RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 TBX20Q9UMR3 447 aa16.45■□□□□ 0.22
LSS-202ENST00000397728 SYNPO2Q9UMS6 1093 aa16.45■□□□□ 0.22
LSS-202ENST00000397728 ABCC6O95255 1503 aa16.45■□□□□ 0.22
LSS-202ENST00000397728 A0A087WZ62 844 aa16.45■□□□□ 0.22
LSS-202ENST00000397728 B3GAT3O94766 335 aa16.45■□□□□ 0.22
LSS-202ENST00000397728 CLTAP09496 248 aa16.45■□□□□ 0.22
LSS-202ENST00000397728 LCP1P13796 627 aa16.45■□□□□ 0.22
LSS-202ENST00000397728 NME3Q13232 169 aa16.45■□□□□ 0.22
LSS-202ENST00000397728 SGSM1Q2NKQ1 1148 aa16.45■□□□□ 0.22
LSS-202ENST00000397728 Q4G0T1 1027 aa16.45■□□□□ 0.22
LSS-202ENST00000397728 DENND2CQ68D51 928 aa16.45■□□□□ 0.22
LSS-202ENST00000397728 ARHGEF18Q6ZSZ5 1173 aa16.45■□□□□ 0.22
LSS-202ENST00000397728 UHMK1Q8TAS1 419 aaKnown RBP16.45■□□□□ 0.22
LSS-202ENST00000397728 CAPNS2Q96L46 248 aa16.45■□□□□ 0.22
LSS-202ENST00000397728 FDXACB1Q9BRP7 624 aaPredicted RBP16.45■□□□□ 0.22
LSS-202ENST00000397728 RANBP17Q9H2T7 1088 aaKnown RBP16.45■□□□□ 0.22
LSS-202ENST00000397728 SRGAP2BP0DMP2 458 aa16.45■□□□□ 0.22
LSS-202ENST00000397728 YWHAGP61981 247 aaKnown RBP eCLIP16.45■□□□□ 0.22
LSS-202ENST00000397728 YME1L1Q96TA2 773 aa16.45■□□□□ 0.22
LSS-202ENST00000397728 SEPT5Q99719 369 aaPredicted RBP16.45■□□□□ 0.22
LSS-202ENST00000397728 VPS18Q9P253 973 aa16.45■□□□□ 0.22
LSS-202ENST00000397728 ANAPC5Q9UJX4 755 aa16.45■□□□□ 0.22
LSS-202ENST00000397728 AFG3L2Q9Y4W6 797 aa16.45■□□□□ 0.22
LSS-202ENST00000397728 FAM86B1E9PN63 330 aa16.44■□□□□ 0.22
LSS-202ENST00000397728 CYP26A1O43174 497 aa16.44■□□□□ 0.22
LSS-202ENST00000397728 PPFIA4O75335 1185 aa16.44■□□□□ 0.22
LSS-202ENST00000397728 IL18RAPO95256 599 aa16.44■□□□□ 0.22
LSS-202ENST00000397728 FAM86B2P0C5J1 330 aa16.44■□□□□ 0.22
LSS-202ENST00000397728 KRT71Q3SY84 523 aa16.44■□□□□ 0.22
LSS-202ENST00000397728 CC2D1AQ6P1N0 951 aaPredicted RBP16.44■□□□□ 0.22
LSS-202ENST00000397728 TMEM39AQ9NV64 488 aa16.44■□□□□ 0.22
LSS-202ENST00000397728 PIK3R2O00459 728 aa16.44■□□□□ 0.22
LSS-202ENST00000397728 SLC16A3O15427 465 aaKnown RBP16.44■□□□□ 0.22
LSS-202ENST00000397728 TREML2Q5T2D2 321 aa16.44■□□□□ 0.22
LSS-202ENST00000397728 ASNSD1Q9NWL6 643 aa16.44■□□□□ 0.22
LSS-202ENST00000397728 SPDYE5A6NIY4 337 aa16.44■□□□□ 0.22
LSS-202ENST00000397728 KRT10P13645 584 aa16.44■□□□□ 0.22
LSS-202ENST00000397728 GPC5P78333 572 aa16.44■□□□□ 0.22
LSS-202ENST00000397728 BASP1P80723 227 aaKnown RBP16.44■□□□□ 0.22
LSS-202ENST00000397728 GRIK4Q16099 956 aa16.44■□□□□ 0.22
LSS-202ENST00000397728 GPR142Q7Z601 462 aa16.44■□□□□ 0.22
LSS-202ENST00000397728 SRGAP1Q7Z6B7 1085 aa16.44■□□□□ 0.22
LSS-202ENST00000397728 DNAJB3Q8WWF6 145 aa16.44■□□□□ 0.22
LSS-202ENST00000397728 PPP1R13BQ96KQ4 1090 aa16.44■□□□□ 0.22
LSS-202ENST00000397728 AGXT2Q9BYV1 514 aa16.44■□□□□ 0.22
LSS-202ENST00000397728 DONSONQ9NYP3 566 aa16.44■□□□□ 0.22
LSS-202ENST00000397728 SKIP12755 728 aa16.44■□□□□ 0.22
LSS-202ENST00000397728 PLCB4Q15147 1175 aa16.44■□□□□ 0.22
LSS-202ENST00000397728 IQSEC1Q6DN90 963 aa16.44■□□□□ 0.22
LSS-202ENST00000397728 TRPC7Q9HCX4 862 aa16.44■□□□□ 0.22
LSS-202ENST00000397728 AAASQ9NRG9 546 aa16.44■□□□□ 0.22
LSS-202ENST00000397728 TTC26A0AVF1 554 aa16.43■□□□□ 0.22
LSS-202ENST00000397728 PGRMC1O00264 195 aaKnown RBP16.43■□□□□ 0.22
LSS-202ENST00000397728 CREB3O43889 395 aa16.43■□□□□ 0.22
LSS-202ENST00000397728 PGK1P00558 417 aa16.43■□□□□ 0.22
LSS-202ENST00000397728 FMO5P49326 533 aa16.43■□□□□ 0.22
LSS-202ENST00000397728 TOB1P50616 345 aaPredicted RBP16.43■□□□□ 0.22
LSS-202ENST00000397728 TMEM132BQ14DG7 1078 aa16.43■□□□□ 0.22
LSS-202ENST00000397728 TRAPPC12Q8WVT3 735 aa16.43■□□□□ 0.22
LSS-202ENST00000397728 ATP2A3Q93084 1043 aa16.43■□□□□ 0.22
LSS-202ENST00000397728 CYP39A1Q9NYL5 469 aa16.43■□□□□ 0.22
LSS-202ENST00000397728 ZBED1O96006 694 aa16.43■□□□□ 0.22
LSS-202ENST00000397728 FTLP02792 175 aaPredicted RBP16.43■□□□□ 0.22
LSS-202ENST00000397728 NPTX2P47972 431 aa16.43■□□□□ 0.22
LSS-202ENST00000397728 TSTA3Q13630 321 aaPredicted RBP16.43■□□□□ 0.22
LSS-202ENST00000397728 SHROOM1Q2M3G4 852 aaPredicted RBP16.43■□□□□ 0.22
LSS-202ENST00000397728 EDRF1Q3B7T1 1238 aa16.43■□□□□ 0.22
LSS-202ENST00000397728 MGAT5BQ3V5L5 792 aa16.43■□□□□ 0.22
LSS-202ENST00000397728 CXCL17Q6UXB2 119 aa16.43■□□□□ 0.22
LSS-202ENST00000397728 TSC1Q92574 1164 aa16.43■□□□□ 0.22
LSS-202ENST00000397728 SENP6Q9GZR1 1112 aaPredicted RBP16.43■□□□□ 0.22
LSS-202ENST00000397728 ABHD10Q9NUJ1 306 aa16.43■□□□□ 0.22
LSS-202ENST00000397728 SLC15A5A6NIM6 579 aa16.43■□□□□ 0.22
LSS-202ENST00000397728 EIF3DO15371 548 aaKnown RBP eCLIP16.43■□□□□ 0.22
LSS-202ENST00000397728 APOEP02649 317 aa16.43■□□□□ 0.22
LSS-202ENST00000397728 PHBP35232 272 aa16.43■□□□□ 0.22
LSS-202ENST00000397728 NAMPTP43490 491 aa16.43■□□□□ 0.22
LSS-202ENST00000397728 SOX10P56693 466 aa16.43■□□□□ 0.22
LSS-202ENST00000397728 C4orf19Q8IY42 314 aa16.43■□□□□ 0.22
LSS-202ENST00000397728 ZNF512Q96ME7 567 aaPredicted RBP16.43■□□□□ 0.22
LSS-202ENST00000397728 SPON2Q9BUD6 331 aa16.43■□□□□ 0.22
LSS-202ENST00000397728 FAM49BQ9NUQ9 324 aa16.43■□□□□ 0.22
LSS-202ENST00000397728 IPO11Q9UI26 975 aaKnown RBP16.43■□□□□ 0.22
LSS-202ENST00000397728 EFCAB8A8MWE9 144 aa16.43■□□□□ 0.22
LSS-202ENST00000397728 EXTL3O43909 919 aa16.43■□□□□ 0.22
LSS-202ENST00000397728 RALAP11233 206 aa16.43■□□□□ 0.22
LSS-202ENST00000397728 ATP11AP98196 1134 aa16.43■□□□□ 0.22
LSS-202ENST00000397728 GFPT1Q06210 699 aaPredicted RBP16.43■□□□□ 0.22
LSS-202ENST00000397728 MAP2K5Q13163 448 aa16.43■□□□□ 0.22
LSS-202ENST00000397728 MFSD10Q14728 455 aa16.43■□□□□ 0.22
LSS-202ENST00000397728 PURBQ96QR8 312 aaKnown RBP16.43■□□□□ 0.22
LSS-202ENST00000397728 HLA-DRAP01903 254 aa16.42■□□□□ 0.22
LSS-202ENST00000397728 PCSK1P29120 753 aa16.42■□□□□ 0.22
LSS-202ENST00000397728 RGS7P49802 495 aa16.42■□□□□ 0.22
LSS-202ENST00000397728 RWDD2BP57060 319 aa16.42■□□□□ 0.22
LSS-202ENST00000397728 SV2CQ496J9 727 aa16.42■□□□□ 0.22
LSS-202ENST00000397728 NFRKBQ6P4R8 1299 aa16.42■□□□□ 0.22
LSS-202ENST00000397728 YAF2Q8IY57 180 aa16.42■□□□□ 0.22
LSS-202ENST00000397728 REPS2Q8NFH8 660 aa16.42■□□□□ 0.22
LSS-202ENST00000397728 SENP7Q9BQF6 1050 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms