RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 NOLC1Q14978 699 aaKnown RBP eCLIP19.35■□□□□ 0.69
CTNS-203ENST00000399306 ZNF568Q3ZCX4 644 aa19.35■□□□□ 0.69
CTNS-203ENST00000399306 ZC2HC1CQ53FD0 456 aaPredicted RBP19.35■□□□□ 0.69
CTNS-203ENST00000399306 EEF1DP3Q658K8 133 aa19.35■□□□□ 0.69
CTNS-203ENST00000399306 FAM117BQ6P1L5 589 aa19.35■□□□□ 0.69
CTNS-203ENST00000399306 AGMOQ6ZNB7 445 aa19.35■□□□□ 0.69
CTNS-203ENST00000399306 TMCO2Q7Z6W1 182 aaPredicted RBP19.35■□□□□ 0.69
CTNS-203ENST00000399306 FIBCD1Q8N539 461 aa19.35■□□□□ 0.69
CTNS-203ENST00000399306 BICD1Q96G01 975 aa19.35■□□□□ 0.69
CTNS-203ENST00000399306 CASD1Q96PB1 797 aa19.35■□□□□ 0.69
CTNS-203ENST00000399306 CDT1Q9H211 546 aa19.35■□□□□ 0.69
CTNS-203ENST00000399306 RSAD1Q9HA92 442 aa19.35■□□□□ 0.69
CTNS-203ENST00000399306 LMBRD1Q9NUN5 540 aa19.35■□□□□ 0.69
CTNS-203ENST00000399306 RMND1Q9NWS8 449 aa19.35■□□□□ 0.69
CTNS-203ENST00000399306 LINC01553A4QN01 128 aa19.34■□□□□ 0.69
CTNS-203ENST00000399306 OFD1O75665 1012 aa19.34■□□□□ 0.69
CTNS-203ENST00000399306 KIF20AO95235 890 aa19.34■□□□□ 0.69
CTNS-203ENST00000399306 SMC2O95347 1197 aa19.34■□□□□ 0.69
CTNS-203ENST00000399306 CASP1P29466 404 aa19.34■□□□□ 0.69
CTNS-203ENST00000399306 BTG3Q14201 252 aaPredicted RBP19.34■□□□□ 0.69
CTNS-203ENST00000399306 KMT5BQ4FZB7 885 aa19.34■□□□□ 0.69
CTNS-203ENST00000399306 CLLU1OSQ5K130 101 aa19.34■□□□□ 0.69
CTNS-203ENST00000399306 TBC1D7Q9P0N9 293 aa19.34■□□□□ 0.69
CTNS-203ENST00000399306 CGNQ9P2M7 1197 aaKnown RBP19.34■□□□□ 0.69
CTNS-203ENST00000399306 MYO9BQ13459 2157 aa19.34■□□□□ 0.69
CTNS-203ENST00000399306 CITO14578 2027 aa19.34■□□□□ 0.69
CTNS-203ENST00000399306 A0A0B4J269 797 aa19.33■□□□□ 0.68
CTNS-203ENST00000399306 KIAA0391O15091 583 aaKnown RBP19.33■□□□□ 0.68
CTNS-203ENST00000399306 MYBP10242 640 aa19.33■□□□□ 0.68
CTNS-203ENST00000399306 FGFR1P11362 822 aa19.33■□□□□ 0.68
CTNS-203ENST00000399306 GARTP22102 1010 aa19.33■□□□□ 0.68
CTNS-203ENST00000399306 CASP5P51878 434 aa19.33■□□□□ 0.68
CTNS-203ENST00000399306 ERVK-21P61565 698 aa19.33■□□□□ 0.68
CTNS-203ENST00000399306 TAP1Q03518 808 aa19.33■□□□□ 0.68
CTNS-203ENST00000399306 TPRNQ4KMQ1 711 aa19.33■□□□□ 0.68
CTNS-203ENST00000399306 NOMO2Q5JPE7 1267 aa19.33■□□□□ 0.68
CTNS-203ENST00000399306 PPP2R2DQ66LE6 453 aa19.33■□□□□ 0.68
CTNS-203ENST00000399306 LRRC43Q8N309 656 aa19.33■□□□□ 0.68
CTNS-203ENST00000399306 URGCPQ8TCY9 931 aa19.33■□□□□ 0.68
CTNS-203ENST00000399306 TGS1Q96RS0 853 aaKnown RBP19.33■□□□□ 0.68
CTNS-203ENST00000399306 TCHPQ9BT92 498 aa19.33■□□□□ 0.68
CTNS-203ENST00000399306 CCDC94Q9BW85 323 aaPredicted RBP19.33■□□□□ 0.68
CTNS-203ENST00000399306 NKX2-4Q9H2Z4 354 aa19.33■□□□□ 0.68
CTNS-203ENST00000399306 NXF3Q9H4D5 531 aaKnown RBP19.33■□□□□ 0.68
CTNS-203ENST00000399306 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.33■□□□□ 0.68
CTNS-203ENST00000399306 CHD9Q3L8U1 2897 aa19.32■□□□□ 0.68
CTNS-203ENST00000399306 TBKBP1A7MCY6 615 aa19.32■□□□□ 0.68
CTNS-203ENST00000399306 RB1P06400 928 aa19.32■□□□□ 0.68
CTNS-203ENST00000399306 PRR29P0C7W0 189 aa19.32■□□□□ 0.68
CTNS-203ENST00000399306 HSP90AA2PQ14568 343 aaPredicted RBP19.32■□□□□ 0.68
CTNS-203ENST00000399306 COBLL1Q53SF7 1204 aa19.32■□□□□ 0.68
CTNS-203ENST00000399306 ZNF697Q5TEC3 545 aa19.32■□□□□ 0.68
CTNS-203ENST00000399306 CDR2LQ86X02 465 aaPredicted RBP19.32■□□□□ 0.68
CTNS-203ENST00000399306 RNF169Q8NCN4 708 aa19.32■□□□□ 0.68
CTNS-203ENST00000399306 TMEM174Q8WUU8 243 aa19.32■□□□□ 0.68
CTNS-203ENST00000399306 LRCH3Q96II8 777 aa19.32■□□□□ 0.68
CTNS-203ENST00000399306 TSPAN18Q96SJ8 248 aa19.32■□□□□ 0.68
CTNS-203ENST00000399306 PLVAPQ9BX97 442 aa19.32■□□□□ 0.68
CTNS-203ENST00000399306 ZNF576Q9H609 170 aa19.32■□□□□ 0.68
CTNS-203ENST00000399306 TOPORSQ9NS56 1045 aaPredicted RBP19.32■□□□□ 0.68
CTNS-203ENST00000399306 USP20Q9Y2K6 914 aa19.32■□□□□ 0.68
CTNS-203ENST00000399306 NLRC5Q86WI3 1866 aa19.32■□□□□ 0.68
CTNS-203ENST00000399306 LCHNA4D1U4 455 aa19.31■□□□□ 0.68
CTNS-203ENST00000399306 C5orf67F2Z3F1 127 aa19.31■□□□□ 0.68
CTNS-203ENST00000399306 RBAK-RBAKDNI3L0D1 243 aa19.31■□□□□ 0.68
CTNS-203ENST00000399306 OGTO15294 1046 aa19.31■□□□□ 0.68
CTNS-203ENST00000399306 MYOGP15173 224 aa19.31■□□□□ 0.68
CTNS-203ENST00000399306 XKR4Q5GH76 650 aa19.31■□□□□ 0.68
CTNS-203ENST00000399306 SLC39A4Q6P5W5 647 aa19.31■□□□□ 0.68
CTNS-203ENST00000399306 GOLGA5Q8TBA6 731 aa19.31■□□□□ 0.68
CTNS-203ENST00000399306 HELQQ8TDG4 1101 aa19.31■□□□□ 0.68
CTNS-203ENST00000399306 SCFD1Q8WVM8 642 aa19.31■□□□□ 0.68
CTNS-203ENST00000399306 LPPQ93052 612 aa19.31■□□□□ 0.68
CTNS-203ENST00000399306 FGFBP2Q9BYJ0 223 aa19.31■□□□□ 0.68
CTNS-203ENST00000399306 GBP3Q9H0R5 595 aa19.31■□□□□ 0.68
CTNS-203ENST00000399306 PLEKHA5Q9HAU0 1116 aa19.31■□□□□ 0.68
CTNS-203ENST00000399306 AAASQ9NRG9 546 aa19.31■□□□□ 0.68
CTNS-203ENST00000399306 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.3■□□□□ 0.68
CTNS-203ENST00000399306 ARL5CA6NH57 179 aa19.3■□□□□ 0.68
CTNS-203ENST00000399306 LDHAP00338 332 aaKnown RBP19.3■□□□□ 0.68
CTNS-203ENST00000399306 CLTAP09496 248 aa19.3■□□□□ 0.68
CTNS-203ENST00000399306 LINC00271P0C7V0 271 aa19.3■□□□□ 0.68
CTNS-203ENST00000399306 LAG3P18627 525 aa19.3■□□□□ 0.68
CTNS-203ENST00000399306 YARSP54577 528 aaKnown RBP19.3■□□□□ 0.68
CTNS-203ENST00000399306 STK4Q13043 487 aa19.3■□□□□ 0.68
CTNS-203ENST00000399306 PNOCQ13519 176 aa19.3■□□□□ 0.68
CTNS-203ENST00000399306 C12orf56Q8IXR9 622 aa19.3■□□□□ 0.68
CTNS-203ENST00000399306 SYCP3Q8IZU3 236 aa19.3■□□□□ 0.68
CTNS-203ENST00000399306 KIAA0895Q8NCT3 520 aa19.3■□□□□ 0.68
CTNS-203ENST00000399306 P2RX5Q93086 422 aa19.3■□□□□ 0.68
CTNS-203ENST00000399306 HPS3Q969F9 1004 aa19.3■□□□□ 0.68
CTNS-203ENST00000399306 SMARCE1Q969G3 411 aa19.3■□□□□ 0.68
CTNS-203ENST00000399306 ZBTB45Q96K62 511 aaPredicted RBP19.3■□□□□ 0.68
CTNS-203ENST00000399306 ACAP3Q96P50 834 aa19.3■□□□□ 0.68
CTNS-203ENST00000399306 RNF39Q9H2S5 420 aa19.3■□□□□ 0.68
CTNS-203ENST00000399306 CWH43Q9H720 699 aa19.3■□□□□ 0.68
CTNS-203ENST00000399306 SLC39A2Q9NP94 309 aa19.3■□□□□ 0.68
CTNS-203ENST00000399306 SNTG2Q9NY99 539 aa19.3■□□□□ 0.68
CTNS-203ENST00000399306 ANKFY1Q9P2R3 1169 aa19.3■□□□□ 0.68
CTNS-203ENST00000399306 HES2Q9Y543 173 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms