RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 KITP10721 976 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 ZBED8Q8IZ13 594 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 MXD3Q9BW11 206 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 ADNPQ9H2P0 1102 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 SAYSD1Q9NPB0 183 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 TNPO2O14787 897 aaKnown RBP11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 CASP14P31944 242 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 NME3Q13232 169 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 MAPRE1Q15691 268 aaKnown RBP11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 C11orf96Q7Z7L8 435 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 CYTH2Q99418 400 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 FHDC1Q9C0D6 1143 aaPredicted RBP11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 HOXC10Q9NYD6 342 aa11.86□□□□□ -0.51
PTCHD1-201ENST00000379361 NDUFS3O75489 264 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 PRELPP51888 382 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 PFKFB2O60825 505 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 SLC16A1P53985 500 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 TFDP2Q14188 446 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 USP39Q53GS9 565 aaKnown RBP11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 DYDC2Q96IM9 177 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 PCDHB7Q9Y5E2 793 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 ADCK5Q3MIX3 580 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 P2RX5Q93086 422 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 GINS4Q9BRT9 223 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 NT5C2P49902 561 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 CUL4AQ13619 759 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 SCUBE2Q9NQ36 999 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 PCDHB15Q9Y5E8 787 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 STAT3P40763 770 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 RGS4P49798 205 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 KCTD16Q68DU8 428 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 KCNV1Q6PIU1 500 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 CDKL3Q8IVW4 592 aaPredicted RBP11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 ZNF560Q96MR9 790 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 CHMP2BQ9UQN3 213 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 UBA6A0AVT1 1052 aaPredicted RBP11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 PCIF1Q9H4Z3 704 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 PCDHGA4Q9Y5G9 962 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 SNX14Q9Y5W7 946 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 TWF1Q12792 350 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 CCDC157Q569K6 752 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 TRIM65Q6PJ69 517 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 SUCLG2Q96I99 432 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 DDX28Q9NUL7 540 aaKnown RBP11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 TSR3Q9UJK0 312 aaKnown RBP11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 CARMIL3Q8ND23 1372 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 ABCC10Q5T3U5 1492 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 FYNP06241 537 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 CYP27A1Q02318 531 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 SARM1Q6SZW1 724 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 C17orf80Q9BSJ5 609 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 SCN8AQ9UQD0 1980 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 SNX31Q8N9S9 440 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 NRBP1Q9UHY1 535 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 MMGT1Q8N4V1 131 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 TUBGCP3Q96CW5 907 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 STXBP3O00186 592 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 ROR1Q01973 937 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 ADCK1Q86TW2 530 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 SPON2Q9BUD6 331 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 PDE11AQ9HCR9 933 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 ARHGEF3Q9NR81 526 aa11.85□□□□□ -0.51
PTCHD1-201ENST00000379361 A0A087WUV0 522 aaPredicted RBP11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 BMP10O95393 424 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 DCDC2Q9UHG0 476 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 DDX17Q92841 729 aaKnown RBP11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 BRD8Q9H0E9 1235 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 C2orf54Q08AI8 447 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 GSTA3Q16772 222 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 DPP10Q8N608 796 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 VPS9D1Q9Y2B5 631 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 MYLK2Q9H1R3 596 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 ERAP1Q9NZ08 941 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 ASXL2Q76L83 1435 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 GJC2Q5T442 439 aaPredicted RBP11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 ERAP2Q6P179 960 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 TMED8Q6PL24 325 aaPredicted RBP11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 MICALL2Q8IY33 904 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 PCDHA13Q9Y5I0 950 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 PEX1O43933 1283 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 HIPK4Q8NE63 616 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 TM6SF1Q9BZW5 370 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 AKAP7Q9P0M2 348 aaPredicted RBP11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 M0R3G1 203 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 VAMP4O75379 141 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 USP17L2Q6R6M4 530 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 FAM47EQ6ZV65 393 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 FANCLQ9NW38 375 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 CLASP2O75122 1294 aaKnown RBP11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 VPS37AQ8NEZ2 397 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 MRPL4Q9BYD3 311 aaKnown RBP11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 KLHL31Q9H511 634 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 RPS6KB2Q9UBS0 482 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 USP17L8P0C7I0 530 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 ERVK-10P10266 1014 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 ALDH1A3P47895 512 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 NNTQ13423 1086 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 CMTR1Q8N1G2 835 aaKnown RBP11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 KRT84Q9NSB2 600 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 TMEM35BQ8NCS4 154 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms