RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 ZNF333Q96JL9 665 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 PRIMPOLQ96LW4 560 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 MSTO1Q9BUK6 570 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 GCOM2Q9BZD3 368 aaPredicted RBP11.41□□□□□ -0.58
PDPN-203ENST00000376061 RNF208Q9H0X6 261 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 CDHR5Q9HBB8 845 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 AGO2Q9UKV8 859 aaKnown RBP11.41□□□□□ -0.58
PDPN-203ENST00000376061 OGDHLQ9ULD0 1010 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 GINS2Q9Y248 185 aa11.41□□□□□ -0.58
PDPN-203ENST00000376061 ITIH6Q6UXX5 1313 aa11.4□□□□□ -0.58
PDPN-203ENST00000376061 A0A0U1RQG5 324 aaPredicted RBP11.4□□□□□ -0.59
PDPN-203ENST00000376061 A0A1W2PQC6 194 aa11.4□□□□□ -0.59
PDPN-203ENST00000376061 KIAA0391O15091 583 aaKnown RBP11.4□□□□□ -0.59
PDPN-203ENST00000376061 EXTL3O43909 919 aa11.4□□□□□ -0.59
PDPN-203ENST00000376061 FAM189A1O60320 539 aa11.4□□□□□ -0.59
PDPN-203ENST00000376061 PTMAP06454 111 aaKnown RBP11.4□□□□□ -0.59
PDPN-203ENST00000376061 TRIM49P0CI25 452 aa11.4□□□□□ -0.59
PDPN-203ENST00000376061 TRIM49CP0CI26 452 aa11.4□□□□□ -0.59
PDPN-203ENST00000376061 HARSP12081 509 aaKnown RBP11.4□□□□□ -0.59
PDPN-203ENST00000376061 MATR3P43243 847 aaKnown RBP eCLIP11.4□□□□□ -0.59
PDPN-203ENST00000376061 MCL1Q07820 350 aa11.4□□□□□ -0.59
PDPN-203ENST00000376061 NOLC1Q14978 699 aaKnown RBP eCLIP11.4□□□□□ -0.59
PDPN-203ENST00000376061 SNX17Q15036 470 aa11.4□□□□□ -0.59
PDPN-203ENST00000376061 SYCP1Q15431 976 aa11.4□□□□□ -0.59
PDPN-203ENST00000376061 PTGISQ16647 500 aa11.4□□□□□ -0.59
PDPN-203ENST00000376061 ZNF568Q3ZCX4 644 aa11.4□□□□□ -0.59
PDPN-203ENST00000376061 ZBTB41Q5SVQ8 909 aa11.4□□□□□ -0.59
PDPN-203ENST00000376061 FKBP15Q5T1M5 1219 aa11.4□□□□□ -0.59
PDPN-203ENST00000376061 EEF1DP3Q658K8 133 aa11.4□□□□□ -0.59
PDPN-203ENST00000376061 INTS8Q75QN2 995 aaKnown RBP11.4□□□□□ -0.59
PDPN-203ENST00000376061 RPAINQ86UA6 219 aa11.4□□□□□ -0.59
PDPN-203ENST00000376061 ZNF710Q8N1W2 664 aa11.4□□□□□ -0.59
PDPN-203ENST00000376061 NME8Q8N427 588 aa11.4□□□□□ -0.59
PDPN-203ENST00000376061 SLC43A3Q8NBI5 491 aa11.4□□□□□ -0.59
PDPN-203ENST00000376061 RDH13Q8NBN7 331 aa11.4□□□□□ -0.59
PDPN-203ENST00000376061 PLEKHO2Q8TD55 490 aa11.4□□□□□ -0.59
PDPN-203ENST00000376061 TMEM40Q8WWA1 233 aa11.4□□□□□ -0.59
PDPN-203ENST00000376061 VTI1AQ96AJ9 217 aa11.4□□□□□ -0.59
PDPN-203ENST00000376061 ERGIC2Q96RQ1 377 aa11.4□□□□□ -0.59
PDPN-203ENST00000376061 FAM213AQ9BRX8 229 aa11.4□□□□□ -0.59
PDPN-203ENST00000376061 CDT1Q9H211 546 aa11.4□□□□□ -0.59
PDPN-203ENST00000376061 PDZD7Q9H5P4 517 aa11.4□□□□□ -0.59
PDPN-203ENST00000376061 PTPRHQ9HD43 1115 aa11.4□□□□□ -0.59
PDPN-203ENST00000376061 STARD7Q9NQZ5 370 aa11.4□□□□□ -0.59
PDPN-203ENST00000376061 TRMT13Q9NUP7 481 aaKnown RBP11.4□□□□□ -0.59
PDPN-203ENST00000376061 TNFSF13BQ9Y275 285 aa11.4□□□□□ -0.59
PDPN-203ENST00000376061 TANC1Q9C0D5 1861 aa11.39□□□□□ -0.59
PDPN-203ENST00000376061 CITO14578 2027 aa11.39□□□□□ -0.59
PDPN-203ENST00000376061 GOLGA6L6A8MZA4 724 aa11.39□□□□□ -0.59
PDPN-203ENST00000376061 CLDN3O15551 220 aa11.39□□□□□ -0.59
PDPN-203ENST00000376061 ERLIN2O94905 339 aa11.39□□□□□ -0.59
PDPN-203ENST00000376061 AFPP02771 609 aaKnown RBP11.39□□□□□ -0.59
PDPN-203ENST00000376061 RPLP2P05387 115 aaKnown RBP11.39□□□□□ -0.59
PDPN-203ENST00000376061 KRT13P13646 458 aa11.39□□□□□ -0.59
PDPN-203ENST00000376061 ARF4P18085 180 aaPredicted RBP11.39□□□□□ -0.59
PDPN-203ENST00000376061 FGFR4P22455 802 aa11.39□□□□□ -0.59
PDPN-203ENST00000376061 EIF4BP23588 611 aaKnown RBP11.39□□□□□ -0.59
PDPN-203ENST00000376061 CRYBB1P53674 252 aaPredicted RBP11.39□□□□□ -0.59
PDPN-203ENST00000376061 CYP24A1Q07973 514 aa11.39□□□□□ -0.59
PDPN-203ENST00000376061 KCNH2Q12809 1159 aa11.39□□□□□ -0.59
PDPN-203ENST00000376061 TBX2Q13207 712 aaPredicted RBP11.39□□□□□ -0.59
PDPN-203ENST00000376061 PKN2Q16513 984 aaKnown RBP11.39□□□□□ -0.59
PDPN-203ENST00000376061 TRIM71Q2Q1W2 868 aaKnown RBP11.39□□□□□ -0.59
PDPN-203ENST00000376061 C1orf220Q5T0J3 134 aa11.39□□□□□ -0.59
PDPN-203ENST00000376061 TCERG1LQ5VWI1 586 aa11.39□□□□□ -0.59
PDPN-203ENST00000376061 CRELD2Q6UXH1 353 aaPredicted RBP11.39□□□□□ -0.59
PDPN-203ENST00000376061 ZBTB33Q86T24 672 aa11.39□□□□□ -0.59
PDPN-203ENST00000376061 RSPH3Q86UC2 560 aa11.39□□□□□ -0.59
PDPN-203ENST00000376061 CDR2LQ86X02 465 aaPredicted RBP11.39□□□□□ -0.59
PDPN-203ENST00000376061 CCDC155Q8N6L0 562 aa11.39□□□□□ -0.59
PDPN-203ENST00000376061 DHX38Q92620 1227 aaKnown RBP11.39□□□□□ -0.59
PDPN-203ENST00000376061 CPB2Q96IY4 423 aa11.39□□□□□ -0.59
PDPN-203ENST00000376061 CELF4Q9BZC1 486 aaKnown RBP11.39□□□□□ -0.59
PDPN-203ENST00000376061 SENP6Q9GZR1 1112 aaPredicted RBP11.39□□□□□ -0.59
PDPN-203ENST00000376061 CRISPLD2Q9H0B8 497 aa11.39□□□□□ -0.59
PDPN-203ENST00000376061 KIAA1586Q9HCI6 787 aa11.39□□□□□ -0.59
PDPN-203ENST00000376061 IMPACTQ9P2X3 320 aa11.39□□□□□ -0.59
PDPN-203ENST00000376061 SIK3Q9Y2K2 1263 aa11.39□□□□□ -0.59
PDPN-203ENST00000376061 TRPV2Q9Y5S1 764 aa11.39□□□□□ -0.59
PDPN-203ENST00000376061 CDY2AQ9Y6F7 541 aa11.39□□□□□ -0.59
PDPN-203ENST00000376061 PDCD11Q14690 1871 aaKnown RBP11.38□□□□□ -0.59
PDPN-203ENST00000376061 M0QZ92 97 aa11.38□□□□□ -0.59
PDPN-203ENST00000376061 OGTO15294 1046 aa11.38□□□□□ -0.59
PDPN-203ENST00000376061 B4GALT4O60513 344 aa11.38□□□□□ -0.59
PDPN-203ENST00000376061 CTSHP09668 335 aa11.38□□□□□ -0.59
PDPN-203ENST00000376061 SFPQP23246 707 aaKnown RBP eCLIP11.38□□□□□ -0.59
PDPN-203ENST00000376061 ACOT2P49753 483 aa11.38□□□□□ -0.59
PDPN-203ENST00000376061 KLK7P49862 253 aa11.38□□□□□ -0.59
PDPN-203ENST00000376061 VAMP7P51809 220 aa11.38□□□□□ -0.59
PDPN-203ENST00000376061 MCCD1P59942 119 aaPredicted RBP11.38□□□□□ -0.59
PDPN-203ENST00000376061 DLG4P78352 724 aa11.38□□□□□ -0.59
PDPN-203ENST00000376061 MGAT3Q09327 533 aa11.38□□□□□ -0.59
PDPN-203ENST00000376061 PTK7Q13308 1070 aa11.38□□□□□ -0.59
PDPN-203ENST00000376061 HSP90AA2PQ14568 343 aaPredicted RBP11.38□□□□□ -0.59
PDPN-203ENST00000376061 PCBP1Q15365 356 aaKnown RBP eCLIP11.38□□□□□ -0.59
PDPN-203ENST00000376061 CATSPER4Q7RTX7 472 aa11.38□□□□□ -0.59
PDPN-203ENST00000376061 CCDC186Q7Z3E2 898 aa11.38□□□□□ -0.59
PDPN-203ENST00000376061 TMC2Q8TDI7 906 aa11.38□□□□□ -0.59
PDPN-203ENST00000376061 MFSD14AQ96MC6 490 aa11.38□□□□□ -0.59
PDPN-203ENST00000376061 TCHPQ9BT92 498 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms