RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 MCL1Q07820 350 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 SSPNQ14714 243 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 MFSD6Q6ZSS7 791 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 ZNF579Q8NAF0 562 aaKnown RBP7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 ATXN2LQ8WWM7 1075 aaKnown RBP7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 PIGBQ92521 554 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 ABHD8Q96I13 439 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 PLA2G12BQ9BX93 195 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 FOXP1Q9H334 677 aaPredicted RBP7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 RNF41Q9H4P4 317 aaPredicted RBP7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 ATP13A1Q9HD20 1204 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 ST7Q9NRC1 585 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 ATAD3AQ9NVI7 634 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 MALT1Q9UDY8 824 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 ZMYND8Q9ULU4 1186 aaPredicted RBP7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 HPCAL4Q9UM19 191 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 CLRN2A0PK11 232 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 A8MVJ9 347 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 RSPH10B2B2RC85 870 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 DEXIO95424 95 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 CAPNS1P04632 268 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 RSPH10BP0C881 870 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 TMEM11P17152 192 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 IFNAR1P17181 557 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 PTPREP23469 700 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 TXLNAP40222 546 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 CTCFP49711 727 aaPredicted RBP7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 PLCD1P51178 756 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 NUBP1P53384 320 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 CACNB2Q08289 660 aaPredicted RBP7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 SNCBQ16143 134 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 MAJINQ3KP22 176 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 HSP90AA4PQ58FG1 418 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 TMEM164Q5U3C3 297 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 CCDC62Q6P9F0 684 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 TUBA3EQ6PEY2 450 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 CNGA4Q8IV77 575 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 OR6C4Q8NGE1 309 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 PANX2Q96RD6 677 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 EXOC7Q9UPT5 735 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 TMEM5Q9Y2B1 443 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 INPP5FQ9Y2H2 1132 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 PCDHB13Q9Y5F0 798 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 ANKRD36CQ5JPF3 1778 aa7.05□□□□□ -1.28
TM9SF4-202ENST00000398022 SEC24DO94855 1032 aaPredicted RBP7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 STARD3NLO95772 234 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 DNAJB1P25685 340 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 ACADSBP45954 432 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 ADKP55263 362 aaKnown RBP7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 TRAP1Q12931 704 aaKnown RBP7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 PRKG1Q13976 671 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 ALX1Q15699 326 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 TRIM50Q86XT4 487 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 TBC1D10CQ8IV04 446 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 ZBTB38Q8NAP3 1195 aaPredicted RBP7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 SPATA5Q8NB90 893 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 LRRN4CLQ8ND94 238 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 SLC22A8Q8TCC7 542 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 CCDC51Q96ER9 411 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 HSD3B7Q9H2F3 369 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 ZNF532Q9HCE3 1301 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 IQANK1A0A1B0GTG1 560 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 HTR3EA5X5Y0 456 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 E9PMD0 336 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 HAT1O14929 419 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 ACTN4O43707 911 aaKnown RBP7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 MT-ND3P03897 115 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 MMP1P03956 469 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 CDK4P11802 303 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 TBX2Q13207 712 aaPredicted RBP7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 SCARF1Q14162 830 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 KARSQ15046 597 aaKnown RBP7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 STK11Q15831 433 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 IGSF11Q5DX21 431 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 NEPROQ6NW34 567 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 CYB5R4Q7L1T6 521 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 LPCAT2Q7L5N7 544 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 GALNT15Q8N3T1 639 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 BCL7CQ8WUZ0 217 aaPredicted RBP7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 ZKSCAN4Q969J2 545 aaPredicted RBP7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 FAM167AQ96KS9 214 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 SRPK1Q96SB4 655 aaKnown RBP7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 PYM1Q9BRP8 204 aaKnown RBP7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 NTPCRQ9BSD7 190 aaKnown RBP7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 UBAC1Q9BSL1 405 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 SPZ1Q9BXG8 430 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 ALG13Q9NP73 1137 aaKnown RBP7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 SERTAD1Q9UHV2 236 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 CFL2Q9Y281 166 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 UBN2Q6ZU65 1347 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 TRIM75PA6NK02 468 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 J3KRW8 73 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 TSC22D2O75157 780 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 SEC31AO94979 1220 aaKnown RBP7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 CCDC166P0CW27 439 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 PDE6AP16499 860 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 POLR2EP19388 210 aaKnown RBP7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 SCNN1AP37088 669 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 MCAMP43121 646 aa7.04□□□□□ -1.28
TM9SF4-202ENST00000398022 MAN2A2P49641 1150 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms