RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 NAB2Q15742 525 aa13.08□□□□□ -0.32
GABPB1-203ENST00000380877 OTOP1Q7RTM1 612 aa13.08□□□□□ -0.32
GABPB1-203ENST00000380877 RNF139Q8WU17 664 aa13.08□□□□□ -0.32
GABPB1-203ENST00000380877 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.08□□□□□ -0.32
GABPB1-203ENST00000380877 ASNSD1Q9NWL6 643 aa13.08□□□□□ -0.32
GABPB1-203ENST00000380877 EXTL3O43909 919 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 TADA3O75528 432 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 ZBED1O96006 694 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 NPTX2P47972 431 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 PMS1P54277 932 aaKnown RBP13.07□□□□□ -0.32
GABPB1-203ENST00000380877 E2F4Q16254 413 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 ZSCAN26Q16670 478 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 ZNF720Q7Z2F6 126 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 SPATA4Q8NEY3 305 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 MORC4Q8TE76 937 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 OPTNQ96CV9 577 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 MTMR9Q96QG7 549 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 NCAPGQ9BPX3 1015 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 FZD1Q9UP38 647 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 FAM208AQ9UK61 1670 aaKnown RBP13.07□□□□□ -0.32
GABPB1-203ENST00000380877 CXCL11O14625 94 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 PTPRAP18433 802 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 SDC4P31431 198 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 TMEM62Q0P6H9 643 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 TFDP2Q14188 446 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 TMEM119Q4V9L6 283 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 CC2D1AQ6P1N0 951 aaPredicted RBP13.07□□□□□ -0.32
GABPB1-203ENST00000380877 SLC30A5Q8TAD4 765 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 GLIS2Q9BZE0 524 aaPredicted RBP13.07□□□□□ -0.32
GABPB1-203ENST00000380877 GBA2Q9HCG7 927 aaPredicted RBP13.07□□□□□ -0.32
GABPB1-203ENST00000380877 PCSK1NQ9UHG2 260 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 SLIT2O94813 1529 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 GRID2IPA4D2P6 1211 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 INHBAP08476 426 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 GUCY2CP25092 1073 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 GCLCP48506 637 aaPredicted RBP13.07□□□□□ -0.32
GABPB1-203ENST00000380877 ARHGEF18Q6ZSZ5 1173 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 C10orf67Q8IYJ2 551 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 ZNF560Q96MR9 790 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 CBWD1Q9BRT8 395 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 WNT8AQ9H1J5 351 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 RANBP17Q9H2T7 1088 aaKnown RBP13.07□□□□□ -0.32
GABPB1-203ENST00000380877 OLFML3Q9NRN5 406 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 IP6K2Q9UHH9 426 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 LCMT1Q9UIC8 334 aa13.07□□□□□ -0.32
GABPB1-203ENST00000380877 ESYT3A0FGR9 886 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 GAS2O43903 313 aaKnown RBP13.06□□□□□ -0.32
GABPB1-203ENST00000380877 CYP2C9P11712 490 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 SGSM1Q2NKQ1 1148 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 ALS2CLQ60I27 953 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 MAP1SQ66K74 1059 aaPredicted RBP13.06□□□□□ -0.32
GABPB1-203ENST00000380877 GJB7Q6PEY0 223 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 RHOT1Q8IXI2 618 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 CDKL2Q92772 493 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 SYN2Q92777 582 aaPredicted RBP13.06□□□□□ -0.32
GABPB1-203ENST00000380877 DNAJC17Q9NVM6 304 aaKnown RBP13.06□□□□□ -0.32
GABPB1-203ENST00000380877 NOC2LQ9Y3T9 749 aaKnown RBP13.06□□□□□ -0.32
GABPB1-203ENST00000380877 SLITRK3O94933 977 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 SLCO1A2P46721 670 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 OAZ1P54368 228 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 NOP14P78316 857 aaKnown RBP13.06□□□□□ -0.32
GABPB1-203ENST00000380877 DGKDQ16760 1214 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 FAM102AQ5T9C2 384 aaPredicted RBP13.06□□□□□ -0.32
GABPB1-203ENST00000380877 POTEAQ6S8J7 498 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 KCNK18Q7Z418 384 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 SH3RF1Q7Z6J0 888 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 CBWD2Q8IUF1 395 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 FBXO16Q8IX29 292 aaPredicted RBP13.06□□□□□ -0.32
GABPB1-203ENST00000380877 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.06□□□□□ -0.32
GABPB1-203ENST00000380877 RBBP8NLQ8NC74 664 aaPredicted RBP13.06□□□□□ -0.32
GABPB1-203ENST00000380877 KATNAL1Q9BW62 490 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 GPRC5DQ9NZD1 345 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 AFDNP55196 1824 aaKnown RBP13.06□□□□□ -0.32
GABPB1-203ENST00000380877 RARRES1P49788 294 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 RBP5P82980 135 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 TMEM132DQ14C87 1099 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 BBS9Q3SYG4 887 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 TRIM65Q6PJ69 517 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 CDR2LQ86X02 465 aaPredicted RBP13.06□□□□□ -0.32
GABPB1-203ENST00000380877 DNERQ8NFT8 737 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 SLC5A5Q92911 643 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 ROBO1Q9Y6N7 1651 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 EML1O00423 815 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 MEIS2O14770 477 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 AKAP3O75969 853 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 FIGNQ5HY92 759 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 PDIK1LQ8N165 341 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 PI4K2AQ9BTU6 479 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 INTS9Q9NV88 658 aaKnown RBP13.06□□□□□ -0.32
GABPB1-203ENST00000380877 SLC12A6Q9UHW9 1150 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 PCDHB2Q9Y5E7 798 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 SNX9Q9Y5X1 595 aa13.06□□□□□ -0.32
GABPB1-203ENST00000380877 PLEKP08567 350 aaPredicted RBP13.05□□□□□ -0.32
GABPB1-203ENST00000380877 IFNAR2P48551 515 aa13.05□□□□□ -0.32
GABPB1-203ENST00000380877 ERVK-24P63145 666 aa13.05□□□□□ -0.32
GABPB1-203ENST00000380877 ARL13BQ3SXY8 428 aa13.05□□□□□ -0.32
GABPB1-203ENST00000380877 TTC19Q6DKK2 380 aaPredicted RBP13.05□□□□□ -0.32
GABPB1-203ENST00000380877 TATDN1Q6P1N9 297 aa13.05□□□□□ -0.32
GABPB1-203ENST00000380877 THEM5Q8N1Q8 247 aa13.05□□□□□ -0.32
GABPB1-203ENST00000380877 GIMAP7Q8NHV1 300 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms