RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 FAM213AQ9BRX8 229 aa21.2■□□□□ 0.98
PDLIM2-205ENST00000397761 CDHR5Q9HBB8 845 aa21.2■□□□□ 0.98
PDLIM2-205ENST00000397761 ANKFY1Q9P2R3 1169 aa21.2■□□□□ 0.98
PDLIM2-205ENST00000397761 TSPAN1O60635 241 aa21.2■□□□□ 0.98
PDLIM2-205ENST00000397761 ARF4P18085 180 aaPredicted RBP21.2■□□□□ 0.98
PDLIM2-205ENST00000397761 SFPQP23246 707 aaKnown RBP eCLIP21.2■□□□□ 0.98
PDLIM2-205ENST00000397761 EIF4BP23588 611 aaKnown RBP21.2■□□□□ 0.98
PDLIM2-205ENST00000397761 FMO5P49326 533 aa21.2■□□□□ 0.98
PDLIM2-205ENST00000397761 DLG4P78352 724 aa21.2■□□□□ 0.98
PDLIM2-205ENST00000397761 CLDN10P78369 228 aa21.2■□□□□ 0.98
PDLIM2-205ENST00000397761 TMEM62Q0P6H9 643 aa21.2■□□□□ 0.98
PDLIM2-205ENST00000397761 NOLC1Q14978 699 aaKnown RBP eCLIP21.2■□□□□ 0.98
PDLIM2-205ENST00000397761 TCERG1LQ5VWI1 586 aa21.2■□□□□ 0.98
PDLIM2-205ENST00000397761 DPY19L2P1Q6NXN4 242 aa21.2■□□□□ 0.98
PDLIM2-205ENST00000397761 CTU1Q7Z7A3 348 aaKnown RBP21.2■□□□□ 0.98
PDLIM2-205ENST00000397761 PPFIBP1Q86W92 1011 aa21.2■□□□□ 0.98
PDLIM2-205ENST00000397761 GLT1D1Q96MS3 346 aa21.2■□□□□ 0.98
PDLIM2-205ENST00000397761 SCLT1Q96NL6 688 aa21.2■□□□□ 0.98
PDLIM2-205ENST00000397761 A0A1B0GUA9 196 aa21.19■□□□□ 0.98
PDLIM2-205ENST00000397761 A0A1W2PQ45 241 aaPredicted RBP21.19■□□□□ 0.98
PDLIM2-205ENST00000397761 A0A1W2PQJ5 194 aa21.19■□□□□ 0.98
PDLIM2-205ENST00000397761 A0A1W2PQY0 241 aa21.19■□□□□ 0.98
PDLIM2-205ENST00000397761 OGTO15294 1046 aa21.19■□□□□ 0.98
PDLIM2-205ENST00000397761 P4HA2O15460 535 aa21.19■□□□□ 0.98
PDLIM2-205ENST00000397761 CSDE1O75534 798 aaKnown RBP21.19■□□□□ 0.98
PDLIM2-205ENST00000397761 CAPN15O75808 1086 aa21.19■□□□□ 0.98
PDLIM2-205ENST00000397761 MYCNP04198 464 aaPredicted RBP21.19■□□□□ 0.98
PDLIM2-205ENST00000397761 TRIM49P0CI25 452 aa21.19■□□□□ 0.98
PDLIM2-205ENST00000397761 TRIM49CP0CI26 452 aa21.19■□□□□ 0.98
PDLIM2-205ENST00000397761 KLK7P49862 253 aa21.19■□□□□ 0.98
PDLIM2-205ENST00000397761 FXR1P51114 621 aaKnown RBP eCLIP21.19■□□□□ 0.98
PDLIM2-205ENST00000397761 CRYBB1P53674 252 aaPredicted RBP21.19■□□□□ 0.98
PDLIM2-205ENST00000397761 PSMD6Q15008 389 aa21.19■□□□□ 0.98
PDLIM2-205ENST00000397761 SNX17Q15036 470 aa21.19■□□□□ 0.98
PDLIM2-205ENST00000397761 EEF1DP3Q658K8 133 aa21.19■□□□□ 0.98
PDLIM2-205ENST00000397761 USP37Q86T82 979 aa21.19■□□□□ 0.98
PDLIM2-205ENST00000397761 EDEM3Q9BZQ6 932 aa21.19■□□□□ 0.98
PDLIM2-205ENST00000397761 PDZD7Q9H5P4 517 aa21.19■□□□□ 0.98
PDLIM2-205ENST00000397761 CAPN11Q9UMQ6 739 aa21.19■□□□□ 0.98
PDLIM2-205ENST00000397761 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.19■□□□□ 0.98
PDLIM2-205ENST00000397761 AKR1B15C9JRZ8 316 aaPredicted RBP21.18■□□□□ 0.98
PDLIM2-205ENST00000397761 RNF225M0QZC1 329 aaPredicted RBP21.18■□□□□ 0.98
PDLIM2-205ENST00000397761 N4BP1O75113 896 aaKnown RBP21.18■□□□□ 0.98
PDLIM2-205ENST00000397761 MFAP3LO75121 409 aa21.18■□□□□ 0.98
PDLIM2-205ENST00000397761 CASP14P31944 242 aa21.18■□□□□ 0.98
PDLIM2-205ENST00000397761 MRPS6P82932 125 aaKnown RBP21.18■□□□□ 0.98
PDLIM2-205ENST00000397761 PPP3CAQ08209 521 aa21.18■□□□□ 0.98
PDLIM2-205ENST00000397761 FAM47CQ5HY64 1035 aa21.18■□□□□ 0.98
PDLIM2-205ENST00000397761 CNGA4Q8IV77 575 aa21.18■□□□□ 0.98
PDLIM2-205ENST00000397761 OSMRQ99650 979 aa21.18■□□□□ 0.98
PDLIM2-205ENST00000397761 SEZ6LQ9BYH1 1024 aa21.18■□□□□ 0.98
PDLIM2-205ENST00000397761 CELF4Q9BZC1 486 aaKnown RBP21.18■□□□□ 0.98
PDLIM2-205ENST00000397761 CDT1Q9H211 546 aa21.18■□□□□ 0.98
PDLIM2-205ENST00000397761 TMX1Q9H3N1 280 aa21.18■□□□□ 0.98
PDLIM2-205ENST00000397761 PLCB1Q9NQ66 1216 aa21.18■□□□□ 0.98
PDLIM2-205ENST00000397761 OGDHLQ9ULD0 1010 aa21.18■□□□□ 0.98
PDLIM2-205ENST00000397761 TTC26A0AVF1 554 aa21.17■□□□□ 0.98
PDLIM2-205ENST00000397761 DNM1LO00429 736 aa21.17■□□□□ 0.98
PDLIM2-205ENST00000397761 STX10O60499 249 aa21.17■□□□□ 0.98
PDLIM2-205ENST00000397761 ERLIN2O94905 339 aa21.17■□□□□ 0.98
PDLIM2-205ENST00000397761 TPM1P09493 284 aa21.17■□□□□ 0.98
PDLIM2-205ENST00000397761 MCF2P10911 925 aa21.17■□□□□ 0.98
PDLIM2-205ENST00000397761 CCL5P13501 91 aa21.17■□□□□ 0.98
PDLIM2-205ENST00000397761 TRIM21P19474 475 aaKnown RBP21.17■□□□□ 0.98
PDLIM2-205ENST00000397761 FECHP22830 423 aa21.17■□□□□ 0.98
PDLIM2-205ENST00000397761 GTF2H1P32780 548 aa21.17■□□□□ 0.98
PDLIM2-205ENST00000397761 ACOT2P49753 483 aa21.17■□□□□ 0.98
PDLIM2-205ENST00000397761 POU5F1Q01860 360 aaKnown RBP21.17■□□□□ 0.98
PDLIM2-205ENST00000397761 MTFR1Q15390 333 aa21.17■□□□□ 0.98
PDLIM2-205ENST00000397761 PTGISQ16647 500 aa21.17■□□□□ 0.98
PDLIM2-205ENST00000397761 ZNF568Q3ZCX4 644 aa21.17■□□□□ 0.98
PDLIM2-205ENST00000397761 CBWD6Q4V339 395 aa21.17■□□□□ 0.98
PDLIM2-205ENST00000397761 CBWD3Q5JTY5 395 aa21.17■□□□□ 0.98
PDLIM2-205ENST00000397761 CBWD5Q5RIA9 395 aa21.17■□□□□ 0.98
PDLIM2-205ENST00000397761 ZBTB41Q5SVQ8 909 aa21.17■□□□□ 0.98
PDLIM2-205ENST00000397761 GBP6Q6ZN66 633 aa21.17■□□□□ 0.98
PDLIM2-205ENST00000397761 RSPH3Q86UC2 560 aa21.17■□□□□ 0.98
PDLIM2-205ENST00000397761 BRSK2Q8IWQ3 736 aa21.17■□□□□ 0.98
PDLIM2-205ENST00000397761 TMEM40Q8WWA1 233 aa21.17■□□□□ 0.98
PDLIM2-205ENST00000397761 WNT8BQ93098 351 aa21.17■□□□□ 0.98
PDLIM2-205ENST00000397761 CCDC51Q96ER9 411 aa21.17■□□□□ 0.98
PDLIM2-205ENST00000397761 ZNF830Q96NB3 372 aaPredicted RBP21.17■□□□□ 0.98
PDLIM2-205ENST00000397761 PANX2Q96RD6 677 aa21.17■□□□□ 0.98
PDLIM2-205ENST00000397761 TCHPQ9BT92 498 aa21.17■□□□□ 0.98
PDLIM2-205ENST00000397761 CPSF3Q9UKF6 684 aaKnown RBP21.17■□□□□ 0.98
PDLIM2-205ENST00000397761 LRRIQ3A6PVS8 624 aaPredicted RBP21.16■□□□□ 0.98
PDLIM2-205ENST00000397761 NOL4O94818 638 aa21.16■□□□□ 0.98
PDLIM2-205ENST00000397761 PON1P27169 355 aa21.16■□□□□ 0.98
PDLIM2-205ENST00000397761 HOXA11P31270 313 aaPredicted RBP21.16■□□□□ 0.98
PDLIM2-205ENST00000397761 MATR3P43243 847 aaKnown RBP eCLIP21.16■□□□□ 0.98
PDLIM2-205ENST00000397761 ADKP55263 362 aaKnown RBP21.16■□□□□ 0.98
PDLIM2-205ENST00000397761 CCZ1BP86790 482 aa21.16■□□□□ 0.98
PDLIM2-205ENST00000397761 CCZ1P86791 482 aaPredicted RBP21.16■□□□□ 0.98
PDLIM2-205ENST00000397761 LRMPQ12912 555 aa21.16■□□□□ 0.98
PDLIM2-205ENST00000397761 PTK7Q13308 1070 aa21.16■□□□□ 0.98
PDLIM2-205ENST00000397761 EXOC3L4Q17RC7 722 aa21.16■□□□□ 0.98
PDLIM2-205ENST00000397761 FBXO46Q6PJ61 603 aaPredicted RBP21.16■□□□□ 0.98
PDLIM2-205ENST00000397761 CRACR2AQ9BSW2 395 aa21.16■□□□□ 0.98
PDLIM2-205ENST00000397761 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.16■□□□□ 0.98
PDLIM2-205ENST00000397761 ZKSCAN5Q9Y2L8 839 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms