RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 RIPOR3Q96MK2 946 aa18.31■□□□□ 0.52
SCAMP4-203ENST00000411971 FAM193BQ96PV7 902 aaPredicted RBP18.31■□□□□ 0.52
SCAMP4-203ENST00000411971 RPS6KC1Q96S38 1066 aa18.31■□□□□ 0.52
SCAMP4-203ENST00000411971 SORCS3Q9UPU3 1222 aa18.31■□□□□ 0.52
SCAMP4-203ENST00000411971 TFDP1Q14186 410 aa18.3■□□□□ 0.52
SCAMP4-203ENST00000411971 ATAT1Q5SQI0 421 aa18.3■□□□□ 0.52
SCAMP4-203ENST00000411971 ZBTB33Q86T24 672 aa18.3■□□□□ 0.52
SCAMP4-203ENST00000411971 ZDHHC14Q8IZN3 488 aa18.3■□□□□ 0.52
SCAMP4-203ENST00000411971 CNNM3Q8NE01 707 aa18.3■□□□□ 0.52
SCAMP4-203ENST00000411971 CCDC51Q96ER9 411 aa18.3■□□□□ 0.52
SCAMP4-203ENST00000411971 MAN1C1Q9NR34 630 aa18.3■□□□□ 0.52
SCAMP4-203ENST00000411971 MRPL17Q9NRX2 175 aaKnown RBP18.3■□□□□ 0.52
SCAMP4-203ENST00000411971 FAM86C1Q9NVL1 165 aa18.3■□□□□ 0.52
SCAMP4-203ENST00000411971 DBR1Q9UK59 544 aaKnown RBP18.3■□□□□ 0.52
SCAMP4-203ENST00000411971 LRRIQ4A6NIV6 560 aa18.29■□□□□ 0.52
SCAMP4-203ENST00000411971 RFPL2O75678 378 aa18.29■□□□□ 0.52
SCAMP4-203ENST00000411971 XRCC6P12956 609 aaKnown RBP eCLIP18.29■□□□□ 0.52
SCAMP4-203ENST00000411971 RPL17P18621 184 aaKnown RBP18.29■□□□□ 0.52
SCAMP4-203ENST00000411971 TRIM29Q14134 588 aa18.29■□□□□ 0.52
SCAMP4-203ENST00000411971 BMS1Q14692 1282 aaKnown RBP18.29■□□□□ 0.52
SCAMP4-203ENST00000411971 EEF1DP3Q658K8 133 aa18.29■□□□□ 0.52
SCAMP4-203ENST00000411971 CDCA2Q69YH5 1023 aaPredicted RBP18.29■□□□□ 0.52
SCAMP4-203ENST00000411971 PPP4R3CPQ6ZMV5 832 aa18.29■□□□□ 0.52
SCAMP4-203ENST00000411971 SUGP1Q8IWZ8 645 aaKnown RBP18.29■□□□□ 0.52
SCAMP4-203ENST00000411971 TDRD5Q8NAT2 981 aaKnown RBP18.29■□□□□ 0.52
SCAMP4-203ENST00000411971 KIFC3Q9BVG8 833 aa18.29■□□□□ 0.52
SCAMP4-203ENST00000411971 CCDC113Q9H0I3 377 aa18.29■□□□□ 0.52
SCAMP4-203ENST00000411971 FZD8Q9H461 694 aa18.29■□□□□ 0.52
SCAMP4-203ENST00000411971 PDZD7Q9H5P4 517 aa18.29■□□□□ 0.52
SCAMP4-203ENST00000411971 SFXN1Q9H9B4 322 aa18.29■□□□□ 0.52
SCAMP4-203ENST00000411971 RXFP1Q9HBX9 757 aa18.29■□□□□ 0.52
SCAMP4-203ENST00000411971 TUFT1Q9NNX1 390 aa18.29■□□□□ 0.52
SCAMP4-203ENST00000411971 UBN1Q9NPG3 1134 aa18.29■□□□□ 0.52
SCAMP4-203ENST00000411971 CHST7Q9NS84 486 aa18.29■□□□□ 0.52
SCAMP4-203ENST00000411971 LIMCH1Q9UPQ0 1083 aa18.29■□□□□ 0.52
SCAMP4-203ENST00000411971 GIT1Q9Y2X7 761 aa18.29■□□□□ 0.52
SCAMP4-203ENST00000411971 VPS13AQ96RL7 3174 aa18.29■□□□□ 0.52
SCAMP4-203ENST00000411971 PTGESO14684 152 aa18.28■□□□□ 0.52
SCAMP4-203ENST00000411971 URODP06132 367 aa18.28■□□□□ 0.52
SCAMP4-203ENST00000411971 TOB1P50616 345 aaPredicted RBP18.28■□□□□ 0.52
SCAMP4-203ENST00000411971 DSG1Q02413 1049 aa18.28■□□□□ 0.52
SCAMP4-203ENST00000411971 PCBP1Q15365 356 aaKnown RBP eCLIP18.28■□□□□ 0.52
SCAMP4-203ENST00000411971 NAB2Q15742 525 aa18.28■□□□□ 0.52
SCAMP4-203ENST00000411971 FUT10Q6P4F1 479 aa18.28■□□□□ 0.52
SCAMP4-203ENST00000411971 SLC27A1Q6PCB7 646 aa18.28■□□□□ 0.52
SCAMP4-203ENST00000411971 GLYCTKQ8IVS8 523 aa18.28■□□□□ 0.52
SCAMP4-203ENST00000411971 TMEM105Q8N8V8 129 aa18.28■□□□□ 0.52
SCAMP4-203ENST00000411971 TMEM87AQ8NBN3 555 aa18.28■□□□□ 0.52
SCAMP4-203ENST00000411971 ZNF707Q96C28 371 aaPredicted RBP18.28■□□□□ 0.52
SCAMP4-203ENST00000411971 C8orf76Q96K31 380 aa18.28■□□□□ 0.52
SCAMP4-203ENST00000411971 POLR3CQ9BUI4 534 aaPredicted RBP18.28■□□□□ 0.52
SCAMP4-203ENST00000411971 EMILIN2Q9BXX0 1053 aa18.28■□□□□ 0.52
SCAMP4-203ENST00000411971 NOTCH4Q99466 2003 aa18.27■□□□□ 0.52
SCAMP4-203ENST00000411971 CARNS1A5YM72 827 aa18.27■□□□□ 0.52
SCAMP4-203ENST00000411971 OR52Z1P0C646 297 aa18.27■□□□□ 0.52
SCAMP4-203ENST00000411971 GLUD2P49448 558 aa18.27■□□□□ 0.52
SCAMP4-203ENST00000411971 MTMR3Q13615 1198 aa18.27■□□□□ 0.52
SCAMP4-203ENST00000411971 PADI6Q6TGC4 694 aa18.27■□□□□ 0.52
SCAMP4-203ENST00000411971 PPFIBP1Q86W92 1011 aa18.27■□□□□ 0.52
SCAMP4-203ENST00000411971 FBXO18Q8NFZ0 1043 aa18.27■□□□□ 0.52
SCAMP4-203ENST00000411971 HASPINQ8TF76 798 aa18.27■□□□□ 0.52
SCAMP4-203ENST00000411971 SNTG2Q9NY99 539 aa18.27■□□□□ 0.52
SCAMP4-203ENST00000411971 PARP2Q9UGN5 583 aa18.27■□□□□ 0.52
SCAMP4-203ENST00000411971 USTQ9Y2C2 406 aa18.27■□□□□ 0.52
SCAMP4-203ENST00000411971 RPA1P27694 616 aa18.26■□□□□ 0.51
SCAMP4-203ENST00000411971 IL17AQ16552 155 aa18.26■□□□□ 0.51
SCAMP4-203ENST00000411971 FAM187BQ17R55 369 aa18.26■□□□□ 0.51
SCAMP4-203ENST00000411971 TTC38Q5R3I4 469 aa18.26■□□□□ 0.51
SCAMP4-203ENST00000411971 PRSS55Q6UWB4 352 aaPredicted RBP18.26■□□□□ 0.51
SCAMP4-203ENST00000411971 PALB2Q86YC2 1186 aa18.26■□□□□ 0.51
SCAMP4-203ENST00000411971 NOSTRINQ8IVI9 506 aa18.26■□□□□ 0.51
SCAMP4-203ENST00000411971 ST13P5Q8NFI4 369 aaPredicted RBP18.26■□□□□ 0.51
SCAMP4-203ENST00000411971 RSAD2Q8WXG1 361 aa18.26■□□□□ 0.51
SCAMP4-203ENST00000411971 CCDC43Q96MW1 224 aaKnown RBP18.26■□□□□ 0.51
SCAMP4-203ENST00000411971 NACC1Q96RE7 527 aa18.26■□□□□ 0.51
SCAMP4-203ENST00000411971 TRIM6Q9C030 488 aaPredicted RBP18.26■□□□□ 0.51
SCAMP4-203ENST00000411971 CCDC195A0A1B0GUA6 201 aa18.25■□□□□ 0.51
SCAMP4-203ENST00000411971 CASTOR2A6NHX0 329 aa18.25■□□□□ 0.51
SCAMP4-203ENST00000411971 PP2D1A8MPX8 630 aa18.25■□□□□ 0.51
SCAMP4-203ENST00000411971 TGM5O43548 720 aa18.25■□□□□ 0.51
SCAMP4-203ENST00000411971 NARSO43776 548 aaKnown RBP18.25■□□□□ 0.51
SCAMP4-203ENST00000411971 CYP11B2P19099 503 aa18.25■□□□□ 0.51
SCAMP4-203ENST00000411971 GRIK3Q13003 919 aa18.25■□□□□ 0.51
SCAMP4-203ENST00000411971 C8orf34Q49A92 452 aa18.25■□□□□ 0.51
SCAMP4-203ENST00000411971 RTP2Q5QGT7 225 aa18.25■□□□□ 0.51
SCAMP4-203ENST00000411971 ERICH6BQ5W0A0 696 aa18.25■□□□□ 0.51
SCAMP4-203ENST00000411971 LILRA6Q6PI73 481 aa18.25■□□□□ 0.51
SCAMP4-203ENST00000411971 UBALD2Q8IYN6 164 aa18.25■□□□□ 0.51
SCAMP4-203ENST00000411971 MYADMQ96S97 322 aa18.25■□□□□ 0.51
SCAMP4-203ENST00000411971 LLPHQ9BRT6 129 aaKnown RBP18.25■□□□□ 0.51
SCAMP4-203ENST00000411971 FOXP1Q9H334 677 aaPredicted RBP18.25■□□□□ 0.51
SCAMP4-203ENST00000411971 ADAM28Q9UKQ2 775 aa18.25■□□□□ 0.51
SCAMP4-203ENST00000411971 PCDHB6Q9Y5E3 794 aa18.25■□□□□ 0.51
SCAMP4-203ENST00000411971 CFAP54Q96N23 3096 aa18.25■□□□□ 0.51
SCAMP4-203ENST00000411971 COL4A3Q01955 1670 aa18.25■□□□□ 0.51
SCAMP4-203ENST00000411971 H0Y858 1186 aa18.24■□□□□ 0.51
SCAMP4-203ENST00000411971 ADAM12O43184 909 aa18.24■□□□□ 0.51
SCAMP4-203ENST00000411971 RECQL4O94761 1208 aa18.24■□□□□ 0.51
SCAMP4-203ENST00000411971 KIF4AO95239 1232 aa18.24■□□□□ 0.51
SCAMP4-203ENST00000411971 NPR3P17342 541 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms