RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 CTIFO43310 598 aaKnown RBP9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 CA12O43570 354 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 GFPT2O94808 682 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 VNN1O95497 513 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 C4BPAP04003 597 aaKnown RBP9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 TUBB4AP04350 444 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 CASQ1P31415 396 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 GTF2F1P35269 517 aaKnown RBP eCLIP9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 SOX5P35711 763 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 PRKCIP41743 596 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 MAGEA1P43355 309 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 VAV2P52735 878 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 KRT83P78385 493 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 KLHL30Q0D2K2 578 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 STRN3Q13033 797 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 TRIM32Q13049 653 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 PSMD6Q15008 389 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 SLC9C1Q4G0N8 1177 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 MTHFD1LQ6UB35 978 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 SV2AQ7L0J3 742 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 ZBTB33Q86T24 672 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 CDR2LQ86X02 465 aaPredicted RBP9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 MSL3Q8N5Y2 521 aaKnown RBP9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 METTL13Q8N6R0 699 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 OR5B17Q8NGF7 314 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 LNX1Q8TBB1 728 aaPredicted RBP9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 HELQQ8TDG4 1101 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 TCP11Q8WWU5 503 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 JAKMIP2Q96AA8 810 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 BICD1Q96G01 975 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 PPP1R16BQ96T49 567 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 PI4K2AQ9BTU6 479 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 NUCKS1Q9H1E3 243 aaKnown RBP9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 TUT1Q9H6E5 874 aaKnown RBP9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 CDHR5Q9HBB8 845 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 UBE2TQ9NPD8 197 aaPredicted RBP9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 SETD4Q9NVD3 440 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 ADAMTS1Q9UHI8 967 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 KCNG1Q9UIX4 513 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 AGO2Q9UKV8 859 aaKnown RBP9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 MYO6Q9UM54 1294 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 PLXNB2O15031 1838 aa9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 A0A087WZ62 844 aa9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 MYADML2A6NDP7 307 aa9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 ZNF233A6NK53 670 aa9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 F8VZ95 297 aa9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 TULP1O00294 542 aaPredicted RBP9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 AKR1B10O60218 316 aa9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 URI1O94763 535 aaPredicted RBP9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 MOCS3O95396 460 aa9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 CALCAP01258 141 aa9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 VTNP04004 478 aa9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 CHRNB2P17787 502 aa9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 PROZP22891 400 aa9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 STAT1P42224 750 aa9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 GPC3P51654 580 aa9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 ZNF200P98182 395 aaPredicted RBP9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 BEX3Q00994 111 aa9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 MBTD1Q05BQ5 628 aa9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 GRM1Q13255 1194 aa9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 PRPF4BQ13523 1007 aaKnown RBP9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 MXD4Q14582 209 aaPredicted RBP9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 GRIK4Q16099 956 aa9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 AMHR2Q16671 573 aa9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 ARHGAP44Q17R89 818 aa9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 CCDC122Q5T0U0 273 aa9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 SLFN12LQ6IEE8 588 aa9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 ZPBP2Q6X784 338 aa9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 TMEM192Q8IY95 271 aa9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 SMC1BQ8NDV3 1235 aa9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 PCDHB18PQ96TA0 734 aa9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 FDXACB1Q9BRP7 624 aaPredicted RBP9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 MSTO1Q9BUK6 570 aa9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 GPBP1L1Q9HC44 474 aaPredicted RBP9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 TMEM8AQ9HCN3 771 aa9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 ACP6Q9NPH0 428 aa9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 APEX2Q9UBZ4 518 aa9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 ZNF215Q9UL58 517 aaPredicted RBP9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 ABT1Q9ULW3 272 aaKnown RBP9.36□□□□□ -0.91
HMGN1P34-201ENST00000413023 LOXHD1Q8IVV2 1947 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 HAS3O00219 553 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 ACKR2O00590 384 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 GAS2O43903 313 aaKnown RBP9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 EVI5O60447 810 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 SGPL1O95470 568 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 TBC1D8O95759 1140 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 CST3P01034 146 aaPredicted RBP9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 PRKCBP05771 671 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 DLATP10515 647 aaKnown RBP9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 FERP16591 822 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 GTF2H1P32780 548 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 EFNA5P52803 228 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 ADAM17P78536 824 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 AMPD2Q01433 879 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 MCL1Q07820 350 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 KIF22Q14807 665 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 SPA17Q15506 151 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 DGKDQ16760 1214 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 ARHGAP29Q52LW3 1261 aa9.35□□□□□ -0.91
HMGN1P34-201ENST00000413023 TDRD10Q5VZ19 366 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms