RNA–Protein interactions for RNA: ENST00000393196.7

NME1-203, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-203ENST00000393196 SPRED2Q7Z698 418 aa20.54■□□□□ 0.88
NME1-203ENST00000393196 THNSL1Q8IYQ7 743 aa20.54■□□□□ 0.88
NME1-203ENST00000393196 PPP2R3CQ969Q6 453 aa20.54■□□□□ 0.88
NME1-203ENST00000393196 RPS6KC1Q96S38 1066 aa20.54■□□□□ 0.88
NME1-203ENST00000393196 CCDC94Q9BW85 323 aaPredicted RBP20.54■□□□□ 0.88
NME1-203ENST00000393196 TARS2Q9BW92 718 aaKnown RBP20.54■□□□□ 0.88
NME1-203ENST00000393196 TOPORSQ9NS56 1045 aaPredicted RBP20.54■□□□□ 0.88
NME1-203ENST00000393196 TBC1D13Q9NVG8 400 aa20.54■□□□□ 0.88
NME1-203ENST00000393196 SPG21Q9NZD8 308 aa20.54■□□□□ 0.88
NME1-203ENST00000393196 CHMP5Q9NZZ3 219 aa20.54■□□□□ 0.88
NME1-203ENST00000393196 TBX20Q9UMR3 447 aa20.54■□□□□ 0.88
NME1-203ENST00000393196 LZTS1Q9Y250 596 aa20.54■□□□□ 0.88
NME1-203ENST00000393196 PCDHB13Q9Y5F0 798 aa20.54■□□□□ 0.88
NME1-203ENST00000393196 MTCH2Q9Y6C9 303 aa20.54■□□□□ 0.88
NME1-203ENST00000393196 FAM237AA0A1B0GTK4 181 aa20.53■□□□□ 0.88
NME1-203ENST00000393196 FRMD3A2A2Y4 597 aa20.53■□□□□ 0.88
NME1-203ENST00000393196 ARL5CA6NH57 179 aa20.53■□□□□ 0.88
NME1-203ENST00000393196 LPXNO60711 386 aa20.53■□□□□ 0.88
NME1-203ENST00000393196 PIGRP01833 764 aa20.53■□□□□ 0.88
NME1-203ENST00000393196 LIG4P49917 911 aa20.53■□□□□ 0.88
NME1-203ENST00000393196 YARSP54577 528 aaKnown RBP20.53■□□□□ 0.88
NME1-203ENST00000393196 GTF2BQ00403 316 aa20.53■□□□□ 0.88
NME1-203ENST00000393196 LONRF3Q496Y0 759 aa20.53■□□□□ 0.88
NME1-203ENST00000393196 HERC4Q5GLZ8 1057 aaPredicted RBP20.53■□□□□ 0.88
NME1-203ENST00000393196 PDE12Q6L8Q7 609 aaKnown RBP20.53■□□□□ 0.88
NME1-203ENST00000393196 CDR2LQ86X02 465 aaPredicted RBP20.53■□□□□ 0.88
NME1-203ENST00000393196 SFR1Q86XK3 245 aa20.53■□□□□ 0.88
NME1-203ENST00000393196 MAP4K3Q8IVH8 894 aa20.53■□□□□ 0.88
NME1-203ENST00000393196 MRPS27Q92552 414 aaKnown RBP20.53■□□□□ 0.88
NME1-203ENST00000393196 C7orf25Q9BPX7 421 aa20.53■□□□□ 0.88
NME1-203ENST00000393196 TMEM175Q9BSA9 504 aa20.53■□□□□ 0.88
NME1-203ENST00000393196 APOL6Q9BWW8 343 aa20.53■□□□□ 0.88
NME1-203ENST00000393196 TRIM9Q9C026 710 aa20.53■□□□□ 0.88
NME1-203ENST00000393196 MRPL44Q9H9J2 332 aaKnown RBP20.53■□□□□ 0.88
NME1-203ENST00000393196 PTPRHQ9HD43 1115 aa20.53■□□□□ 0.88
NME1-203ENST00000393196 PANK4Q9NVE7 773 aa20.53■□□□□ 0.88
NME1-203ENST00000393196 PARP2Q9UGN5 583 aa20.53■□□□□ 0.88
NME1-203ENST00000393196 PLAGL2Q9UPG8 496 aa20.53■□□□□ 0.88
NME1-203ENST00000393196 EXOC7Q9UPT5 735 aa20.53■□□□□ 0.88
NME1-203ENST00000393196 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.53■□□□□ 0.88
NME1-203ENST00000393196 CHD7Q9P2D1 2997 aa20.53■□□□□ 0.88
NME1-203ENST00000393196 TTLL13PA6NNM8 815 aa20.52■□□□□ 0.88
NME1-203ENST00000393196 RFXAPO00287 272 aa20.52■□□□□ 0.88
NME1-203ENST00000393196 HNRNPDLO14979 420 aaKnown RBP20.52■□□□□ 0.88
NME1-203ENST00000393196 CLDN3O15551 220 aa20.52■□□□□ 0.88
NME1-203ENST00000393196 PFKFB1P16118 471 aa20.52■□□□□ 0.88
NME1-203ENST00000393196 PROZP22891 400 aa20.52■□□□□ 0.88
NME1-203ENST00000393196 MLH1P40692 756 aa20.52■□□□□ 0.88
NME1-203ENST00000393196 GRM5P41594 1212 aa20.52■□□□□ 0.88
NME1-203ENST00000393196 ASIC1P78348 528 aa20.52■□□□□ 0.88
NME1-203ENST00000393196 PLCB3Q01970 1234 aa20.52■□□□□ 0.88
NME1-203ENST00000393196 GRIK3Q13003 919 aa20.52■□□□□ 0.88
NME1-203ENST00000393196 BMS1Q14692 1282 aaKnown RBP20.52■□□□□ 0.88
NME1-203ENST00000393196 NOLC1Q14978 699 aaKnown RBP eCLIP20.52■□□□□ 0.88
NME1-203ENST00000393196 EEF1DP3Q658K8 133 aa20.52■□□□□ 0.88
NME1-203ENST00000393196 LRRC55Q6ZSA7 311 aa20.52■□□□□ 0.88
NME1-203ENST00000393196 ZNF720Q7Z2F6 126 aa20.52■□□□□ 0.88
NME1-203ENST00000393196 KLHL23Q8NBE8 558 aa20.52■□□□□ 0.88
NME1-203ENST00000393196 GAD1Q99259 594 aa20.52■□□□□ 0.88
NME1-203ENST00000393196 CDT1Q9H211 546 aa20.52■□□□□ 0.88
NME1-203ENST00000393196 HPSEQ9Y251 543 aa20.52■□□□□ 0.88
NME1-203ENST00000393196 HES2Q9Y543 173 aa20.52■□□□□ 0.88
NME1-203ENST00000393196 MEIS3P2A8K0S8 358 aa20.51■□□□□ 0.87
NME1-203ENST00000393196 ZC3H11AO75152 810 aaKnown RBP eCLIP20.51■□□□□ 0.87
NME1-203ENST00000393196 FGF18O76093 207 aa20.51■□□□□ 0.87
NME1-203ENST00000393196 SYKP43405 635 aa20.51■□□□□ 0.87
NME1-203ENST00000393196 BCAR1P56945 870 aa20.51■□□□□ 0.87
NME1-203ENST00000393196 FSIP1Q8NA03 581 aa20.51■□□□□ 0.87
NME1-203ENST00000393196 TMEM169Q96HH4 297 aa20.51■□□□□ 0.87
NME1-203ENST00000393196 FIZ1Q96SL8 496 aa20.51■□□□□ 0.87
NME1-203ENST00000393196 RNF39Q9H2S5 420 aa20.51■□□□□ 0.87
NME1-203ENST00000393196 RALGAPA2Q2PPJ7 1873 aa20.5■□□□□ 0.87
NME1-203ENST00000393196 A0A1B0GVL5 298 aa20.5■□□□□ 0.87
NME1-203ENST00000393196 FSD2A1L4K1 749 aa20.5■□□□□ 0.87
NME1-203ENST00000393196 RECQL4O94761 1208 aa20.5■□□□□ 0.87
NME1-203ENST00000393196 ALDH2P05091 517 aa20.5■□□□□ 0.87
NME1-203ENST00000393196 EDN1P05305 212 aa20.5■□□□□ 0.87
NME1-203ENST00000393196 ITGB1P05556 798 aa20.5■□□□□ 0.87
NME1-203ENST00000393196 AKAP5P24588 427 aa20.5■□□□□ 0.87
NME1-203ENST00000393196 MATR3P43243 847 aaKnown RBP eCLIP20.5■□□□□ 0.87
NME1-203ENST00000393196 MCL1Q07820 350 aa20.5■□□□□ 0.87
NME1-203ENST00000393196 SLFN12LQ6IEE8 588 aa20.5■□□□□ 0.87
NME1-203ENST00000393196 SPPL3Q8TCT6 385 aa20.5■□□□□ 0.87
NME1-203ENST00000393196 ACCSQ96QU6 501 aa20.5■□□□□ 0.87
NME1-203ENST00000393196 SNTG2Q9NY99 539 aa20.5■□□□□ 0.87
NME1-203ENST00000393196 ANKFY1Q9P2R3 1169 aa20.5■□□□□ 0.87
NME1-203ENST00000393196 MYO9BQ13459 2157 aa20.49■□□□□ 0.87
NME1-203ENST00000393196 PVALEFA0A1B0GWK0 134 aa20.49■□□□□ 0.87
NME1-203ENST00000393196 NCK2O43639 380 aa20.49■□□□□ 0.87
NME1-203ENST00000393196 NMT1P30419 496 aaKnown RBP20.49■□□□□ 0.87
NME1-203ENST00000393196 POSTNQ15063 836 aa20.49■□□□□ 0.87
NME1-203ENST00000393196 KANK3Q6NY19 840 aa20.49■□□□□ 0.87
NME1-203ENST00000393196 UNC13DQ70J99 1090 aa20.49■□□□□ 0.87
NME1-203ENST00000393196 SLC39A11Q8N1S5 342 aa20.49■□□□□ 0.87
NME1-203ENST00000393196 ACAP3Q96P50 834 aa20.49■□□□□ 0.87
NME1-203ENST00000393196 GBP3Q9H0R5 595 aa20.49■□□□□ 0.87
NME1-203ENST00000393196 NSUN3Q9H649 340 aaKnown RBP20.49■□□□□ 0.87
NME1-203ENST00000393196 NRDE2Q9H7Z3 1164 aa20.49■□□□□ 0.87
NME1-203ENST00000393196 TMEM206Q9H813 350 aa20.49■□□□□ 0.87
NME1-203ENST00000393196 USP20Q9Y2K6 914 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms