RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 ANKRD13AQ8IZ07 590 aa5.54□□□□□ -1.52
CMC1-202ENST00000396610 DPF2Q92785 391 aa5.54□□□□□ -1.52
CMC1-202ENST00000396610 CDC5LQ99459 802 aaKnown RBP5.54□□□□□ -1.52
CMC1-202ENST00000396610 EPC1Q9H2F5 836 aa5.54□□□□□ -1.52
CMC1-202ENST00000396610 HECAQ9UBI9 543 aaPredicted RBP5.54□□□□□ -1.52
CMC1-202ENST00000396610 SERPINB13Q9UIV8 391 aa5.54□□□□□ -1.52
CMC1-202ENST00000396610 SPEF1Q9Y4P9 236 aa5.54□□□□□ -1.52
CMC1-202ENST00000396610 ZMYM3Q14202 1370 aa5.54□□□□□ -1.52
CMC1-202ENST00000396610 WNT10BO00744 389 aa5.53□□□□□ -1.52
CMC1-202ENST00000396610 CRHR1P34998 444 aa5.53□□□□□ -1.52
CMC1-202ENST00000396610 SREBF1P36956 1147 aa5.53□□□□□ -1.52
CMC1-202ENST00000396610 MCL1Q07820 350 aa5.53□□□□□ -1.52
CMC1-202ENST00000396610 TTF1Q15361 905 aaPredicted RBP5.53□□□□□ -1.52
CMC1-202ENST00000396610 CDSNQ15517 529 aa5.53□□□□□ -1.52
CMC1-202ENST00000396610 ODR4Q5SWX8 454 aa5.53□□□□□ -1.52
CMC1-202ENST00000396610 SPTY2D1Q68D10 685 aaPredicted RBP5.53□□□□□ -1.52
CMC1-202ENST00000396610 ELOA2Q8IYF1 753 aaPredicted RBP5.53□□□□□ -1.52
CMC1-202ENST00000396610 THEMISQ8N1K5 641 aaPredicted RBP5.53□□□□□ -1.52
CMC1-202ENST00000396610 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.53□□□□□ -1.52
CMC1-202ENST00000396610 OR7D4Q8NG98 312 aa5.53□□□□□ -1.52
CMC1-202ENST00000396610 DVL3Q92997 716 aaPredicted RBP5.53□□□□□ -1.52
CMC1-202ENST00000396610 HOOK2Q96ED9 719 aa5.53□□□□□ -1.52
CMC1-202ENST00000396610 CEP95Q96GE4 821 aa5.53□□□□□ -1.52
CMC1-202ENST00000396610 FAM89AQ96GI7 184 aa5.53□□□□□ -1.52
CMC1-202ENST00000396610 UHRF1Q96T88 793 aaPredicted RBP5.53□□□□□ -1.52
CMC1-202ENST00000396610 MPHOSPH9Q99550 1183 aa5.53□□□□□ -1.52
CMC1-202ENST00000396610 PDCD2LQ9BRP1 358 aa5.53□□□□□ -1.52
CMC1-202ENST00000396610 LDAHQ9H6V9 325 aa5.53□□□□□ -1.52
CMC1-202ENST00000396610 BCO1Q9HAY6 547 aa5.53□□□□□ -1.52
CMC1-202ENST00000396610 AASDHPPTQ9NRN7 309 aa5.53□□□□□ -1.52
CMC1-202ENST00000396610 LUC7L2Q9Y383 392 aaKnown RBP5.53□□□□□ -1.52
CMC1-202ENST00000396610 FAM171A2A8MVW0 826 aa5.52□□□□□ -1.53
CMC1-202ENST00000396610 MUSKO15146 869 aa5.52□□□□□ -1.53
CMC1-202ENST00000396610 ENDOD1O94919 500 aa5.52□□□□□ -1.53
CMC1-202ENST00000396610 SNUPNO95149 360 aaKnown RBP5.52□□□□□ -1.53
CMC1-202ENST00000396610 GASTP01350 101 aa5.52□□□□□ -1.53
CMC1-202ENST00000396610 GNAT2P19087 354 aa5.52□□□□□ -1.53
CMC1-202ENST00000396610 RECQLP46063 649 aaPredicted RBP5.52□□□□□ -1.53
CMC1-202ENST00000396610 SLC6A9P48067 706 aa5.52□□□□□ -1.53
CMC1-202ENST00000396610 SLC16A1P53985 500 aa5.52□□□□□ -1.53
CMC1-202ENST00000396610 KRTAP10-2P60368 255 aa5.52□□□□□ -1.53
CMC1-202ENST00000396610 APBA1Q02410 837 aa5.52□□□□□ -1.53
CMC1-202ENST00000396610 HHEXQ03014 270 aa5.52□□□□□ -1.53
CMC1-202ENST00000396610 C3orf36Q3SXR2 165 aa5.52□□□□□ -1.53
CMC1-202ENST00000396610 MFSD14BQ5SR56 506 aa5.52□□□□□ -1.53
CMC1-202ENST00000396610 TMEM240Q5SV17 173 aa5.52□□□□□ -1.53
CMC1-202ENST00000396610 MFSD5Q6N075 450 aa5.52□□□□□ -1.53
CMC1-202ENST00000396610 FAM180AQ6UWF9 173 aa5.52□□□□□ -1.53
CMC1-202ENST00000396610 SGMS1Q86VZ5 419 aa5.52□□□□□ -1.53
CMC1-202ENST00000396610 XYLT1Q86Y38 959 aa5.52□□□□□ -1.53
CMC1-202ENST00000396610 CMTR2Q8IYT2 770 aaKnown RBP5.52□□□□□ -1.53
CMC1-202ENST00000396610 PQLC1Q8N2U9 271 aa5.52□□□□□ -1.53
CMC1-202ENST00000396610 EDAQ92838 391 aa5.52□□□□□ -1.53
CMC1-202ENST00000396610 RAB24Q969Q5 203 aa5.52□□□□□ -1.53
CMC1-202ENST00000396610 LSM14BQ9BX40 385 aaKnown RBP5.52□□□□□ -1.53
CMC1-202ENST00000396610 CPEB1Q9BZB8 566 aaKnown RBP5.52□□□□□ -1.53
CMC1-202ENST00000396610 LANCL2Q9NS86 450 aa5.52□□□□□ -1.53
CMC1-202ENST00000396610 INTUQ9ULD6 942 aa5.52□□□□□ -1.53
CMC1-202ENST00000396610 SIK3Q9Y2K2 1263 aa5.52□□□□□ -1.53
CMC1-202ENST00000396610 THRAP3Q9Y2W1 955 aaKnown RBP5.52□□□□□ -1.53
CMC1-202ENST00000396610 HOXA3O43365 443 aaPredicted RBP5.51□□□□□ -1.53
CMC1-202ENST00000396610 PTPN7P35236 360 aa5.51□□□□□ -1.53
CMC1-202ENST00000396610 PER3P56645 1201 aa5.51□□□□□ -1.53
CMC1-202ENST00000396610 PIN1Q13526 163 aaPredicted RBP5.51□□□□□ -1.53
CMC1-202ENST00000396610 PRKD1Q15139 912 aaPredicted RBP5.51□□□□□ -1.53
CMC1-202ENST00000396610 UAP1L1Q3KQV9 507 aa5.51□□□□□ -1.53
CMC1-202ENST00000396610 SPDYAQ5MJ70 313 aa5.51□□□□□ -1.53
CMC1-202ENST00000396610 GJC2Q5T442 439 aaPredicted RBP5.51□□□□□ -1.53
CMC1-202ENST00000396610 Q6ZRM9 215 aa5.51□□□□□ -1.53
CMC1-202ENST00000396610 APBB1IPQ7Z5R6 666 aaPredicted RBP5.51□□□□□ -1.53
CMC1-202ENST00000396610 RAVER1Q8IY67 606 aaKnown RBP5.51□□□□□ -1.53
CMC1-202ENST00000396610 ANKRD35Q8N283 1001 aa5.51□□□□□ -1.53
CMC1-202ENST00000396610 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.51□□□□□ -1.53
CMC1-202ENST00000396610 ST8SIA2Q92186 375 aa5.51□□□□□ -1.53
CMC1-202ENST00000396610 C1QTNF3Q9BXJ4 246 aa5.51□□□□□ -1.53
CMC1-202ENST00000396610 SAP30BPQ9UHR5 308 aaKnown RBP5.51□□□□□ -1.53
CMC1-202ENST00000396610 LIMCH1Q9UPQ0 1083 aa5.51□□□□□ -1.53
CMC1-202ENST00000396610 CCDC154A6NI56 674 aa5.5□□□□□ -1.53
CMC1-202ENST00000396610 HTRA2O43464 458 aaPredicted RBP5.5□□□□□ -1.53
CMC1-202ENST00000396610 IPO13O94829 963 aaKnown RBP5.5□□□□□ -1.53
CMC1-202ENST00000396610 S100BP04271 92 aaPredicted RBP5.5□□□□□ -1.53
CMC1-202ENST00000396610 HK1P19367 917 aa5.5□□□□□ -1.53
CMC1-202ENST00000396610 FPR1P21462 350 aa5.5□□□□□ -1.53
CMC1-202ENST00000396610 EDNRBP24530 442 aa5.5□□□□□ -1.53
CMC1-202ENST00000396610 GUCY1A2P33402 732 aa5.5□□□□□ -1.53
CMC1-202ENST00000396610 WASP42768 502 aa5.5□□□□□ -1.53
CMC1-202ENST00000396610 FLT3LGP49771 235 aa5.5□□□□□ -1.53
CMC1-202ENST00000396610 ADKP55263 362 aaKnown RBP5.5□□□□□ -1.53
CMC1-202ENST00000396610 C1QL3Q5VWW1 255 aa5.5□□□□□ -1.53
CMC1-202ENST00000396610 ANKS6Q68DC2 871 aa5.5□□□□□ -1.53
CMC1-202ENST00000396610 PDZD4Q76G19 769 aaPredicted RBP5.5□□□□□ -1.53
CMC1-202ENST00000396610 MIGA2Q7L4E1 593 aa5.5□□□□□ -1.53
CMC1-202ENST00000396610 ZNF572Q7Z3I7 529 aaPredicted RBP5.5□□□□□ -1.53
CMC1-202ENST00000396610 CPA6Q8N4T0 437 aa5.5□□□□□ -1.53
CMC1-202ENST00000396610 MDGA1Q8NFP4 955 aa5.5□□□□□ -1.53
CMC1-202ENST00000396610 COA7Q96BR5 231 aa5.5□□□□□ -1.53
CMC1-202ENST00000396610 MIEF2Q96C03 454 aa5.5□□□□□ -1.53
CMC1-202ENST00000396610 PGBD4Q96DM1 585 aa5.5□□□□□ -1.53
CMC1-202ENST00000396610 C7orf25Q9BPX7 421 aa5.5□□□□□ -1.53
CMC1-202ENST00000396610 CPPED1Q9BRF8 314 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms