RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 KIF20AO95235 890 aa16.43■□□□□ 0.22
HSPG2-201ENST00000374673 ITGA4P13612 1032 aa16.43■□□□□ 0.22
HSPG2-201ENST00000374673 IBSPP21815 317 aaPredicted RBP16.43■□□□□ 0.22
HSPG2-201ENST00000374673 HOXD13P35453 343 aa16.43■□□□□ 0.22
HSPG2-201ENST00000374673 SMAD3P84022 425 aaKnown RBP16.43■□□□□ 0.22
HSPG2-201ENST00000374673 COBLL1Q53SF7 1204 aa16.43■□□□□ 0.22
HSPG2-201ENST00000374673 SLFN12LQ6IEE8 588 aa16.43■□□□□ 0.22
HSPG2-201ENST00000374673 FAM117BQ6P1L5 589 aa16.43■□□□□ 0.22
HSPG2-201ENST00000374673 AGMOQ6ZNB7 445 aa16.43■□□□□ 0.22
HSPG2-201ENST00000374673 SYCP3Q8IZU3 236 aa16.43■□□□□ 0.22
HSPG2-201ENST00000374673 RSPH1Q8WYR4 309 aa16.43■□□□□ 0.22
HSPG2-201ENST00000374673 RAD9AQ99638 391 aa16.43■□□□□ 0.22
HSPG2-201ENST00000374673 TCHPQ9BT92 498 aa16.43■□□□□ 0.22
HSPG2-201ENST00000374673 ZBED2Q9BTP6 218 aa16.43■□□□□ 0.22
HSPG2-201ENST00000374673 HAPLN2Q9GZV7 340 aa16.43■□□□□ 0.22
HSPG2-201ENST00000374673 NXF3Q9H4D5 531 aaKnown RBP16.43■□□□□ 0.22
HSPG2-201ENST00000374673 KIAA1468Q9P260 1216 aa16.43■□□□□ 0.22
HSPG2-201ENST00000374673 MAN1B1Q9UKM7 699 aa16.43■□□□□ 0.22
HSPG2-201ENST00000374673 GDAQ9Y2T3 454 aa16.43■□□□□ 0.22
HSPG2-201ENST00000374673 INSL6Q9Y581 213 aa16.43■□□□□ 0.22
HSPG2-201ENST00000374673 PCDHA11Q9Y5I1 949 aa16.43■□□□□ 0.22
HSPG2-201ENST00000374673 TDRD15B5MCY1 1934 aaKnown RBP16.43■□□□□ 0.22
HSPG2-201ENST00000374673 TISP43B9A030 160 aa16.42■□□□□ 0.22
HSPG2-201ENST00000374673 TLL1O43897 1013 aa16.42■□□□□ 0.22
HSPG2-201ENST00000374673 GRM5P41594 1212 aa16.42■□□□□ 0.22
HSPG2-201ENST00000374673 SNRPFP62306 86 aaKnown RBP16.42■□□□□ 0.22
HSPG2-201ENST00000374673 RAB30Q15771 203 aa16.42■□□□□ 0.22
HSPG2-201ENST00000374673 KNOP1Q1ED39 458 aaKnown RBP16.42■□□□□ 0.22
HSPG2-201ENST00000374673 ZBTB33Q86T24 672 aa16.42■□□□□ 0.22
HSPG2-201ENST00000374673 GUF1Q8N442 669 aaKnown RBP16.42■□□□□ 0.22
HSPG2-201ENST00000374673 TRIML1Q8N9V2 468 aa16.42■□□□□ 0.22
HSPG2-201ENST00000374673 RNF169Q8NCN4 708 aa16.42■□□□□ 0.22
HSPG2-201ENST00000374673 SP7Q8TDD2 431 aaPredicted RBP16.42■□□□□ 0.22
HSPG2-201ENST00000374673 LPPQ93052 612 aa16.42■□□□□ 0.22
HSPG2-201ENST00000374673 PBX4Q9BYU1 374 aa16.42■□□□□ 0.22
HSPG2-201ENST00000374673 TMEM117Q9H0C3 514 aa16.42■□□□□ 0.22
HSPG2-201ENST00000374673 GBP3Q9H0R5 595 aa16.42■□□□□ 0.22
HSPG2-201ENST00000374673 IKZF4Q9H2S9 585 aa16.42■□□□□ 0.22
HSPG2-201ENST00000374673 RSAD1Q9HA92 442 aa16.42■□□□□ 0.22
HSPG2-201ENST00000374673 UBN1Q9NPG3 1134 aa16.42■□□□□ 0.22
HSPG2-201ENST00000374673 HES2Q9Y543 173 aa16.42■□□□□ 0.22
HSPG2-201ENST00000374673 KIAA1671Q9BY89 1806 aa16.42■□□□□ 0.22
HSPG2-201ENST00000374673 PDCD11Q14690 1871 aaKnown RBP16.42■□□□□ 0.22
HSPG2-201ENST00000374673 NLRC5Q86WI3 1866 aa16.42■□□□□ 0.22
HSPG2-201ENST00000374673 TRIP11Q15643 1979 aa16.41■□□□□ 0.22
HSPG2-201ENST00000374673 A0A0B4J269 797 aa16.41■□□□□ 0.22
HSPG2-201ENST00000374673 MEIS3P2A8K0S8 358 aa16.41■□□□□ 0.22
HSPG2-201ENST00000374673 INPPL1O15357 1258 aa16.41■□□□□ 0.22
HSPG2-201ENST00000374673 TGFB1I1O43294 461 aa16.41■□□□□ 0.22
HSPG2-201ENST00000374673 FGFR1P11362 822 aa16.41■□□□□ 0.22
HSPG2-201ENST00000374673 GARTP22102 1010 aa16.41■□□□□ 0.22
HSPG2-201ENST00000374673 MATR3P43243 847 aaKnown RBP eCLIP16.41■□□□□ 0.22
HSPG2-201ENST00000374673 RABGGTBP53611 331 aa16.41■□□□□ 0.22
HSPG2-201ENST00000374673 MORC3Q14149 939 aa16.41■□□□□ 0.22
HSPG2-201ENST00000374673 CLLU1OSQ5K130 101 aa16.41■□□□□ 0.22
HSPG2-201ENST00000374673 NELFCDQ8IXH7 590 aa16.41■□□□□ 0.22
HSPG2-201ENST00000374673 CMTR2Q8IYT2 770 aaKnown RBP16.41■□□□□ 0.22
HSPG2-201ENST00000374673 CEP120Q8N960 986 aa16.41■□□□□ 0.22
HSPG2-201ENST00000374673 YME1L1Q96TA2 773 aa16.41■□□□□ 0.22
HSPG2-201ENST00000374673 RNF39Q9H2S5 420 aa16.41■□□□□ 0.22
HSPG2-201ENST00000374673 SNTG2Q9NY99 539 aa16.41■□□□□ 0.22
HSPG2-201ENST00000374673 CGNQ9P2M7 1197 aaKnown RBP16.41■□□□□ 0.22
HSPG2-201ENST00000374673 GIT1Q9Y2X7 761 aa16.41■□□□□ 0.22
HSPG2-201ENST00000374673 ANK1P16157 1881 aa16.4■□□□□ 0.22
HSPG2-201ENST00000374673 OGTO15294 1046 aa16.4■□□□□ 0.22
HSPG2-201ENST00000374673 FAM189A1O60320 539 aa16.4■□□□□ 0.22
HSPG2-201ENST00000374673 OFD1O75665 1012 aa16.4■□□□□ 0.22
HSPG2-201ENST00000374673 HARSP12081 509 aaKnown RBP16.4■□□□□ 0.22
HSPG2-201ENST00000374673 ADSSP30520 456 aa16.4■□□□□ 0.22
HSPG2-201ENST00000374673 GATMP50440 423 aa16.4■□□□□ 0.22
HSPG2-201ENST00000374673 KYAT1Q16773 422 aa16.4■□□□□ 0.22
HSPG2-201ENST00000374673 RBM43Q6ZSC3 357 aaKnown RBP16.4■□□□□ 0.22
HSPG2-201ENST00000374673 THNSL1Q8IYQ7 743 aa16.4■□□□□ 0.22
HSPG2-201ENST00000374673 SMYD4Q8IYR2 804 aaPredicted RBP16.4■□□□□ 0.22
HSPG2-201ENST00000374673 ABI1Q8IZP0 508 aa16.4■□□□□ 0.22
HSPG2-201ENST00000374673 HELQQ8TDG4 1101 aa16.4■□□□□ 0.22
HSPG2-201ENST00000374673 POMGNT1Q8WZA1 660 aa16.4■□□□□ 0.22
HSPG2-201ENST00000374673 CASD1Q96PB1 797 aa16.4■□□□□ 0.22
HSPG2-201ENST00000374673 MSTO1Q9BUK6 570 aa16.4■□□□□ 0.22
HSPG2-201ENST00000374673 CCDC94Q9BW85 323 aaPredicted RBP16.4■□□□□ 0.22
HSPG2-201ENST00000374673 APOL6Q9BWW8 343 aa16.4■□□□□ 0.22
HSPG2-201ENST00000374673 KCTD10Q9H3F6 313 aa16.4■□□□□ 0.22
HSPG2-201ENST00000374673 TYW1Q9NV66 732 aaKnown RBP16.4■□□□□ 0.22
HSPG2-201ENST00000374673 MSRAQ9UJ68 235 aa16.4■□□□□ 0.22
HSPG2-201ENST00000374673 TBKBP1A7MCY6 615 aa16.39■□□□□ 0.21
HSPG2-201ENST00000374673 PDXKO00764 312 aa16.39■□□□□ 0.21
HSPG2-201ENST00000374673 KIAA0391O15091 583 aaKnown RBP16.39■□□□□ 0.21
HSPG2-201ENST00000374673 RECQL4O94761 1208 aa16.39■□□□□ 0.21
HSPG2-201ENST00000374673 BMP6P22004 513 aa16.39■□□□□ 0.21
HSPG2-201ENST00000374673 AKAP5P24588 427 aa16.39■□□□□ 0.21
HSPG2-201ENST00000374673 PBX2P40425 430 aa16.39■□□□□ 0.21
HSPG2-201ENST00000374673 PPP1R2P41236 205 aa16.39■□□□□ 0.21
HSPG2-201ENST00000374673 PRCPP42785 496 aa16.39■□□□□ 0.21
HSPG2-201ENST00000374673 ARMCX5Q6P1M9 558 aa16.39■□□□□ 0.21
HSPG2-201ENST00000374673 GLB1LQ6UWU2 654 aa16.39■□□□□ 0.21
HSPG2-201ENST00000374673 HS2ST1Q7LGA3 356 aa16.39■□□□□ 0.21
HSPG2-201ENST00000374673 C12orf56Q8IXR9 622 aa16.39■□□□□ 0.21
HSPG2-201ENST00000374673 GOLGA5Q8TBA6 731 aa16.39■□□□□ 0.21
HSPG2-201ENST00000374673 ACAP3Q96P50 834 aa16.39■□□□□ 0.21
HSPG2-201ENST00000374673 CBWD1Q9BRT8 395 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms