RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 ZNF568Q3ZCX4 644 aa13.85□□□□□ -0.19
SMN1-202ENST00000380707 ZNF598Q86UK7 904 aaKnown RBP13.85□□□□□ -0.19
SMN1-202ENST00000380707 ECHDC2Q86YB7 292 aa13.85□□□□□ -0.19
SMN1-202ENST00000380707 ADSSL1Q8N142 457 aa13.85□□□□□ -0.19
SMN1-202ENST00000380707 ADPGKQ9BRR6 497 aa13.85□□□□□ -0.19
SMN1-202ENST00000380707 TRIM6Q9C030 488 aaPredicted RBP13.85□□□□□ -0.19
SMN1-202ENST00000380707 PRO3102Q9H379 93 aa13.85□□□□□ -0.19
SMN1-202ENST00000380707 NXF3Q9H4D5 531 aaKnown RBP13.85□□□□□ -0.19
SMN1-202ENST00000380707 IPPQ9Y573 584 aa13.85□□□□□ -0.19
SMN1-202ENST00000380707 MEIS3P2A8K0S8 358 aa13.85□□□□□ -0.19
SMN1-202ENST00000380707 UPP2O95045 317 aa13.85□□□□□ -0.19
SMN1-202ENST00000380707 KIF20AO95235 890 aa13.85□□□□□ -0.19
SMN1-202ENST00000380707 AMHP03971 560 aa13.85□□□□□ -0.19
SMN1-202ENST00000380707 MCF2P10911 925 aa13.85□□□□□ -0.19
SMN1-202ENST00000380707 HARSP12081 509 aaKnown RBP13.85□□□□□ -0.19
SMN1-202ENST00000380707 MATR3P43243 847 aaKnown RBP eCLIP13.85□□□□□ -0.19
SMN1-202ENST00000380707 RAB27AP51159 221 aa13.85□□□□□ -0.19
SMN1-202ENST00000380707 NOLC1Q14978 699 aaKnown RBP eCLIP13.85□□□□□ -0.19
SMN1-202ENST00000380707 DCAF4L1Q3SXM0 396 aa13.85□□□□□ -0.19
SMN1-202ENST00000380707 MRPL10Q7Z7H8 261 aaKnown RBP13.85□□□□□ -0.19
SMN1-202ENST00000380707 RNF169Q8NCN4 708 aa13.85□□□□□ -0.19
SMN1-202ENST00000380707 ZSWIM2Q8NEG5 633 aa13.85□□□□□ -0.19
SMN1-202ENST00000380707 POMGNT1Q8WZA1 660 aa13.85□□□□□ -0.19
SMN1-202ENST00000380707 LPPQ93052 612 aa13.85□□□□□ -0.19
SMN1-202ENST00000380707 TOP1MTQ969P6 601 aa13.85□□□□□ -0.19
SMN1-202ENST00000380707 RNPC3Q96LT9 517 aaKnown RBP13.85□□□□□ -0.19
SMN1-202ENST00000380707 CBWD1Q9BRT8 395 aa13.85□□□□□ -0.19
SMN1-202ENST00000380707 SEMA6BQ9H3T3 888 aa13.85□□□□□ -0.19
SMN1-202ENST00000380707 AGPAT3Q9NRZ7 376 aa13.85□□□□□ -0.19
SMN1-202ENST00000380707 SLC4A7Q9Y6M7 1214 aa13.85□□□□□ -0.19
SMN1-202ENST00000380707 TTC3P53804 2025 aa13.84□□□□□ -0.19
SMN1-202ENST00000380707 PDXKO00764 312 aa13.84□□□□□ -0.19
SMN1-202ENST00000380707 CLIC2O15247 247 aa13.84□□□□□ -0.19
SMN1-202ENST00000380707 FAM189A1O60320 539 aa13.84□□□□□ -0.19
SMN1-202ENST00000380707 EOMESO95936 686 aa13.84□□□□□ -0.19
SMN1-202ENST00000380707 SKIP12755 728 aa13.84□□□□□ -0.19
SMN1-202ENST00000380707 NLRP12P59046 1061 aa13.84□□□□□ -0.19
SMN1-202ENST00000380707 OSTNP61366 133 aa13.84□□□□□ -0.19
SMN1-202ENST00000380707 DPCR1Q3MIW9 517 aa13.84□□□□□ -0.19
SMN1-202ENST00000380707 SEZ6Q53EL9 994 aa13.84□□□□□ -0.19
SMN1-202ENST00000380707 SLFN12LQ6IEE8 588 aa13.84□□□□□ -0.19
SMN1-202ENST00000380707 TMEM192Q8IY95 271 aa13.84□□□□□ -0.19
SMN1-202ENST00000380707 THNSL1Q8IYQ7 743 aa13.84□□□□□ -0.19
SMN1-202ENST00000380707 CEP120Q8N960 986 aa13.84□□□□□ -0.19
SMN1-202ENST00000380707 MSTO1Q9BUK6 570 aa13.84□□□□□ -0.19
SMN1-202ENST00000380707 MTIF3Q9H2K0 278 aaKnown RBP13.84□□□□□ -0.19
SMN1-202ENST00000380707 PCIF1Q9H4Z3 704 aa13.84□□□□□ -0.19
SMN1-202ENST00000380707 ELAC1Q9H777 363 aaKnown RBP13.84□□□□□ -0.19
SMN1-202ENST00000380707 TYW1Q9NV66 732 aaKnown RBP13.84□□□□□ -0.19
SMN1-202ENST00000380707 TMEM161AQ9NX61 479 aa13.84□□□□□ -0.19
SMN1-202ENST00000380707 SNTG2Q9NY99 539 aa13.84□□□□□ -0.19
SMN1-202ENST00000380707 PCDHB7Q9Y5E2 793 aa13.84□□□□□ -0.19
SMN1-202ENST00000380707 ATP2A2P16615 1042 aaKnown RBP13.83□□□□□ -0.2
SMN1-202ENST00000380707 GARTP22102 1010 aa13.83□□□□□ -0.2
SMN1-202ENST00000380707 AKAP5P24588 427 aa13.83□□□□□ -0.2
SMN1-202ENST00000380707 PMS1P54277 932 aaKnown RBP13.83□□□□□ -0.2
SMN1-202ENST00000380707 SNRPFP62306 86 aaKnown RBP13.83□□□□□ -0.2
SMN1-202ENST00000380707 STIM1Q13586 685 aa13.83□□□□□ -0.2
SMN1-202ENST00000380707 ZCWPW2Q504Y3 356 aa13.83□□□□□ -0.2
SMN1-202ENST00000380707 ZBTB41Q5SVQ8 909 aa13.83□□□□□ -0.2
SMN1-202ENST00000380707 FAM109BQ6ICB4 259 aaPredicted RBP13.83□□□□□ -0.2
SMN1-202ENST00000380707 CENPPQ6IPU0 288 aa13.83□□□□□ -0.2
SMN1-202ENST00000380707 KLHL10Q6JEL2 608 aa13.83□□□□□ -0.2
SMN1-202ENST00000380707 FAM117BQ6P1L5 589 aa13.83□□□□□ -0.2
SMN1-202ENST00000380707 ARMCX5Q6P1M9 558 aa13.83□□□□□ -0.2
SMN1-202ENST00000380707 AGMOQ6ZNB7 445 aa13.83□□□□□ -0.2
SMN1-202ENST00000380707 HS2ST1Q7LGA3 356 aa13.83□□□□□ -0.2
SMN1-202ENST00000380707 APBB1IPQ7Z5R6 666 aaPredicted RBP13.83□□□□□ -0.2
SMN1-202ENST00000380707 NPAS4Q8IUM7 802 aa13.83□□□□□ -0.2
SMN1-202ENST00000380707 TDHQ8IZJ6 230 aa13.83□□□□□ -0.2
SMN1-202ENST00000380707 APOL6Q9BWW8 343 aa13.83□□□□□ -0.2
SMN1-202ENST00000380707 AGO2Q9UKV8 859 aaKnown RBP13.83□□□□□ -0.2
SMN1-202ENST00000380707 LRFN2Q9ULH4 789 aa13.83□□□□□ -0.2
SMN1-202ENST00000380707 TRAF3IP3Q9Y228 551 aa13.83□□□□□ -0.2
SMN1-202ENST00000380707 PTPRSQ13332 1948 aa13.82□□□□□ -0.2
SMN1-202ENST00000380707 OGTO15294 1046 aa13.82□□□□□ -0.2
SMN1-202ENST00000380707 STAG3L1P0CL83 205 aa13.82□□□□□ -0.2
SMN1-202ENST00000380707 FGFR1P11362 822 aa13.82□□□□□ -0.2
SMN1-202ENST00000380707 ITGA4P13612 1032 aa13.82□□□□□ -0.2
SMN1-202ENST00000380707 TNFSF9P41273 254 aa13.82□□□□□ -0.2
SMN1-202ENST00000380707 GRM5P41594 1212 aa13.82□□□□□ -0.2
SMN1-202ENST00000380707 ANKRD40Q6AI12 368 aa13.82□□□□□ -0.2
SMN1-202ENST00000380707 SASS6Q6UVJ0 657 aa13.82□□□□□ -0.2
SMN1-202ENST00000380707 MLKLQ8NB16 471 aa13.82□□□□□ -0.2
SMN1-202ENST00000380707 GOLGA5Q8TBA6 731 aa13.82□□□□□ -0.2
SMN1-202ENST00000380707 PHOSPHO2Q8TCD6 241 aa13.82□□□□□ -0.2
SMN1-202ENST00000380707 SAAL1Q96ER3 474 aa13.82□□□□□ -0.2
SMN1-202ENST00000380707 DHTKD1Q96HY7 919 aaPredicted RBP13.82□□□□□ -0.2
SMN1-202ENST00000380707 SLC9A7Q96T83 725 aa13.82□□□□□ -0.2
SMN1-202ENST00000380707 RNF19AQ9NV58 838 aa13.82□□□□□ -0.2
SMN1-202ENST00000380707 HSPBP1Q9NZL4 362 aa13.82□□□□□ -0.2
SMN1-202ENST00000380707 CGNQ9P2M7 1197 aaKnown RBP13.82□□□□□ -0.2
SMN1-202ENST00000380707 SYCE3A1L190 88 aa13.81□□□□□ -0.2
SMN1-202ENST00000380707 TRIM49BA6NDI0 452 aa13.81□□□□□ -0.2
SMN1-202ENST00000380707 GRXCR1A8MXD5 290 aa13.81□□□□□ -0.2
SMN1-202ENST00000380707 PSMA7O14818 248 aa13.81□□□□□ -0.2
SMN1-202ENST00000380707 MEFVO15553 781 aaPredicted RBP13.81□□□□□ -0.2
SMN1-202ENST00000380707 DGKIO75912 1065 aa13.81□□□□□ -0.2
SMN1-202ENST00000380707 RECQL4O94761 1208 aa13.81□□□□□ -0.2
SMN1-202ENST00000380707 LETM1O95202 739 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms