RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 HCSTQ9UBK5 93 aa21.77■■□□□ 1.08
PDLIM2-207ENST00000409417 INPP5FQ9Y2H2 1132 aa21.77■■□□□ 1.08
PDLIM2-207ENST00000409417 STXBP5LQ9Y2K9 1186 aa21.77■■□□□ 1.08
PDLIM2-207ENST00000409417 H3BNC9 293 aa21.77■■□□□ 1.07
PDLIM2-207ENST00000409417 ZNF568Q3ZCX4 644 aa21.77■■□□□ 1.07
PDLIM2-207ENST00000409417 TPRNQ4KMQ1 711 aa21.77■■□□□ 1.07
PDLIM2-207ENST00000409417 SPOUT1Q5T280 376 aaKnown RBP21.77■■□□□ 1.07
PDLIM2-207ENST00000409417 URGCPQ8TCY9 931 aa21.77■■□□□ 1.07
PDLIM2-207ENST00000409417 TCHPQ9BT92 498 aa21.77■■□□□ 1.07
PDLIM2-207ENST00000409417 APOL6Q9BWW8 343 aa21.77■■□□□ 1.07
PDLIM2-207ENST00000409417 GOLPH3LQ9H4A5 285 aa21.77■■□□□ 1.07
PDLIM2-207ENST00000409417 TBC1D13Q9NVG8 400 aa21.77■■□□□ 1.07
PDLIM2-207ENST00000409417 PCDHB12Q9Y5F1 795 aa21.77■■□□□ 1.07
PDLIM2-207ENST00000409417 ZMYM2Q9UBW7 1377 aa21.76■■□□□ 1.07
PDLIM2-207ENST00000409417 ARL5CA6NH57 179 aa21.76■■□□□ 1.07
PDLIM2-207ENST00000409417 ABLIM1O14639 778 aa21.76■■□□□ 1.07
PDLIM2-207ENST00000409417 FOSL2P15408 326 aa21.76■■□□□ 1.07
PDLIM2-207ENST00000409417 LAG3P18627 525 aa21.76■■□□□ 1.07
PDLIM2-207ENST00000409417 AKAP5P24588 427 aa21.76■■□□□ 1.07
PDLIM2-207ENST00000409417 AFMP43652 599 aa21.76■■□□□ 1.07
PDLIM2-207ENST00000409417 AFF1P51825 1210 aaKnown RBP21.76■■□□□ 1.07
PDLIM2-207ENST00000409417 CSPP1Q1MSJ5 1256 aa21.76■■□□□ 1.07
PDLIM2-207ENST00000409417 ZC2HC1CQ53FD0 456 aaPredicted RBP21.76■■□□□ 1.07
PDLIM2-207ENST00000409417 MPZL3Q6UWV2 235 aa21.76■■□□□ 1.07
PDLIM2-207ENST00000409417 MAP4K3Q8IVH8 894 aa21.76■■□□□ 1.07
PDLIM2-207ENST00000409417 GDPD5Q8WTR4 605 aa21.76■■□□□ 1.07
PDLIM2-207ENST00000409417 P2RX5Q93086 422 aa21.76■■□□□ 1.07
PDLIM2-207ENST00000409417 PAGE5Q96GU1 130 aa21.76■■□□□ 1.07
PDLIM2-207ENST00000409417 IPO9Q96P70 1041 aaKnown RBP21.76■■□□□ 1.07
PDLIM2-207ENST00000409417 GAD1Q99259 594 aa21.76■■□□□ 1.07
PDLIM2-207ENST00000409417 STRA6Q9BX79 667 aa21.76■■□□□ 1.07
PDLIM2-207ENST00000409417 CDT1Q9H211 546 aa21.76■■□□□ 1.07
PDLIM2-207ENST00000409417 TBC1D7Q9P0N9 293 aa21.76■■□□□ 1.07
PDLIM2-207ENST00000409417 HNRNPDLO14979 420 aaKnown RBP21.75■■□□□ 1.07
PDLIM2-207ENST00000409417 PPP1R37O75864 691 aa21.75■■□□□ 1.07
PDLIM2-207ENST00000409417 PIGRP01833 764 aa21.75■■□□□ 1.07
PDLIM2-207ENST00000409417 MCF2P10911 925 aa21.75■■□□□ 1.07
PDLIM2-207ENST00000409417 POU3F3P20264 500 aaPredicted RBP21.75■■□□□ 1.07
PDLIM2-207ENST00000409417 MLH1P40692 756 aa21.75■■□□□ 1.07
PDLIM2-207ENST00000409417 COASYQ13057 564 aa21.75■■□□□ 1.07
PDLIM2-207ENST00000409417 GPM6BQ13491 265 aa21.75■■□□□ 1.07
PDLIM2-207ENST00000409417 HVCN1Q96D96 273 aa21.75■■□□□ 1.07
PDLIM2-207ENST00000409417 BICD1Q96G01 975 aa21.75■■□□□ 1.07
PDLIM2-207ENST00000409417 BLZF1Q9H2G9 400 aa21.75■■□□□ 1.07
PDLIM2-207ENST00000409417 PARP2Q9UGN5 583 aa21.75■■□□□ 1.07
PDLIM2-207ENST00000409417 PCDHB13Q9Y5F0 798 aa21.75■■□□□ 1.07
PDLIM2-207ENST00000409417 CLDN3O15551 220 aa21.74■■□□□ 1.07
PDLIM2-207ENST00000409417 ZNF202O95125 648 aa21.74■■□□□ 1.07
PDLIM2-207ENST00000409417 IGFBP4P22692 258 aa21.74■■□□□ 1.07
PDLIM2-207ENST00000409417 RNASELQ05823 741 aaKnown RBP21.74■■□□□ 1.07
PDLIM2-207ENST00000409417 ALCAMQ13740 583 aa21.74■■□□□ 1.07
PDLIM2-207ENST00000409417 GRAMD1CQ8IYS0 662 aa21.74■■□□□ 1.07
PDLIM2-207ENST00000409417 COLGALT1Q8NBJ5 622 aa21.74■■□□□ 1.07
PDLIM2-207ENST00000409417 ZBTB45Q96K62 511 aaPredicted RBP21.74■■□□□ 1.07
PDLIM2-207ENST00000409417 ZFP42Q96MM3 310 aa21.74■■□□□ 1.07
PDLIM2-207ENST00000409417 SNTG2Q9NY99 539 aa21.74■■□□□ 1.07
PDLIM2-207ENST00000409417 ANKFY1Q9P2R3 1169 aa21.74■■□□□ 1.07
PDLIM2-207ENST00000409417 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.73■■□□□ 1.07
PDLIM2-207ENST00000409417 PVALEFA0A1B0GWK0 134 aa21.73■■□□□ 1.07
PDLIM2-207ENST00000409417 RECQL4O94761 1208 aa21.73■■□□□ 1.07
PDLIM2-207ENST00000409417 MYL1P05976 194 aa21.73■■□□□ 1.07
PDLIM2-207ENST00000409417 CASP1P29466 404 aa21.73■■□□□ 1.07
PDLIM2-207ENST00000409417 ALDH7A1P49419 539 aaKnown RBP21.73■■□□□ 1.07
PDLIM2-207ENST00000409417 LIG4P49917 911 aa21.73■■□□□ 1.07
PDLIM2-207ENST00000409417 MCL1Q07820 350 aa21.73■■□□□ 1.07
PDLIM2-207ENST00000409417 CUL4BQ13620 913 aa21.73■■□□□ 1.07
PDLIM2-207ENST00000409417 NOLC1Q14978 699 aaKnown RBP eCLIP21.73■■□□□ 1.07
PDLIM2-207ENST00000409417 KCNT2Q6UVM3 1135 aa21.73■■□□□ 1.07
PDLIM2-207ENST00000409417 UNC13DQ70J99 1090 aa21.73■■□□□ 1.07
PDLIM2-207ENST00000409417 ZBTB33Q86T24 672 aa21.73■■□□□ 1.07
PDLIM2-207ENST00000409417 KLHL23Q8NBE8 558 aa21.73■■□□□ 1.07
PDLIM2-207ENST00000409417 GSTCDQ8NEC7 633 aa21.73■■□□□ 1.07
PDLIM2-207ENST00000409417 ZNF558Q96NG5 402 aa21.73■■□□□ 1.07
PDLIM2-207ENST00000409417 LMCD1Q9NZU5 365 aa21.73■■□□□ 1.07
PDLIM2-207ENST00000409417 PLAGL2Q9UPG8 496 aa21.73■■□□□ 1.07
PDLIM2-207ENST00000409417 GDAQ9Y2T3 454 aa21.73■■□□□ 1.07
PDLIM2-207ENST00000409417 COL6A3P12111 3177 aa21.73■■□□□ 1.07
PDLIM2-207ENST00000409417 PRRC2BQ5JSZ5 2229 aaKnown RBP21.73■■□□□ 1.07
PDLIM2-207ENST00000409417 RALGAPA2Q2PPJ7 1873 aa21.73■■□□□ 1.07
PDLIM2-207ENST00000409417 CARNS1A5YM72 827 aa21.72■■□□□ 1.07
PDLIM2-207ENST00000409417 GTPBP6O43824 516 aaPredicted RBP21.72■■□□□ 1.07
PDLIM2-207ENST00000409417 GCNT3O95395 438 aa21.72■■□□□ 1.07
PDLIM2-207ENST00000409417 POMCP01189 267 aa21.72■■□□□ 1.07
PDLIM2-207ENST00000409417 GRM5P41594 1212 aa21.72■■□□□ 1.07
PDLIM2-207ENST00000409417 KRBA2Q6ZNG9 492 aa21.72■■□□□ 1.07
PDLIM2-207ENST00000409417 NRDE2Q9H7Z3 1164 aa21.72■■□□□ 1.07
PDLIM2-207ENST00000409417 KLK14Q9P0G3 267 aa21.72■■□□□ 1.07
PDLIM2-207ENST00000409417 MTCH2Q9Y6C9 303 aa21.72■■□□□ 1.07
PDLIM2-207ENST00000409417 ZC3H11AO75152 810 aaKnown RBP eCLIP21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 ITGB1P05556 798 aa21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 PPM1AP35813 382 aa21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 SCNN1GP51170 649 aa21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 CASP5P51878 434 aa21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 BCAR1P56945 870 aa21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 EHHADHQ08426 723 aa21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 PTPROQ16827 1216 aa21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 L1TD1Q5T7N2 865 aaKnown RBP21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 ZNF280BQ86YH2 543 aa21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 THNSL1Q8IYQ7 743 aa21.71■■□□□ 1.07
PDLIM2-207ENST00000409417 ACCSQ96QU6 501 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms