RNA–Protein interactions for RNA: ENST00000380097.7

TRIM6-202, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 3,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-202ENST00000380097 TROVE2P10155 538 aaKnown RBP eCLIP7.78□□□□□ -1.16
TRIM6-202ENST00000380097 KRT15P19012 456 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 SERPINB3P29508 390 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 EN1Q05925 392 aaPredicted RBP7.78□□□□□ -1.16
TRIM6-202ENST00000380097 SPARCL1Q14515 664 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 CALCRLQ16602 461 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 KYNUQ16719 465 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 GSTA3Q16772 222 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 LIN52Q52LA3 116 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 CCDC62Q6P9F0 684 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 RFX8Q6ZV50 586 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 GLYCTKQ8IVS8 523 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 RBM17Q96I25 401 aaKnown RBP7.78□□□□□ -1.16
TRIM6-202ENST00000380097 C6orf50Q9HD87 102 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 GRHL1Q9NZI5 618 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 ZNF652Q9Y2D9 606 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 STARD13Q9Y3M8 1113 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 WNK3Q9BYP7 1800 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 SPAG7O75391 227 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 ZWINTO95229 277 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 PSMG1O95456 288 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 LMNB1P20700 586 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 TNFAIP3P21580 790 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 GNA11P29992 359 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 CCNFP41002 786 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 KCNJ1P48048 391 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 COASYQ13057 564 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 RRP1BQ14684 758 aaKnown RBP7.78□□□□□ -1.16
TRIM6-202ENST00000380097 LLGL1Q15334 1064 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 ZC2HC1CQ53FD0 456 aaPredicted RBP7.78□□□□□ -1.16
TRIM6-202ENST00000380097 CCDC125Q86Z20 511 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 LZICQ8WZA0 190 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 NR1H4Q96RI1 486 aaPredicted RBP7.78□□□□□ -1.16
TRIM6-202ENST00000380097 GANQ9H2C0 597 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 METTL14Q9HCE5 456 aaKnown RBP7.78□□□□□ -1.16
TRIM6-202ENST00000380097 UBN1Q9NPG3 1134 aa7.78□□□□□ -1.16
TRIM6-202ENST00000380097 PAIP2BQ9ULR5 123 aaKnown RBP7.78□□□□□ -1.16
TRIM6-202ENST00000380097 COL22A1Q8NFW1 1626 aaPredicted RBP7.78□□□□□ -1.16
TRIM6-202ENST00000380097 CDH16O75309 829 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 CETN2P41208 172 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 ERFP50548 548 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 AP1B1Q10567 949 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 MPP2Q14168 576 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 DAB2IPQ5VWQ8 1189 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 RFWD3Q6PCD5 774 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 DSTYKQ6XUX3 929 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 TSHZ1Q6ZSZ6 1077 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 MTDHQ86UE4 582 aaKnown RBP7.77□□□□□ -1.17
TRIM6-202ENST00000380097 SMC1BQ8NDV3 1235 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 SLC7A6OSQ96CW6 309 aaPredicted RBP7.77□□□□□ -1.17
TRIM6-202ENST00000380097 NMD3Q96D46 503 aaKnown RBP7.77□□□□□ -1.17
TRIM6-202ENST00000380097 IFT43Q96FT9 208 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 UBA5Q9GZZ9 404 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 ASCC2Q9H1I8 757 aaPredicted RBP7.77□□□□□ -1.17
TRIM6-202ENST00000380097 SLCO1B3Q9NPD5 702 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 DCTN4Q9UJW0 460 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 LRP6O75581 1613 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 MYH6P13533 1939 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 SMCO2A6NFE2 343 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 DDX3XO00571 662 aaKnown RBP eCLIP7.77□□□□□ -1.17
TRIM6-202ENST00000380097 PCP11498 1178 aaKnown RBP7.77□□□□□ -1.17
TRIM6-202ENST00000380097 ANXA13P27216 316 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 HOXA7P31268 230 aaPredicted RBP7.77□□□□□ -1.17
TRIM6-202ENST00000380097 MAGEA10P43363 369 aaPredicted RBP7.77□□□□□ -1.17
TRIM6-202ENST00000380097 VPS41P49754 854 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 GRB10Q13322 594 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 THOC5Q13769 683 aaKnown RBP7.77□□□□□ -1.17
TRIM6-202ENST00000380097 CGB2Q6NT52 195 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 AADACL2Q6P093 401 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 IZUMO2Q6UXV1 221 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 NLRP9Q7RTR0 991 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 SPATA24Q86W54 205 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 PNMA1Q8ND90 353 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 CFAP61Q8NHU2 1237 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 RAD54LQ92698 747 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 CLMNQ96JQ2 1002 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 CYTH2Q99418 400 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 TUBB6Q9BUF5 446 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 VAT1LQ9HCJ6 419 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 BLOC1S4Q9NUP1 217 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 MROH5Q6ZUA9 1318 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 SPOPO43791 374 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 TBX10O75333 385 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 CIB2O75838 187 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 HAUS5O94927 633 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 CAMTA2O94983 1202 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 ESRRAP11474 423 aaPredicted RBP7.77□□□□□ -1.17
TRIM6-202ENST00000380097 CA4P22748 312 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 FOXN2P32314 431 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 RTP1P59025 263 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 DSG1Q02413 1049 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 CACNB1Q02641 598 aaPredicted RBP7.77□□□□□ -1.17
TRIM6-202ENST00000380097 CHRNDQ07001 517 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 CTTNQ14247 550 aaKnown RBP7.77□□□□□ -1.17
TRIM6-202ENST00000380097 CC2D2BQ6DHV5 1058 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 POTEAQ6S8J7 498 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 CYFIP1Q7L576 1253 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 MAP7D3Q8IWC1 876 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 TBCKQ8TEA7 893 aa7.77□□□□□ -1.17
TRIM6-202ENST00000380097 SNRNP27Q8WVK2 155 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms