RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 ZNF280BQ86YH2 543 aa15.2■□□□□ 0.02
PRPF18-202ENST00000378572 C4orf19Q8IY42 314 aa15.2■□□□□ 0.02
PRPF18-202ENST00000378572 PRSS33Q8NF86 280 aa15.2■□□□□ 0.02
PRPF18-202ENST00000378572 HAS1Q92839 578 aa15.2■□□□□ 0.02
PRPF18-202ENST00000378572 EMILIN2Q9BXX0 1053 aa15.2■□□□□ 0.02
PRPF18-202ENST00000378572 TRIM6Q9C030 488 aaPredicted RBP15.2■□□□□ 0.02
PRPF18-202ENST00000378572 MINDY3Q9H8M7 445 aa15.2■□□□□ 0.02
PRPF18-202ENST00000378572 PRG3Q9Y2Y8 225 aaPredicted RBP15.2■□□□□ 0.02
PRPF18-202ENST00000378572 ARID2Q68CP9 1835 aa15.2■□□□□ 0.02
PRPF18-202ENST00000378572 FAM237AA0A1B0GTK4 181 aa15.2■□□□□ 0.02
PRPF18-202ENST00000378572 INO80B-WBP1J3KQ70 363 aa15.2■□□□□ 0.02
PRPF18-202ENST00000378572 C2CD2LO14523 706 aa15.2■□□□□ 0.02
PRPF18-202ENST00000378572 ITGA4P13612 1032 aa15.2■□□□□ 0.02
PRPF18-202ENST00000378572 KLRC2P26717 231 aa15.2■□□□□ 0.02
PRPF18-202ENST00000378572 TFDP1Q14186 410 aa15.2■□□□□ 0.02
PRPF18-202ENST00000378572 CALCRLQ16602 461 aa15.2■□□□□ 0.02
PRPF18-202ENST00000378572 ATAT1Q5SQI0 421 aa15.2■□□□□ 0.02
PRPF18-202ENST00000378572 IER5LQ5T953 404 aa15.2■□□□□ 0.02
PRPF18-202ENST00000378572 KANK3Q6NY19 840 aa15.2■□□□□ 0.02
PRPF18-202ENST00000378572 TMC5Q6UXY8 1006 aa15.2■□□□□ 0.02
PRPF18-202ENST00000378572 AGMOQ6ZNB7 445 aa15.2■□□□□ 0.02
PRPF18-202ENST00000378572 PPFIBP1Q86W92 1011 aa15.2■□□□□ 0.02
PRPF18-202ENST00000378572 PRRX2Q99811 253 aa15.2■□□□□ 0.02
PRPF18-202ENST00000378572 FAN1Q9Y2M0 1017 aa15.2■□□□□ 0.02
PRPF18-202ENST00000378572 ASAP2O43150 1006 aa15.19■□□□□ 0.02
PRPF18-202ENST00000378572 URODP06132 367 aa15.19■□□□□ 0.02
PRPF18-202ENST00000378572 OR52Z1P0C646 297 aa15.19■□□□□ 0.02
PRPF18-202ENST00000378572 PTPN14Q15678 1187 aa15.19■□□□□ 0.02
PRPF18-202ENST00000378572 CPB2Q96IY4 423 aa15.19■□□□□ 0.02
PRPF18-202ENST00000378572 TMEM60Q9H2L4 133 aa15.19■□□□□ 0.02
PRPF18-202ENST00000378572 KANSL3Q9P2N6 904 aa15.19■□□□□ 0.02
PRPF18-202ENST00000378572 SORCS3Q9UPU3 1222 aa15.19■□□□□ 0.02
PRPF18-202ENST00000378572 ZBTB39O15060 712 aa15.18■□□□□ 0.02
PRPF18-202ENST00000378572 B4GALT3O60512 393 aa15.18■□□□□ 0.02
PRPF18-202ENST00000378572 DDHD2O94830 711 aa15.18■□□□□ 0.02
PRPF18-202ENST00000378572 ALDH2P05091 517 aa15.18■□□□□ 0.02
PRPF18-202ENST00000378572 OR1G1P47890 313 aa15.18■□□□□ 0.02
PRPF18-202ENST00000378572 VCPP55072 806 aaKnown RBP15.18■□□□□ 0.02
PRPF18-202ENST00000378572 RESP18Q5W5W9 173 aa15.18■□□□□ 0.02
PRPF18-202ENST00000378572 KIAA1841Q6NSI8 718 aa15.18■□□□□ 0.02
PRPF18-202ENST00000378572 NOTUMQ6P988 496 aa15.18■□□□□ 0.02
PRPF18-202ENST00000378572 HACE1Q8IYU2 909 aa15.18■□□□□ 0.02
PRPF18-202ENST00000378572 FSIP1Q8NA03 581 aa15.18■□□□□ 0.02
PRPF18-202ENST00000378572 CNNM3Q8NE01 707 aa15.18■□□□□ 0.02
PRPF18-202ENST00000378572 MTMR9Q96QG7 549 aa15.18■□□□□ 0.02
PRPF18-202ENST00000378572 EIF2AK1Q9BQI3 630 aaKnown RBP15.18■□□□□ 0.02
PRPF18-202ENST00000378572 TMEM175Q9BSA9 504 aa15.18■□□□□ 0.02
PRPF18-202ENST00000378572 ANP32EQ9BTT0 268 aa15.18■□□□□ 0.02
PRPF18-202ENST00000378572 SFXN1Q9H9B4 322 aa15.18■□□□□ 0.02
PRPF18-202ENST00000378572 MRPL17Q9NRX2 175 aaKnown RBP15.18■□□□□ 0.02
PRPF18-202ENST00000378572 STK39Q9UEW8 545 aa15.18■□□□□ 0.02
PRPF18-202ENST00000378572 PCDHA12Q9UN75 941 aa15.18■□□□□ 0.02
PRPF18-202ENST00000378572 WDFY4Q6ZS81 3184 aa15.18■□□□□ 0.02
PRPF18-202ENST00000378572 TSPAN1O60635 241 aa15.17■□□□□ 0.02
PRPF18-202ENST00000378572 ASGR2P07307 311 aa15.17■□□□□ 0.02
PRPF18-202ENST00000378572 MLH1P40692 756 aa15.17■□□□□ 0.02
PRPF18-202ENST00000378572 TXKP42681 527 aa15.17■□□□□ 0.02
PRPF18-202ENST00000378572 AFF1P51825 1210 aaKnown RBP15.17■□□□□ 0.02
PRPF18-202ENST00000378572 MXD4Q14582 209 aaPredicted RBP15.17■□□□□ 0.02
PRPF18-202ENST00000378572 UBXN11Q5T124 520 aa15.17■□□□□ 0.02
PRPF18-202ENST00000378572 SHC4Q6S5L8 630 aa15.17■□□□□ 0.02
PRPF18-202ENST00000378572 CCDC73Q6ZRK6 1079 aa15.17■□□□□ 0.02
PRPF18-202ENST00000378572 SYAP1Q96A49 352 aaPredicted RBP15.17■□□□□ 0.02
PRPF18-202ENST00000378572 ASIC4Q96FT7 647 aa15.17■□□□□ 0.02
PRPF18-202ENST00000378572 VN1R3Q9BXE9 311 aa15.17■□□□□ 0.02
PRPF18-202ENST00000378572 EIF2AQ9BY44 585 aaKnown RBP15.17■□□□□ 0.02
PRPF18-202ENST00000378572 UBN1Q9NPG3 1134 aa15.17■□□□□ 0.02
PRPF18-202ENST00000378572 DDX19AQ9NUU7 478 aaKnown RBP15.17■□□□□ 0.02
PRPF18-202ENST00000378572 IPPQ9Y573 584 aa15.17■□□□□ 0.02
PRPF18-202ENST00000378572 KMT2EQ8IZD2 1858 aa15.17■□□□□ 0.02
PRPF18-202ENST00000378572 NRP1O14786 923 aa15.17■□□□□ 0.02
PRPF18-202ENST00000378572 NR1I2O75469 434 aa15.17■□□□□ 0.02
PRPF18-202ENST00000378572 LIG1P18858 919 aa15.17■□□□□ 0.02
PRPF18-202ENST00000378572 LONP1P36776 959 aaKnown RBP15.17■□□□□ 0.02
PRPF18-202ENST00000378572 FAM160A1Q05DH4 1040 aa15.17■□□□□ 0.02
PRPF18-202ENST00000378572 TMEM132AQ24JP5 1023 aa15.17■□□□□ 0.02
PRPF18-202ENST00000378572 DTHD1Q6ZMT9 781 aa15.17■□□□□ 0.02
PRPF18-202ENST00000378572 CCDC149Q6ZUS6 474 aa15.17■□□□□ 0.02
PRPF18-202ENST00000378572 MRPL10Q7Z7H8 261 aaKnown RBP15.17■□□□□ 0.02
PRPF18-202ENST00000378572 UBALD2Q8IYN6 164 aa15.17■□□□□ 0.02
PRPF18-202ENST00000378572 ENGASEQ8NFI3 743 aa15.17■□□□□ 0.02
PRPF18-202ENST00000378572 ACSF2Q96CM8 615 aaPredicted RBP15.17■□□□□ 0.02
PRPF18-202ENST00000378572 CLIC6Q96NY7 704 aa15.17■□□□□ 0.02
PRPF18-202ENST00000378572 GAD1Q99259 594 aa15.17■□□□□ 0.02
PRPF18-202ENST00000378572 MFSD1Q9H3U5 465 aa15.17■□□□□ 0.02
PRPF18-202ENST00000378572 TTC12Q9H892 705 aaPredicted RBP15.17■□□□□ 0.02
PRPF18-202ENST00000378572 LIMD1Q9UGP4 676 aa15.17■□□□□ 0.02
PRPF18-202ENST00000378572 HPSEQ9Y251 543 aa15.17■□□□□ 0.02
PRPF18-202ENST00000378572 HES2Q9Y543 173 aa15.17■□□□□ 0.02
PRPF18-202ENST00000378572 IRAK3Q9Y616 596 aa15.17■□□□□ 0.02
PRPF18-202ENST00000378572 ZDBF2Q9HCK1 2354 aa15.16■□□□□ 0.02
PRPF18-202ENST00000378572 USO1O60763 962 aaKnown RBP15.16■□□□□ 0.02
PRPF18-202ENST00000378572 PDGFBP01127 241 aaPredicted RBP15.16■□□□□ 0.02
PRPF18-202ENST00000378572 MYBP10242 640 aa15.16■□□□□ 0.02
PRPF18-202ENST00000378572 HOXA11P31270 313 aaPredicted RBP15.16■□□□□ 0.02
PRPF18-202ENST00000378572 SCNN1GP51170 649 aa15.16■□□□□ 0.02
PRPF18-202ENST00000378572 GRIN1Q05586 938 aa15.16■□□□□ 0.02
PRPF18-202ENST00000378572 SPIRE1Q08AE8 756 aa15.16■□□□□ 0.02
PRPF18-202ENST00000378572 ELMSAN1Q6PJG2 1045 aa15.16■□□□□ 0.02
PRPF18-202ENST00000378572 MAEAQ7L5Y9 396 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms