RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 EFHBQ8N7U6 833 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 MAP10Q9P2G4 905 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.5□□□□□ -0.57
HIF3A-205ENST00000377670 IPO5O00410 1097 aaKnown RBP11.5□□□□□ -0.57
HIF3A-205ENST00000377670 AMHP03971 560 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 URODP06132 367 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 TMC7Q7Z402 723 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 DCP1BQ8IZD4 617 aaKnown RBP11.5□□□□□ -0.57
HIF3A-205ENST00000377670 NKX2-3Q8TAU0 364 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 RNF217Q8TC41 542 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 ZNF512BQ96KM6 892 aaPredicted RBP11.5□□□□□ -0.57
HIF3A-205ENST00000377670 YIPF3Q9GZM5 350 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 NDST4Q9H3R1 872 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 UBE2TQ9NPD8 197 aaPredicted RBP11.5□□□□□ -0.57
HIF3A-205ENST00000377670 SLC38A7Q9NVC3 462 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 TBK1Q9UHD2 729 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 MRFAP1Q9Y605 127 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 SALL3Q9BXA9 1300 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 SNX1Q13596 522 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 CDO1Q16878 200 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 ANKRD20A4Q4UJ75 823 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 ANKRD20A8PQ5CZ79 823 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 ANKRD20A2Q5SQ80 823 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 ANKRD20A1Q5TYW2 823 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 DCLK2Q8N568 766 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 PIP4K2CQ8TBX8 421 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 ALDH8A1Q9H2A2 487 aaPredicted RBP11.5□□□□□ -0.57
HIF3A-205ENST00000377670 MROH8Q9H579 483 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 VCPKMTQ9H867 229 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 KCNQ5Q9NR82 932 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 FBXO2Q9UK22 296 aaPredicted RBP11.5□□□□□ -0.57
HIF3A-205ENST00000377670 EIF4A3P38919 411 aaKnown RBP11.5□□□□□ -0.57
HIF3A-205ENST00000377670 YWHAGP61981 247 aaKnown RBP eCLIP11.5□□□□□ -0.57
HIF3A-205ENST00000377670 JADE1Q6IE81 842 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 TOGARAM2Q6ZUX3 1019 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 RAPH1Q70E73 1250 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 SOCS4Q8WXH5 440 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 CALN1Q9BXU9 219 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 NOP53Q9NZM5 478 aaKnown RBP11.5□□□□□ -0.57
HIF3A-205ENST00000377670 PCDHB8Q9UN66 801 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 ADORA2BP29275 332 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 EFNA5P52803 228 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 NAA30Q147X3 362 aaPredicted RBP11.5□□□□□ -0.57
HIF3A-205ENST00000377670 PRMT6Q96LA8 375 aaPredicted RBP11.5□□□□□ -0.57
HIF3A-205ENST00000377670 SPZ1Q9BXG8 430 aa11.5□□□□□ -0.57
HIF3A-205ENST00000377670 MRPL47Q9HD33 250 aaKnown RBP11.5□□□□□ -0.57
HIF3A-205ENST00000377670 MYPNQ86TC9 1320 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 EIF4E1BA6NMX2 242 aaKnown RBP11.49□□□□□ -0.57
HIF3A-205ENST00000377670 PDHBP11177 359 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 KRT3P12035 628 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 ZNF543Q08ER8 600 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 DRP2Q13474 957 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 ERICH1Q86X53 443 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 FAM20AQ96MK3 541 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 NHEJ1Q9H9Q4 299 aaPredicted RBP11.49□□□□□ -0.57
HIF3A-205ENST00000377670 SMYD2Q9NRG4 433 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 SLIT1O75093 1534 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 TNS2Q63HR2 1409 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 PGRMC1O00264 195 aaKnown RBP11.49□□□□□ -0.57
HIF3A-205ENST00000377670 GTF2H3Q13889 308 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 UCMAQ8WVF2 138 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 SNX19Q92543 992 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 DPF2Q92785 391 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 PHF20Q9BVI0 1012 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 GPR182O15218 404 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 SLC16A4O15374 487 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 IRF1P10914 325 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 TTC39CQ8N584 583 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 SENP6Q9GZR1 1112 aaPredicted RBP11.49□□□□□ -0.57
HIF3A-205ENST00000377670 FAM217BQ9NTX9 383 aaPredicted RBP11.49□□□□□ -0.57
HIF3A-205ENST00000377670 ERAP1Q9NZ08 941 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 STAP1Q9ULZ2 295 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 SYNGAP1Q96PV0 1343 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 MCF2LO15068 1137 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 KPNA6O60684 536 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 INHBAP08476 426 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 FGFR2P21802 821 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 SP3Q02447 781 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 CXCL9Q07325 125 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 ACTN3Q08043 901 aaPredicted RBP11.49□□□□□ -0.57
HIF3A-205ENST00000377670 ZNF394Q53GI3 561 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 ACBD5Q5T8D3 534 aaPredicted RBP11.49□□□□□ -0.57
HIF3A-205ENST00000377670 CYP4F22Q6NT55 531 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 DHX40Q8IX18 779 aaKnown RBP11.49□□□□□ -0.57
HIF3A-205ENST00000377670 PBXIP1Q96AQ6 731 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 TNIP3Q96KP6 325 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 TMEM60Q9H2L4 133 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 ADAMTS1Q9UHI8 967 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 BCL9O00512 1426 aa11.49□□□□□ -0.57
HIF3A-205ENST00000377670 MYBP10242 640 aa11.48□□□□□ -0.57
HIF3A-205ENST00000377670 PPP4R4Q6NUP7 873 aa11.48□□□□□ -0.57
HIF3A-205ENST00000377670 BZW1Q7L1Q6 419 aaKnown RBP11.48□□□□□ -0.57
HIF3A-205ENST00000377670 SAAL1Q96ER3 474 aa11.48□□□□□ -0.57
HIF3A-205ENST00000377670 SP110Q9HB58 689 aa11.48□□□□□ -0.57
HIF3A-205ENST00000377670 NGRNQ9NPE2 291 aaKnown RBP11.48□□□□□ -0.57
HIF3A-205ENST00000377670 FBXO28Q9NVF7 368 aa11.48□□□□□ -0.57
HIF3A-205ENST00000377670 NFU1Q9UMS0 254 aa11.48□□□□□ -0.57
HIF3A-205ENST00000377670 PRG3Q9Y2Y8 225 aaPredicted RBP11.48□□□□□ -0.57
HIF3A-205ENST00000377670 CHUKO15111 745 aa11.48□□□□□ -0.57
HIF3A-205ENST00000377670 PRKCBP05771 671 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms