ -0.11
LINC00339-202ENST00000416769 CNTNAP2Q9UHC6 1331 aa14.37□□□□□ -0.11
LINC00339-202ENST00000416769 NCOR2Q9Y618 2525 aa14.36□□□□□ -0.11
LINC00339-202ENST00000416769 SPTBN2O15020 2390 aa14.36□□□□□ -0.11
LINC00339-202ENST00000416769 POTEMA6NI47 508 aa14.36□□□□□ -0.11
LINC00339-202ENST00000416769 TTLL13PA6NNM8 815 aa14.36□□□□□ -0.11
LINC00339-202ENST00000416769 CPLX1O14810 134 aa14.36□□□□□ -0.11
LINC00339-202ENST00000416769 CCNT1O60563 726 aaKnown RBP14.36□□□□□ -0.11
LINC00339-202ENST00000416769 GLUD1P00367 558 aa14.36□□□□□ -0.11
LINC00339-202ENST00000416769 P4HBP07237 508 aaKnown RBP14.36□□□□□ -0.11
LINC00339-202ENST00000416769 IGFBP6P24592 240 aaPredicted RBP14.36□□□□□ -0.11
LINC00339-202ENST00000416769 NTHL1P78549 312 aa14.36□□□□□ -0.11
LINC00339-202ENST00000416769 MBTD1Q05BQ5 628 aa14.36□□□□□ -0.11
LINC00339-202ENST00000416769 SCRN1Q12765 414 aa14.36□□□□□ -0.11
LINC00339-202ENST00000416769 CAPSQ13938 189 aa14.36□□□□□ -0.11
LINC00339-202ENST00000416769 PRSS55Q6UWB4 352 aaPredicted RBP14.36□□□□□ -0.11
LINC00339-202ENST00000416769 KRT25Q7Z3Z0 450 aa14.36□□□□□ -0.11
LINC00339-202ENST00000416769 NEK8Q86SG6 692 aa14.36□□□□□ -0.11
LINC00339-202ENST00000416769 CMASQ8NFW8 434 aaPredicted RBP14.36□□□□□ -0.11
LINC00339-202ENST00000416769 HASPINQ8TF76 798 aa14.36□□□□□ -0.11
LINC00339-202ENST00000416769 FOXQ1Q9C009 403 aa14.36□□□□□ -0.11
LINC00339-202ENST00000416769 TBC1D17Q9HA65 648 aa14.36□□□□□ -0.11
LINC00339-202ENST00000416769 RXFP1Q9HBX9 757 aa14.36□□□□□ -0.11
LINC00339-202ENST00000416769 FOXD4L1Q9NU39 408 aa14.36□□□□□ -0.11
LINC00339-202ENST00000416769 USP20Q9Y2K6 914 aa14.36□□□□□ -0.11
LINC00339-202ENST00000416769 MYH15Q9Y2K3 1946 aa14.36□□□□□ -0.11
LINC00339-202ENST00000416769 VWA8A3KMH1 1905 aa14.35□□□□□ -0.11
LINC00339-202ENST00000416769 INO80B-WBP1J3KQ70 363 aa14.35□□□□□ -0.11
LINC00339-202ENST00000416769 STK25O00506 426 aa14.35□□□□□ -0.11
LINC00339-202ENST00000416769 TGM5O43548 720 aa14.35□□□□□ -0.11
LINC00339-202ENST00000416769 CTDNEP1O95476 244 aa14.35□□□□□ -0.11
LINC00339-202ENST00000416769 ADH1AP07327 375 aa14.35□□□□□ -0.11
LINC00339-202ENST00000416769 GLULP15104 373 aa14.35□□□□□ -0.11
LINC00339-202ENST00000416769 ARF4P18085 180 aaPredicted RBP14.35□□□□□ -0.11
LINC00339-202ENST00000416769 RFC5P40937 340 aa14.35□□□□□ -0.11
LINC00339-202ENST00000416769 PTENP60484 403 aa14.35□□□□□ -0.11
LINC00339-202ENST00000416769 DSG1Q02413 1049 aa14.35□□□□□ -0.11
LINC00339-202ENST00000416769 NR5A1Q13285 461 aa14.35□□□□□ -0.11
LINC00339-202ENST00000416769 EPHA7Q15375 998 aa14.35□□□□□ -0.11
LINC00339-202ENST00000416769 TPH2Q8IWU9 490 aa14.35□□□□□ -0.11
LINC00339-202ENST00000416769 C4orf19Q8IY42 314 aa14.35□□□□□ -0.11
LINC00339-202ENST00000416769 TMX3Q96JJ7 454 aa14.35□□□□□ -0.11
LINC00339-202ENST00000416769 MTRQ99707 1265 aa14.35□□□□□ -0.11
LINC00339-202ENST00000416769 GPRC5CQ9NQ84 441 aa14.35□□□□□ -0.11
LINC00339-202ENST00000416769 CHST7Q9NS84 486 aa14.35□□□□□ -0.11
LINC00339-202ENST00000416769 IGSF9Q9P2J2 1179 aa14.35□□□□□ -0.11
LINC00339-202ENST00000416769 KANSL3Q9P2N6 904 aa14.35□□□□□ -0.11
LINC00339-202ENST00000416769 EPS15L1Q9UBC2 864 aa14.35□□□□□ -0.11
LINC00339-202ENST00000416769 RBM19Q9Y4C8 960 aaKnown RBP14.35□□□□□ -0.11
LINC00339-202ENST00000416769 FANCMQ8IYD8 2048 aa14.34□□□□□ -0.11
LINC00339-202ENST00000416769 NOTCH4Q99466 2003 aa14.34□□□□□ -0.11
LINC00339-202ENST00000416769 CCDC194A0A1B0GVG4 234 aa14.34□□□□□ -0.11
LINC00339-202ENST00000416769 K7ELQ4 463 aaPredicted RBP14.34□□□□□ -0.11
LINC00339-202ENST00000416769 ADAM12O43184 909 aa14.34□□□□□ -0.11
LINC00339-202ENST00000416769 ERLIN2O94905 339 aa14.34□□□□□ -0.11
LINC00339-202ENST00000416769 LARGE1O95461 756 aa14.34□□□□□ -0.11
LINC00339-202ENST00000416769 NPTXRO95502 500 aa14.34□□□□□ -0.11
LINC00339-202ENST00000416769 GLRA2P23416 452 aa14.34□□□□□ -0.11
LINC00339-202ENST00000416769 ID4P47928 161 aa14.34□□□□□ -0.11
LINC00339-202ENST00000416769 FOSBP53539 338 aa14.34□□□□□ -0.11
LINC00339-202ENST00000416769 HTR4Q13639 388 aa14.34□□□□□ -0.11
LINC00339-202ENST00000416769 RTP2Q5QGT7 225 aa14.34□□□□□ -0.11
LINC00339-202ENST00000416769 FUT10Q6P4F1 479 aa14.34□□□□□ -0.11
LINC00339-202ENST00000416769 HSCBQ8IWL3 235 aa14.34□□□□□ -0.11
LINC00339-202ENST00000416769 RSPH1Q8WYR4 309 aa14.34□□□□□ -0.11
LINC00339-202ENST00000416769 RMDN1Q96DB5 314 aa14.34□□□□□ -0.11
LINC00339-202ENST00000416769 FAM20AQ96MK3 541 aa14.34□□□□□ -0.11
LINC00339-202ENST00000416769 JPH2Q9BR39 696 aaPredicted RBP14.34□□□□□ -0.11
LINC00339-202ENST00000416769 NT5C3AQ9H0P0 336 aa14.34□□□□□ -0.11
LINC00339-202ENST00000416769 CSRNP2Q9H175 543 aa14.34□□□□□ -0.11
LINC00339-202ENST00000416769 DLGAP2Q9P1A6 1054 aa14.34□□□□□ -0.11
LINC00339-202ENST00000416769 NUMBLQ9Y6R0 609 aa14.34□□□□□ -0.11
LINC00339-202ENST00000416769 DNAH14Q0VDD8 3507 aa14.33□□□□□ -0.11
LINC00339-202ENST00000416769 GAS2O43903 313 aaKnown RBP14.33□□□□□ -0.12
LINC00339-202ENST00000416769 SLITRK3O94933 977 aa14.33□□□□□ -0.12
LINC00339-202ENST00000416769 EDN1P05305 212 aa14.33□□□□□ -0.12
LINC00339-202ENST00000416769 BECN1Q14457 450 aa14.33□□□□□ -0.12
LINC00339-202ENST00000416769 PPP4R3AQ6IN85 833 aa14.33□□□□□ -0.12
LINC00339-202ENST00000416769 NOTUMQ6P988 496 aa14.33□□□□□ -0.12
LINC00339-202ENST00000416769 LILRA6Q6PI73 481 aa14.33□□□□□ -0.12
LINC00339-202ENST00000416769 MAEAQ7L5Y9 396 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms