RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 GPS1Q13098 491 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 NBPF20Q3BBV1 942 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 MFSD14BQ5SR56 506 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 C12orf60Q5U649 245 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 CASC4Q6P4E1 433 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 FBXO11Q86XK2 927 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 MAP7D3Q8IWC1 876 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 RNF25Q96BH1 459 aaPredicted RBP7.87□□□□□ -1.15
HDAC9-202ENST00000405010 CCDC124Q96CT7 223 aaKnown RBP7.87□□□□□ -1.15
HDAC9-202ENST00000405010 FERMT1Q9BQL6 677 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 IPO5O00410 1097 aaKnown RBP7.86□□□□□ -1.15
HDAC9-202ENST00000405010 LIN7AO14910 233 aaPredicted RBP7.86□□□□□ -1.15
HDAC9-202ENST00000405010 ATMINO43313 823 aaPredicted RBP7.86□□□□□ -1.15
HDAC9-202ENST00000405010 RTN2O75298 545 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 CBX6O95503 412 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 ENO1P06733 434 aaKnown RBP7.86□□□□□ -1.15
HDAC9-202ENST00000405010 PAEPP09466 180 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 PTPN4P29074 926 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 CPA2P48052 419 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 DYNLT1P63172 113 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 OVGP1Q12889 678 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 PDIA2Q13087 525 aaKnown RBP7.86□□□□□ -1.15
HDAC9-202ENST00000405010 AUHQ13825 339 aaKnown RBP7.86□□□□□ -1.15
HDAC9-202ENST00000405010 AOC3Q16853 763 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 DAB2IPQ5VWQ8 1189 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 OLFML2BQ68BL8 750 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 LVRNQ6Q4G3 990 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 LRRC55Q6ZSA7 311 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 DPH6Q7L8W6 267 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 CRLF3Q8IUI8 442 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 NSUN4Q96CB9 384 aaKnown RBP7.86□□□□□ -1.15
HDAC9-202ENST00000405010 MTBPQ96DY7 904 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 NSL1Q96IY1 281 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 TSSK1BQ9BXA7 367 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 MYLK2Q9H1R3 596 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 THRAP3Q9Y2W1 955 aaKnown RBP7.86□□□□□ -1.15
HDAC9-202ENST00000405010 ZNF711Q9Y462 761 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 CHD2O14647 1828 aaKnown RBP7.86□□□□□ -1.15
HDAC9-202ENST00000405010 ABCC6O95255 1503 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 SMIM22K7EJ46 135 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 COPEO14579 308 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 SLC37A4O43826 429 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 LCA5LO95447 670 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 TTC4O95801 387 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 MYBP10242 640 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 ATP6V1C1P21283 382 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 MAGEA4P43358 317 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 PTDSS1P48651 473 aaKnown RBP7.86□□□□□ -1.15
HDAC9-202ENST00000405010 BPIFB4P59827 614 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 ZCWPW2Q504Y3 356 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 TAF1BQ53T94 588 aaPredicted RBP7.86□□□□□ -1.15
HDAC9-202ENST00000405010 ATG16L1Q676U5 607 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 SYDE1Q6ZW31 735 aaPredicted RBP7.86□□□□□ -1.15
HDAC9-202ENST00000405010 OPTNQ96CV9 577 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 THTPAQ9BU02 230 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 AMNQ9BXJ7 453 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 RANBP17Q9H2T7 1088 aaKnown RBP7.86□□□□□ -1.15
HDAC9-202ENST00000405010 MRPL47Q9HD33 250 aaKnown RBP7.86□□□□□ -1.15
HDAC9-202ENST00000405010 ZC3H4Q9UPT8 1303 aaKnown RBP7.86□□□□□ -1.15
HDAC9-202ENST00000405010 DDX3XO00571 662 aaKnown RBP eCLIP7.86□□□□□ -1.15
HDAC9-202ENST00000405010 SLC16A3O15427 465 aaKnown RBP7.86□□□□□ -1.15
HDAC9-202ENST00000405010 TOM1L1O75674 476 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 RNF8O76064 485 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 RFC1P35251 1148 aaPredicted RBP7.86□□□□□ -1.15
HDAC9-202ENST00000405010 ARL4CP56559 192 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 MMEL1Q495T6 779 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 MDH1BQ5I0G3 518 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 MIGA2Q7L4E1 593 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 CNBD1Q8NA66 436 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 GLIS3Q8NEA6 775 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 CKAP2Q8WWK9 683 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 REEP2Q9BRK0 252 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 HEY2Q9UBP5 337 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 XRN1Q8IZH2 1706 aaKnown RBP7.86□□□□□ -1.15
HDAC9-202ENST00000405010 FAM208AQ9UK61 1670 aaKnown RBP7.86□□□□□ -1.15
HDAC9-202ENST00000405010 DPPA5A6NC42 116 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 KIAA0391O15091 583 aaKnown RBP7.86□□□□□ -1.15
HDAC9-202ENST00000405010 LPXNO60711 386 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 ENTPD5O75356 428 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 KITP10721 976 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 CD19P15391 556 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 NMT1P30419 496 aaKnown RBP7.86□□□□□ -1.15
HDAC9-202ENST00000405010 DDB1Q16531 1140 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 SBK1Q52WX2 424 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 HGSNATQ68CP4 663 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 SLFN13Q68D06 897 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 MTDHQ86UE4 582 aaKnown RBP7.86□□□□□ -1.15
HDAC9-202ENST00000405010 RIBC1Q8N443 379 aaPredicted RBP7.86□□□□□ -1.15
HDAC9-202ENST00000405010 TRIML2Q8N7C3 387 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 NKX2-3Q8TAU0 364 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 SCFD1Q8WVM8 642 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 TEKT1Q969V4 418 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 FAM84BQ96KN1 310 aaPredicted RBP7.86□□□□□ -1.15
HDAC9-202ENST00000405010 NACC1Q96RE7 527 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 TBC1D10AQ9BXI6 508 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 BLOC1S4Q9NUP1 217 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 ADAM22Q9P0K1 906 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 NAALADL1Q9UQQ1 740 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 MAD1L1Q9Y6D9 718 aa7.86□□□□□ -1.15
HDAC9-202ENST00000405010 EMSYQ7Z589 1322 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms