RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 CHRNDQ07001 517 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 SCYL2Q6P3W7 929 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 FOXP4Q8IVH2 680 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-204ENST00000375290 FAF2Q96CS3 445 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 BSDC1Q9NW68 430 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-204ENST00000375290 IRAK4Q9NWZ3 460 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 ENOPH1Q9UHY7 261 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 SNX24Q9Y343 169 aa10.78□□□□□ -0.68
PTCH1-204ENST00000375290 RGS2P41220 211 aa10.77□□□□□ -0.68
PTCH1-204ENST00000375290 SCTRP47872 440 aa10.77□□□□□ -0.68
PTCH1-204ENST00000375290 CDC42EP1Q00587 391 aa10.77□□□□□ -0.68
PTCH1-204ENST00000375290 SLFN13Q68D06 897 aa10.77□□□□□ -0.68
PTCH1-204ENST00000375290 MAPKAPK5Q8IW41 473 aa10.77□□□□□ -0.68
PTCH1-204ENST00000375290 DACT3Q96B18 629 aaPredicted RBP10.77□□□□□ -0.68
PTCH1-204ENST00000375290 STAP1Q9ULZ2 295 aa10.77□□□□□ -0.68
PTCH1-204ENST00000375290 HEATR6Q6AI08 1181 aaKnown RBP10.77□□□□□ -0.68
PTCH1-204ENST00000375290 NUP85Q9BW27 656 aa10.77□□□□□ -0.68
PTCH1-204ENST00000375290 USP27XA6NNY8 438 aa10.77□□□□□ -0.68
PTCH1-204ENST00000375290 BBOX1O75936 387 aa10.77□□□□□ -0.68
PTCH1-204ENST00000375290 KRT14P02533 472 aa10.77□□□□□ -0.68
PTCH1-204ENST00000375290 GRM4Q14833 912 aa10.77□□□□□ -0.68
PTCH1-204ENST00000375290 SLC26A7Q8TE54 656 aa10.77□□□□□ -0.68
PTCH1-204ENST00000375290 NQO1P15559 274 aaKnown RBP10.77□□□□□ -0.69
PTCH1-204ENST00000375290 TRIM28Q13263 835 aaKnown RBP10.77□□□□□ -0.69
PTCH1-204ENST00000375290 PLA2G12BQ9BX93 195 aa10.77□□□□□ -0.69
PTCH1-204ENST00000375290 KRT82Q9NSB4 513 aa10.77□□□□□ -0.69
PTCH1-204ENST00000375290 PTPRUQ92729 1446 aa10.77□□□□□ -0.69
PTCH1-204ENST00000375290 GFPT1Q06210 699 aaPredicted RBP10.77□□□□□ -0.69
PTCH1-204ENST00000375290 CC2D2BQ6DHV5 1058 aa10.77□□□□□ -0.69
PTCH1-204ENST00000375290 MMS19Q96T76 1030 aa10.77□□□□□ -0.69
PTCH1-204ENST00000375290 ZCCHC17Q9NP64 241 aaKnown RBP10.77□□□□□ -0.69
PTCH1-204ENST00000375290 SLC24A2Q9UI40 661 aa10.77□□□□□ -0.69
PTCH1-204ENST00000375290 TRPC5OSA6NMA1 111 aa10.77□□□□□ -0.69
PTCH1-204ENST00000375290 TBC1D4O60343 1298 aa10.77□□□□□ -0.69
PTCH1-204ENST00000375290 SHC4Q6S5L8 630 aa10.77□□□□□ -0.69
PTCH1-204ENST00000375290 CALN1Q9BXU9 219 aa10.77□□□□□ -0.69
PTCH1-204ENST00000375290 ESYT2A0FGR8 921 aa10.77□□□□□ -0.69
PTCH1-204ENST00000375290 MRPS15P82914 257 aaKnown RBP10.77□□□□□ -0.69
PTCH1-204ENST00000375290 INAQ16352 499 aa10.77□□□□□ -0.69
PTCH1-204ENST00000375290 TMEM154Q6P9G4 183 aa10.77□□□□□ -0.69
PTCH1-204ENST00000375290 PALB2Q86YC2 1186 aa10.77□□□□□ -0.69
PTCH1-204ENST00000375290 PGM2Q96G03 612 aa10.77□□□□□ -0.69
PTCH1-204ENST00000375290 GINM1Q9NU53 330 aa10.77□□□□□ -0.69
PTCH1-204ENST00000375290 FBLN1P23142 703 aa10.77□□□□□ -0.69
PTCH1-204ENST00000375290 PRKAA2P54646 552 aa10.77□□□□□ -0.69
PTCH1-204ENST00000375290 PASD1Q8IV76 773 aa10.77□□□□□ -0.69
PTCH1-204ENST00000375290 ARHGEF26Q96DR7 871 aa10.77□□□□□ -0.69
PTCH1-204ENST00000375290 APPL1Q9UKG1 709 aa10.77□□□□□ -0.69
PTCH1-204ENST00000375290 RABL6Q3YEC7 729 aaPredicted RBP10.77□□□□□ -0.69
PTCH1-204ENST00000375290 RDH13Q8NBN7 331 aa10.77□□□□□ -0.69
PTCH1-204ENST00000375290 SMCR8Q8TEV9 937 aaPredicted RBP10.77□□□□□ -0.69
PTCH1-204ENST00000375290 SH3TC2Q8TF17 1288 aa10.77□□□□□ -0.69
PTCH1-204ENST00000375290 GLG1Q92896 1179 aa10.77□□□□□ -0.69
PTCH1-204ENST00000375290 SEPT10Q9P0V9 454 aa10.77□□□□□ -0.69
PTCH1-204ENST00000375290 VPS9D1Q9Y2B5 631 aa10.77□□□□□ -0.69
PTCH1-204ENST00000375290 TSC22D4Q9Y3Q8 395 aa10.77□□□□□ -0.69
PTCH1-204ENST00000375290 TRMT1LQ7Z2T5 733 aaKnown RBP10.76□□□□□ -0.69
PTCH1-204ENST00000375290 CD302Q8IX05 232 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 SCFD1Q8WVM8 642 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 C2orf40Q9H1Z8 148 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 SAP30BPQ9UHR5 308 aaKnown RBP10.76□□□□□ -0.69
PTCH1-204ENST00000375290 FBXO2Q9UK22 296 aaPredicted RBP10.76□□□□□ -0.69
PTCH1-204ENST00000375290 COPAP53621 1224 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 NAA20P61599 178 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 USH1GQ495M9 461 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 BSPRYQ5W0U4 402 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 RBM15Q96T37 977 aaKnown RBP eCLIP10.76□□□□□ -0.69
PTCH1-204ENST00000375290 SENP7Q9BQF6 1050 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 ZMYND8Q9ULU4 1186 aaPredicted RBP10.76□□□□□ -0.69
PTCH1-204ENST00000375290 LARGE1O95461 756 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 ROR1Q01973 937 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 COASYQ13057 564 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 ZBED8Q8IZ13 594 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 CALML6Q8TD86 181 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 NGLY1Q96IV0 654 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 NRDE2Q9H7Z3 1164 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 PRDM16Q9HAZ2 1276 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 APEX2Q9UBZ4 518 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 E2F6O75461 281 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 ABCB5Q2M3G0 1257 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 DLG3Q92796 817 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 ANO3Q9BYT9 981 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 ANGPT2O15123 496 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 SASH1O94885 1247 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 PTPN4P29074 926 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 STIP1P31948 543 aaKnown RBP10.76□□□□□ -0.69
PTCH1-204ENST00000375290 EPS8Q12929 822 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 MAPK6Q16659 721 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 BBS9Q3SYG4 887 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 DAGLBQ8NCG7 672 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 PLEKHA4Q9H4M7 779 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 TUBGCP4Q9UGJ1 667 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 SESN1Q9Y6P5 492 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 CCND2P30279 289 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 RXRGP48443 463 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 FAM47AQ5JRC9 791 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 PATL1Q86TB9 770 aaKnown RBP10.76□□□□□ -0.69
PTCH1-204ENST00000375290 CFAP36Q96G28 342 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 C17orf75Q9HAS0 396 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 ANLNQ9NQW6 1124 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms